BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0066.p (261 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1174 [R] COG4174 ABC-type uncharacterized transport system, p... 378 e-105 mll5491 Non COG 345 8e-95 PA1809 [R] COG4174 ABC-type uncharacterized transport system, pe... 335 9e-92 BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, ... 330 2e-90 YPO1272 [R] COG4174 ABC-type uncharacterized transport system, p... 326 3e-89 >RSc1174 [R] COG4174 ABC-type uncharacterized transport system, permease component Rso Ralstonia solanacearum Length = 351 Score = 378 bits (971), Expect = e-105, Method: Compositional matrix adjust. Identities = 192/261 (73%), Positives = 228/261 (87%) Query: 1 MLKGFLTFDLGKSFYHHGDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTR 60 ML F FDLG+S++ H VW L+KSKLPVSISIGLWTF L+YLISVPLGIAKAVR G+R Sbjct: 91 MLGRFARFDLGESYFQHRSVWELIKSKLPVSISIGLWTFFLTYLISVPLGIAKAVRAGSR 150 Query: 61 FDTATTGLVLVGYSIPGFVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYL 120 FD ++ +VLVGY+IPGFVLGV LLVLF GG+F QWFP+RGLTSDNW LSL GK+TDYL Sbjct: 151 FDLVSSVIVLVGYAIPGFVLGVLLLVLFGGGTFFQWFPIRGLTSDNWGQLSLPGKVTDYL 210 Query: 121 WHITLPVTASVIGSFAVITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIP 180 WHI LP+TASV+GSFAVITMLT+N FLEEIRKQYVLTAR+KGLSERRVL+KH+FRNA+IP Sbjct: 211 WHIALPITASVVGSFAVITMLTKNAFLEEIRKQYVLTARSKGLSERRVLWKHIFRNAMIP 270 Query: 181 LVTGFPSAFIASFFAGSLLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVK 240 LVTGFP+AFI +FF GSLLIE LFSLDGMGL++YE+ ++RDYPVV+GTLY+FTLIGL + Sbjct: 271 LVTGFPAAFIGAFFTGSLLIEKLFSLDGMGLMSYEAVVQRDYPVVLGTLYVFTLIGLATR 330 Query: 241 LVGDLCYVWADPRVQFESLAK 261 L+ D+CYV DPR+ F ++ + Sbjct: 331 LISDVCYVLVDPRIHFGAIGR 351 >mll5491 Non COG Length = 364 Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 162/257 (63%), Positives = 205/257 (79%) Query: 1 MLKGFLTFDLGKSFYHHGDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTR 60 ML ++ FD G S++ V L+ K+PVSISIGLW LLSYLIS+PLGI KAV++GT Sbjct: 104 MLWNYIRFDFGNSYFRDISVLDLILEKMPVSISIGLWITLLSYLISIPLGIRKAVKDGTP 163 Query: 61 FDTATTGLVLVGYSIPGFVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYL 120 FD T+G+V+VGY+IPGF+ G+ L+VLFAGGSF WFPLRG+ SDNW+ LS +GKI DY Sbjct: 164 FDVWTSGVVIVGYAIPGFLFGIMLMVLFAGGSFWDWFPLRGIVSDNWDQLSWLGKIADYF 223 Query: 121 WHITLPVTASVIGSFAVITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIP 180 WH+TLP+TA V+ +FA T+LT+N+FLEEIRKQYV+TARAKGLSER+VLY HVFRNA++ Sbjct: 224 WHMTLPLTALVLSAFATTTLLTKNSFLEEIRKQYVVTARAKGLSERQVLYGHVFRNAMLI 283 Query: 181 LVTGFPSAFIASFFAGSLLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVK 240 ++ GFP AFI++FF GSLLIE +FSLDG+GLL + S + RDYPVV LY+F+L+GL V Sbjct: 284 VIAGFPGAFISAFFTGSLLIENIFSLDGLGLLGFRSVVERDYPVVFANLYIFSLLGLFVG 343 Query: 241 LVGDLCYVWADPRVQFE 257 L+ DL Y W DPR+ FE Sbjct: 344 LLSDLIYTWVDPRIDFE 360 >PA1809 [R] COG4174 ABC-type uncharacterized transport system, permease component Pae Pseudomonas aeruginosa Length = 360 Score = 335 bits (858), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 157/258 (60%), Positives = 206/258 (79%) Query: 1 MLKGFLTFDLGKSFYHHGDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTR 60 MLK +L D G+SF+ V L+ KLPVSIS+GLW+ L+ YL+S+PLGIAKAVR G+ Sbjct: 101 MLKNYLHLDFGQSFFRDAKVTDLIIEKLPVSISLGLWSTLIMYLVSIPLGIAKAVRHGSV 160 Query: 61 FDTATTGLVLVGYSIPGFVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYL 120 FD T+ ++VGY+IP F+ + L+VLFAGGS+ WFPLRGLTS+N++ LSL GK+ DY Sbjct: 161 FDIWTSSAIIVGYAIPAFLFAILLVVLFAGGSYWDWFPLRGLTSNNFDQLSLGGKVLDYF 220 Query: 121 WHITLPVTASVIGSFAVITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIP 180 WH+ LPVTA VIG+FA IT+LT+N+FL+EI KQYV+TARAKGL+ERRVLY HVFRNA++ Sbjct: 221 WHLALPVTALVIGNFATITLLTKNSFLDEIGKQYVVTARAKGLTERRVLYGHVFRNAMLL 280 Query: 181 LVTGFPSAFIASFFAGSLLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVK 240 ++ G P+A + FF GSLLIE +FSLDG+GLL++E+A+ RDYPVV GTL++FTL GLV+K Sbjct: 281 VIAGLPAALLGIFFTGSLLIEVIFSLDGLGLLSFEAAMNRDYPVVFGTLFIFTLFGLVMK 340 Query: 241 LVGDLCYVWADPRVQFES 258 L+ D+ Y DPR+ FE+ Sbjct: 341 LISDIVYTLVDPRIDFEN 358 >BMEI1936 [R] COG4174 ABC-type uncharacterized transport system, permease component Bme Brucella melitensis Length = 365 Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 151/257 (58%), Positives = 204/257 (79%) Query: 1 MLKGFLTFDLGKSFYHHGDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTR 60 ML ++ FD G+S++ V L+K K+PVSIS+GLW LSY+IS+PLGI KA+++G+R Sbjct: 105 MLWNYMRFDFGRSYFRDISVIDLIKEKMPVSISLGLWLTFLSYMISIPLGIRKAIKDGSR 164 Query: 61 FDTATTGLVLVGYSIPGFVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYL 120 FDT T+ ++++GY+IP F+ + L+V+FAGGSF WFPLRGLTS ++ ++ KI DYL Sbjct: 165 FDTWTSAVIIIGYAIPSFLFAILLIVVFAGGSFFDWFPLRGLTSPDFAQMTWFEKIKDYL 224 Query: 121 WHITLPVTASVIGSFAVITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIP 180 WH+ LPVTA V+ +FA T+LT+N+FLEEIRKQYV TARAKGL+E +VLY+HVFRNA++ Sbjct: 225 WHMVLPVTALVLSAFATTTLLTKNSFLEEIRKQYVTTARAKGLTENQVLYRHVFRNAMLI 284 Query: 181 LVTGFPSAFIASFFAGSLLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVK 240 ++ GFP AFI++FF GSLLIET+FSLDG+GLL Y+S I RDYPVV L++F+LIGL+V Sbjct: 285 VIAGFPGAFISAFFTGSLLIETIFSLDGLGLLGYQSVINRDYPVVFANLFIFSLIGLLVG 344 Query: 241 LVGDLCYVWADPRVQFE 257 L+ DL Y W DPR+ F+ Sbjct: 345 LLSDLTYTWIDPRIDFD 361 >YPO1272 [R] COG4174 ABC-type uncharacterized transport system, permease component Ype Yersinia pestis Length = 366 Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 151/257 (58%), Positives = 203/257 (78%) Query: 1 MLKGFLTFDLGKSFYHHGDVWTLVKSKLPVSISIGLWTFLLSYLISVPLGIAKAVREGTR 60 ML ++ FD G S + V +L+K LPVSIS+GLW+ L+ YL+S+PLGI KAVR GT Sbjct: 107 MLWRYVRFDFGDSLFRGESVMSLIKQSLPVSISLGLWSTLIIYLVSIPLGIKKAVRNGTA 166 Query: 61 FDTATTGLVLVGYSIPGFVLGVFLLVLFAGGSFVQWFPLRGLTSDNWESLSLMGKITDYL 120 FDT ++ L+++GY+IP F+ + L+VLF+GGS+ FPLRGL S NW++L KITDYL Sbjct: 167 FDTWSSTLIIIGYAIPSFLFAILLVVLFSGGSYFDLFPLRGLVSSNWDTLPWYSKITDYL 226 Query: 121 WHITLPVTASVIGSFAVITMLTRNTFLEEIRKQYVLTARAKGLSERRVLYKHVFRNALIP 180 WHITLPV A+VIG FA +TMLT+N+FL+EIRKQYV+TARAKGL E ++LY+HVFRNA++ Sbjct: 227 WHITLPVLATVIGGFATLTMLTKNSFLDEIRKQYVVTARAKGLPEEKILYRHVFRNAMLL 286 Query: 181 LVTGFPSAFIASFFAGSLLIETLFSLDGMGLLAYESAIRRDYPVVMGTLYLFTLIGLVVK 240 ++ GFP+ F++ FF GSLLIE +FSL+G+GLL Y++ I+RDYPV+ GTLY+FTLIGL++ Sbjct: 287 VIAGFPATFVSMFFTGSLLIEVMFSLNGLGLLGYDATIQRDYPVMFGTLYIFTLIGLLLN 346 Query: 241 LVGDLCYVWADPRVQFE 257 +V D+ Y DPR+ FE Sbjct: 347 IVSDITYTLVDPRIDFE 363