BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0057.p (209 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0603 Non COG 138 1e-32 VC1753 [S] COG2995 Uncharacterized paraquat-inducible protein A ... 110 2e-24 PM0267 [S] COG2995 Uncharacterized paraquat-inducible protein A ... 85 1e-16 YPO1702 [S] COG2995 Uncharacterized paraquat-inducible protein A... 84 2e-16 Z2880 [S] COG2995 Uncharacterized paraquat-inducible protein A E... 77 2e-14 >RSc0603 Non COG Length = 292 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/192 (42%), Positives = 112/192 (58%), Gaps = 1/192 (0%) Query: 5 PDL-IVCEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFVIAN 63 PD I CE CD +++ + E ARC RC +L R+ RL LLPL + LI++++AN Sbjct: 67 PDAWIACEHCDTLHRHEVIALDEEARCTRCGVKLYRNQTERLSVLLPLVVTGLIVYIVAN 126 Query: 64 VFPIVTIELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPGS 123 FPI ++ G TTL AV AL M A+LV TT LFP++ L VL LL+ + Sbjct: 127 AFPIAEMDGGGNRNATTLWNAVEALYNYDMPFAAVLVALTTGLFPLMYLVVLAPLLIARA 186 Query: 124 RRQRPPGFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSFGGLTVLL 183 R +R P L LR RPW MIE+FMLG +VALIK++++ + LW+F LTV + Sbjct: 187 RGRRHPSAALALRAAALIRPWAMIEIFMLGAVVALIKVAHMVSLEADTGLWAFAMLTVFM 246 Query: 184 TVVVSFNPRYLW 195 T+ +S + R W Sbjct: 247 TIALSIDLRPFW 258 >VC1753 [S] COG2995 Uncharacterized paraquat-inducible protein A Vch Vibrio cholerae Length = 434 Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 113/204 (55%), Gaps = 9/204 (4%) Query: 4 RPDLIVCEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFVIAN 63 + LI C+EC + P L Q + A+C RC L + + + + LTI LIL V++ Sbjct: 7 KNHLIGCDECGLITNVPLLSQAQTAQCPRCGHTLTQTPQKPYQTAVALTISCLILLVLSL 66 Query: 64 VFPIVTIELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPG- 122 FP ++ +QG++ + TL+ A L +A+L+ T +LFP + + +LL++ Sbjct: 67 TFPFMSFSVQGMTQEITLLNAAKMLGEFQNVLLAILLFTTVILFPALYITILLFVSFKAA 126 Query: 123 --SRRQRPPGFV----LLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSF 176 ++RQ + LL + + +PW M++VF++G+LV+LIK++++AEV G + W+F Sbjct: 127 QSTQRQLSSSEIQRAKLLCKTLLTVQPWLMVDVFLIGVLVSLIKIASLAEVAMGYSFWAF 186 Query: 177 GGLTVLLTVVVSFNPRYLWHLWEQ 200 +L+ VS RY W LW+ Sbjct: 187 CFFAMLVVKTVSLVDRY-W-LWQH 208 Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 13/200 (6%) Query: 6 DLIVCEECDAVYQ-RPTLGQREVARCLRCHAELERDTGR-RLEHLLPLTIGALILFVIAN 63 + + C C + RP ++ CLRC + L + L+ L + A+I ++ AN Sbjct: 228 NSVSCHTCQQINLLRP---DQKKPTCLRCGSRLHAYHPQLNLQWAWALLLAAIIFYIPAN 284 Query: 64 VFPIVTIELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPGS 123 ++P++ G S +++M V+ L G VA+++ ++ PM ++F L +L Sbjct: 285 LYPMMYTVSLGKSEGSSIMQGVILLWHLGSYPVAMVIFLASIFIPMAKMFALGWLYWQAG 344 Query: 124 R-----RQRPPGFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSFGG 178 + Q+ + + R+ + W MI++F++ ILV+L++L N+ + PGPA SF Sbjct: 345 KLNVFPEQQNLKRLKVYRVTEFIGRWSMIDIFVVAILVSLVQLHNLMAIYPGPAALSFAA 404 Query: 179 LTVLLTVVVS--FNPRYLWH 196 + VLLT++ + F+ R LWH Sbjct: 405 V-VLLTMLSAMVFDSRILWH 423 >PM0267 [S] COG2995 Uncharacterized paraquat-inducible protein A Pmu Pasteurella multocida Length = 418 Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 97/198 (48%), Gaps = 5/198 (2%) Query: 10 CEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFVIANVFPIVT 69 C EC + +++ A C RCH+ L +L+ I +I+ AN+ PI Sbjct: 221 CFECQYSFMHAMHDRQQRAICPRCHSTLHLSAHIKLQRTWATLIAGIIMIFPANLLPISV 280 Query: 70 IELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLM--PGSRRQR 127 + + G + TLM V++ G VA +V ++ P+ ++ ++LYLL+ R Sbjct: 281 VYVNGAPSADTLMSGVLSFIDMGSYFVAFIVFVASIFVPISKIMIMLYLLICVHFQLRHS 340 Query: 128 PPGFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSFGGLTVLLTVVV 187 + LL + W M+++F+L ++++L+ I + GPA + F G+ V LT++ Sbjct: 341 IKWQMRLLHFVHFVGRWSMLDLFVLALMMSLVTRGQIIDFSVGPAAFYF-GIAVFLTMIS 399 Query: 188 S--FNPRYLWHLWEQHQG 203 + F+ R LW ++++ Sbjct: 400 TSQFDSRLLWKIYDKQTA 417 Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 6/210 (2%) Query: 3 