BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0038.0001.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0459 [S] COG4395 Uncharacterized protein conserved in bacteri...   106   1e-23

>RSc0459 [S] COG4395 Uncharacterized protein conserved in bacteria Rso
           Ralstonia solanacearum
          Length = 356

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 69/84 (82%), Gaps = 2/84 (2%)

Query: 1   MFAELRLQIQERGAASNQTDVVSLDAEVLGVETVGNDYLASVKFFGFIKEDPTASPAQ-F 59
           MFAE+++ + +RG   N+TDVVS++AE+LG+ET   +YLASV+F G I+E+ T++PAQ F
Sbjct: 273 MFAEIKMDLTDRGTVPNKTDVVSVEAELLGIETHPTEYLASVRFSGMIREE-TSAPAQPF 331

Query: 60  AEIWNLSKPAAGQGGWVLAGIQQI 83
           AE+WNL+KP  G GGWVLAGIQQ+
Sbjct: 332 AEVWNLTKPTQGSGGWVLAGIQQL 355