BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0042.p (234 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA5525 [K] COG1802 Transcriptional regulators Pae Pseudomonas ae... 135 1e-31 mlr7171 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium... 119 5e-27 mlr1038 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium... 118 1e-26 mlr7177 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium... 116 5e-26 mll9027 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium... 112 5e-25 >PA5525 [K] COG1802 Transcriptional regulators Pae Pseudomonas aeruginosa Length = 246 Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 120/217 (55%), Gaps = 21/217 (9%) Query: 19 TLSERVYQDLCELIQAGQVRPGQKLTLKGLADALGISPMPVREAVRQLAAEGALEILPNR 78 L ER+YQ L E + AG+ +PG++L ++ LA+ SPMPVR A+++L AEGALE R Sbjct: 24 NLQERLYQRLREDLLAGRFQPGERLKIRDLANQWDTSPMPVRAALQRLVAEGALEGEAQR 83 Query: 79 AMRVPLMTKGKFRELLKIRLALEGLAIEHAARHIDAMGLEQVA----RLHDTLSVEMKRK 134 ++RVPLMT+ +F ++L++RL+LEGLA E A+ +D LE + R+ D L + Sbjct: 84 SLRVPLMTRERFLQILQVRLSLEGLAAESASGRLDEQALEGLEGCLRRMEDAL------R 137 Query: 135 RPNVDLVIRLNKQLHFAAYQGSGMPTLVDLIAGLWLQVGPVINLDLRAGSRRLAEAPALV 194 R V + N + H Y+ G P L+ LI LWLQVGP N R EA + Sbjct: 138 RREVQAYLDANSEFHLTLYRACGNPVLLRLIETLWLQVGPFFN-------RLFTEADLSL 190 Query: 195 ----HHARLLEGLRAGSPEKARAGLEGDLLSAAEMIL 227 H L+ LR G ARA +E DL + +L Sbjct: 191 RLNDFHEDALDALRRGDGPAARAAIEQDLAYFGQYLL 227 >mlr7171 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium loti Length = 218 Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 125/217 (57%), Gaps = 9/217 (4%) Query: 12 MRKIQHATLSERVYQDLCELIQAGQVRPGQKLTLKGLADALGISPMPVREAVRQLAAEGA 71 M K++H TL++R Y L + + +G PGQ L ++ LA+ GIS P+REA+++L AE Sbjct: 1 MLKLEHQTLNDRAYGALKQELISGGFNPGQTLVIRKLAETFGISTTPIREALQRLVAERL 60 Query: 72 LEILPNRAMRVPLMTKGKFRELLKIRLALEGLAIEHAARHIDAMGLEQVARLHDTLSVEM 131 LE+ NR++ VPL++ F EL IR+A+EGLA E AA I+ GL ++ TL+ M Sbjct: 61 LEMQNNRSIIVPLLSAPAFEELTHIRIAVEGLAGEMAATRINESGLVEI---QATLA-GM 116 Query: 132 KR--KRPNVDLVIRLNKQLHFAAYQGSGMPTLVDLIAGLWLQVGPVINLDLRAGSRRLAE 189 +R + + LN+ HFA YQ +G P L+++I LW +VGP + L ++A R + + Sbjct: 117 QRAIEAGDARAYHALNEAFHFAIYQHAGAPILLNMIRDLWGRVGPYLKLLMQA-DRYIPQ 175 Query: 190 APALVHHARLLEGLRAGSPEKARAGLEGDLLSAAEMI 226 + H R++ L R LE D+ AA ++ Sbjct: 176 SNDA--HRRIVAALEQRDGSAVRVSLEQDIAVAAAVL 210 >mlr1038 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium loti Length = 226 Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 117/209 (55%), Gaps = 6/209 (2%) Query: 19 TLSERVYQDLCELIQAGQVRPGQKLTLKGLADALGISPMPVREAVRQLAAEGALEILPNR 78 TL +RVY+ + ELI G + PG+ +T++ LADA G+SPMPVREA+R+L A AL ++ R Sbjct: 20 TLQDRVYRHVTELILDGSIVPGEMVTVQSLADAFGVSPMPVREALRRLTAANALMVVSGR 79 Query: 79 AMRVPLMTKGKFRELLKIRLALEGLAIEHAARHIDAMGLEQVARLHDTLSVEMKRKRPNV 138 ++ +P +++ + +L +R +E +A AA ID G+ Q+ + ++E +V Sbjct: 80 SIGIPALSRARLIDLRNVRFEIEAIAAAWAAERIDDQGIAQLGQ--HLAALEQANAAGDV 137 Query: 139 DLVIRLNKQLHFAAYQGSGMPTLVDLIAGLWLQVGPVINLDLRAGSRRLAEAPALVHHAR 198 +R N HF+ Y+ +G ++++I LWLQ+ P N+ +G+ A HH Sbjct: 138 KSYLRANYAFHFSIYRAAGSENILNIIENLWLQISPYFNMLHDSGNYSTANE----HHQA 193 Query: 199 LLEGLRAGSPEKARAGLEGDLLSAAEMIL 227 + LR E R + D+ +A ++++ Sbjct: 194 MFAALRNRDAEAVRQAIRADIDAAFDVLV 222 >mlr7177 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium loti Length = 264 Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 110/205 (53%), Gaps = 8/205 (3%) Query: 19 TLSERVYQDLCELIQAGQVRPGQKLTLKGLADALGISPMPVREAVRQLAAEGALEILPNR 78 T+ +RVY +L + G P Q LT++GLADAL S MPVREA+ +L E ALE LPNR Sbjct: 44 TVQDRVYSELRRALIGGLFEPNQVLTIRGLADALVTSTMPVREALGRLITEKALEALPNR 103 Query: 79 AMRVPLMTKGKFRELLKIRLALEGLAIEHAARHIDAMGLEQVARLHDTLSV--EMK--RK 134 ++RVP +T + +LL+ R +EG AI AA M Q+A + L EM+ + Sbjct: 104 SVRVPPITLERIDDLLRARSLIEGEAIALAATR---MNPRQIASIEAMLGEWDEMRALKH 160 Query: 135 RPNVDLVIRLNKQLHFAAYQGSGMPTLVDLIAGLWLQVGPVINLDLRAGSRRLAEAPALV 194 + ++D LN+ HF Y+ G L+ +I LWLQ GP I + + A S E Sbjct: 161 KKDIDREATLNQSFHFEIYRCCGSAVLIPMIESLWLQSGPCIRVAIYAFS-DAGEVDTAH 219 Query: 195 HHARLLEGLRAGSPEKARAGLEGDL 219 +H R++ L + AR L D+ Sbjct: 220 YHRRIVAALAKQDAQAAREALVADI 244 >mll9027 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium loti Length = 229 Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 12/215 (5%) Query: 22 ERVYQDLCELIQAGQVRPGQKLTLKGLADALGISPMPVREAVRQLAAEGALEILPNRAMR 81 E VY++L I + PGQKL L+ LA+A G S MPVREA+ +L ALE P R+M Sbjct: 19 EHVYEELKRSIMMAEFSPGQKLKLEELANAFGTSHMPVREALNRLVMARALESAPRRSMF 78 Query: 82 VPLMTKGKFRELLKIRLALEGLAIEHAARHIDAMGLEQVARLHDTLSVEMKRKRPNVDLV 141 +P + + R LL +R LEG A+ + +A+++ + VE R Sbjct: 79 IPDASVERLRNLLTLRTDLEGKAVGMTVAQRLPNLADILAQINARMDVEAARGALGTRTY 138 Query: 142 IRLNKQLHFAAYQGSGMPTLVDLIAGLWLQVGPVINLDLRAGSRRLAEAPALV----HHA 197 ++LN + HFA Y+ G P LV+LI LW++ GP+++L L P HHA Sbjct: 139 LQLNHRFHFALYERCGNPELVNLIELLWMRYGPLLSL--------LKTTPISFSGHRHHA 190 Query: 198 RLLEGLRAGSPEKARAGLEGDLLSAAEMILAGDGL 232 +++ +R G + A L DL A I + D Sbjct: 191 EIIDAVREGDKDSAIKSLVADLEEAGNAIASADAF 225