BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0068.p         (119 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1176 [R] COG4172 ABC-type uncharacterized transport system, d...   111   5e-25
mlr1190 Non COG                                                       104   5e-23
mll5490 Non COG                                                       104   6e-23
AGl685 [R] COG1123 ATPase components of various ABC-type transpo...   103   8e-23
AGl3112 [R] COG1123 ATPase components of various ABC-type transp...   100   1e-21

>RSc1176 [R] COG4172 ABC-type uncharacterized transport system, duplicated
           ATPase component Rso Ralstonia solanacearum
          Length = 551

 Score =  111 bits (277), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 57/99 (57%), Positives = 74/99 (74%), Gaps = 5/99 (5%)

Query: 5   LLEVNNLTVRFGD-----TVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQLNQDAR 59
           LL +++L+VRF          V  VSF +  GE+FALVGESGSGKTV++L++M+L  DA 
Sbjct: 17  LLRLDDLSVRFEAEHNEWIEAVRHVSFDLHAGERFALVGESGSGKTVTALSIMRLLADAH 76

Query: 60  YEGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTAL 98
           Y G IL +G+D+LA SERQM+ +RG DVAM+FQEPMTAL
Sbjct: 77  YSGRILFEGRDLLAASERQMRGLRGADVAMVFQEPMTAL 115


>mlr1190 Non COG
          Length = 540

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/96 (51%), Positives = 70/96 (72%), Gaps = 1/96 (1%)

Query: 4  ALLEVNNLTVRFGDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQ-LNQDARYEG 62
          +LLE++NL++  GDT ++  +  ++APGE   LVGESGSGK++++L VMQ L   AR  G
Sbjct: 2  SLLEIDNLSLTIGDTQILKDMELSVAPGEVMGLVGESGSGKSMTALTVMQLLPHAARASG 61

Query: 63 SILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTAL 98
           +  DG D+LA +E QM  +RG+D+ M+FQEPMTAL
Sbjct: 62 RVTFDGIDILAATEDQMCALRGDDIGMVFQEPMTAL 97


>mll5490 Non COG
          Length = 543

 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 72/103 (69%), Gaps = 7/103 (6%)

Query: 3   AALLEVNNLTVRF----GDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQL---N 55
           A LL V +L+V F    G +V VD +SF IA GE  ALVGESGSGK+VS+L+V++L    
Sbjct: 4   APLLSVQDLSVAFSQGGGQSVAVDHISFDIAKGETVALVGESGSGKSVSALSVLKLLPYP 63

Query: 56  QDARYEGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTAL 98
             +   G IL  G D+LA SERQ++QVRGN + MIFQEPMT+L
Sbjct: 64  SASHPSGKILFQGADLLAMSERQLRQVRGNKITMIFQEPMTSL 106


>AGl685 [R] COG1123 ATPase components of various ABC-type transport
           systems, contain duplicated ATPase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 606

 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 3/98 (3%)

Query: 4   ALLEVNNLTVRFGDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQLNQ--DARY- 60
           ALL V  L+V FGD+ VVD +SF + PG   A+VGESGSGK+V+SL+ M+L     A Y 
Sbjct: 8   ALLSVEGLSVEFGDSRVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMGATYP 67

Query: 61  EGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTAL 98
            G IL +G+D+L  S+++M+ +RG ++AMIFQEPMT+L
Sbjct: 68  TGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSL 105


>AGl3112 [R] COG1123 ATPase components of various ABC-type transport
           systems, contain duplicated ATPase Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 611

 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 54/101 (53%), Positives = 74/101 (73%), Gaps = 6/101 (5%)

Query: 4   ALLEVNNLTVRF----GDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQL--NQD 57
           A+L V NLT  F    G   VV  +SF + PGE  A+VGESGSGK+V+SL++M+L   + 
Sbjct: 14  AVLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRES 73

Query: 58  ARYEGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTAL 98
           +R +G ILL G+++L+ SE  M++VRGN+VAMIFQEPMT+L
Sbjct: 74  SRVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSL 114



 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 16/109 (14%)

Query: 5   LLEVNNLTVRF-----------GDTVVVDRVSFAIAPGEKFALVGESGSGKTVSSLAVMQ 53
           +L+V  LT RF           G    V+ VSF +  GE  +LVGESG GK+ +  A+M+
Sbjct: 311 VLKVEGLTKRFDIHSGLLGRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIMR 370

Query: 54  LNQ-DARYEGSILLDGQDVLAKSERQMQQVRGNDVAMIFQEPMTALXAR 101
           L + DA   GS++++G+++L   +  M+++R   V MIFQ+P  +L  R
Sbjct: 371 LIEPDA---GSVVVNGENILTLDKSGMREMR-KTVQMIFQDPFASLNPR 415