KRP--DLIVCEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFV 60 +RP +L C +CDAV PTL ++A C RCH ++ L + + LIL Sbjct: 7 QRPLHELACCSDCDAVVSFPTLQSEQLAECPRCHHVIKTTDRWSLHRCAMIALSILILMP 66 Query: 61 IANVFPIVTIELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLM 120 A FP+++I+L G D ++ G V + G A LV + P+ ++L L + Sbjct: 67 FALKFPLLSIDLLGTKIDASVWGGVWKMATQGYPYTAFLVFICAVFMPISFALLVLLLRL 126 Query: 121 PGSRRQRPPGFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSFGGLT 180 R +P LL + +PW M +V+++ + V + K+ A + L +F Sbjct: 127 SQLLRVKPRN---LLISLAHIKPWVMFDVYLVALAVTMFKVKEYATLEIDIYLIAFVFTA 183 Query: 181 VLLTVV-VSFNPRYLWHLWEQHQGSGEVRP 209 +L T++ + NP+ LW+ + Q S P Sbjct: 184 LLTTLLFIKLNPKELWNEFYPQQHSLNAIP 213 >YPO1702 [S] COG2995 Uncharacterized paraquat-inducible protein A Ype Yersinia pestis Length = 450 Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 11/201 (5%) Query: 10 CEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFVIANVFPIVT 69 C ECDA++ P LG + A C RC+A++ L L + L+L A P+++ Sbjct: 53 CCECDALFTLPPLGGNQTAYCPRCNAQITSGRDWSLTRLTAMACAMLLLIPFAFTEPLIS 112 Query: 70 IELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPGSR---RQ 126 I L G D +L+ + ++R G A +V L P+ F +LYL + GSR Sbjct: 113 IRLLGTRIDASLLAGIWQMSRQGDPITASMVAFCVLAAPVTLTFSILYLRI-GSRIGINL 171 Query: 127 RPPGFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSF-GGLTVLLTV 185 RP +L +++ + W M++++++G+ VA IK+ A+++PG L ++ + + Sbjct: 172 RP-----ILLILERLKEWVMLDIYLIGMAVACIKVKEYADIMPGTGLIAYLTLTLLSILT 226 Query: 186 VVSFNPRYLWH-LWEQHQGSG 205 +V N LW + Q Q G Sbjct: 227 LVHLNLEQLWERFYPQEQPPG 247 Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 8/193 (4%) Query: 9 VCEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFVIANVFPIV 68 VC C + G RC RCH L L+ I A++L + AN+ PI Sbjct: 254 VCLSCHYTGHPDSHG-----RCPRCHTPLRHRRRHSLQKTWAALIAAIVLLLPANLLPIS 308 Query: 69 TIELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPGSRRQRP 128 + G + T+ VV+L G +A +V ++L P ++ VL+ LL+ + + Sbjct: 309 IVYANGARIEDTIFSGVVSLASSGNFPIAAVVFIASVLVPFTKVIVLITLLLSIHLKTQH 368 Query: 129 P--GFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSFGGLTVLLTVV 186 + LLRL+ W M+++F++ ++++LI + GPA + FG +L + Sbjct: 369 SLKTRMRLLRLITWIGRWSMLDLFVIALMMSLINRDQLFSFTMGPAAFYFGSAVILTILA 428 Query: 187 VSF-NPRYLWHLW 198 V + + R +W + Sbjct: 429 VEWLDSRLIWDAY 441 >Z2880 [S] COG2995 Uncharacterized paraquat-inducible protein A EcZ Escherichia coli O157:H7 EDL933 Length = 427 Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 10/197 (5%) Query: 4 RPDLIVCEECDAVYQRPTLGQREVARCLRCHAELERDTGRRLEHLLPLTIGALILFVIAN 63 R D C +CD ++ P + + A C RC A++ L L + L+L A Sbjct: 25 RGDYQRCPQCDMLFSLPEINSHQSAYCXRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAW 84 Query: 64 VFPIVTIELQGLSADTTLMGAVVALTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPGS 123 P++ I L G+ D +M + +T+ G + +V + P+I + + YL G+ Sbjct: 85 GEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWF-GN 143 Query: 124 R---RQRPPGFVLLLRLMQAARPWGMIEVFMLGILVALIKLSNIAEVIPGPALWSFGGLT 180 R RP +L +++ + W M++++++GI VA IK+ + A + G L+SF L Sbjct: 144 RLGMNLRP-----VLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALV 198 Query: 181 VLLTVVVS-FNPRYLWH 196 +L TV +S N LW Sbjct: 199 ILTTVTLSHLNVEELWE 215 Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 6/183 (3%) Query: 28 ARCLRCHAELERDTGRRLEHLLPLTIGALILFVIANVFPIVTIELQGLSADTTLMGAVVA 87 RC RCH L L+ + +++L + AN+ PI I L G + T++ +++ Sbjct: 246 GRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMS 305 Query: 88 LTRDGMSEVALLVLATTLLFPMIQLFVLLYLLMPGSRR--QRPPGFVLLLRLMQAARPWG 145 L ++ VA +V ++L P ++ V+ LL+ + Q +LLLR++ W Sbjct: 306 LASSNIA-VAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWS 364 Query: 146 MIEVFMLGILVALIKLSNIAEVIPGPALWSFGGLTVLLTVVVSFNPRYLWHLWEQHQGSG 205 M+++F++ + ++LI I GPA + FG +L + V + L LW+ H+ SG Sbjct: 365 MLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRL--LWDAHE-SG 421 Query: 206 EVR 208 R Sbjct: 422 NAR 424