BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0020.p         (180 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSp0291 [M] COG0845 Membrane-fusion protein Rso Ralstonia solana...   159   2e-39
XF2398 [M] COG0845 Membrane-fusion protein Xfa Xylella fastidios...   108   4e-24
NMB1738 [M] COG0845 Membrane-fusion protein Nme Neisseria mening...   101   7e-22
NMA1996 [M] COG0845 Membrane-fusion protein NmA Neisseria mening...    99   3e-21
VC1447 [M] COG0845 Membrane-fusion protein Vch Vibrio cholerae         66   5e-11

>RSp0291 [M] COG0845 Membrane-fusion protein Rso Ralstonia solanacearum
          Length = 447

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 105/146 (71%)

Query: 13  LWRRYLSVFSHCWKRRKDLRSGFFNKEEAQFLPAALALQETPDSPSLRWTAWLLMAIVGF 72
           LW+RY  VF H WK+R  L    F   EA+FLPAAL+LQ  P SP+ RW A +LM ++  
Sbjct: 13  LWQRYRDVFRHYWKQRDALSLPRFEVHEAEFLPAALSLQAQPVSPAGRWVARILMLLIVV 72

Query: 73  FFLWSIFGRIDIIVNATGKIIPSTRTKTIGSVDVASVKALHVSEGQTVQAGDLLIELDSS 132
             LWSI G++DIIVNATGKIIPS RTKTI +V+VA+V+ LHV EGQ V+AGD+LIELD+ 
Sbjct: 73  LLLWSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEGQIVKAGDVLIELDAR 132

Query: 133 SSDAEHDKAADAVAQARLQLARVSAL 158
           +SD+E DKA      ARLQ AR  AL
Sbjct: 133 ASDSERDKAVGNEQLARLQAARSRAL 158


>XF2398 [M] COG0845 Membrane-fusion protein Xfa Xylella fastidiosa 9a5c
          Length = 473

 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 4/154 (2%)

Query: 14  WR----RYLSVFSHCWKRRKDLRSGFFNKEEAQFLPAALALQETPDSPSLRWTAWLLMAI 69
           WR    RYL VF   W  R  L       +E  FLPA L L ETP SP+ RW+  +++A 
Sbjct: 8   WRDFLSRYLHVFRAAWSIRAQLEPPHRTADERTFLPAHLELTETPVSPTARWSMRIIIAC 67

Query: 70  VGFFFLWSIFGRIDIIVNATGKIIPSTRTKTIGSVDVASVKALHVSEGQTVQAGDLLIEL 129
                LW+ FG+I+I+  A GKI+  +RTK +  ++ A V+ + + +G+ V+A   LIEL
Sbjct: 68  FIVALLWACFGKIEIVAVAPGKIVVDSRTKVLQPLETAVVRRILIRDGEKVKAHQALIEL 127

Query: 130 DSSSSDAEHDKAADAVAQARLQLARVSALRDAIS 163
           D+++++AE+ +A DA+  A L   R+ AL  A+ 
Sbjct: 128 DATATNAEYTQAEDALLNATLTALRLRALSTALE 161


>NMB1738 [M] COG0845 Membrane-fusion protein Nme Neisseria meningitidis MC58
          Length = 475

 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/144 (39%), Positives = 86/144 (59%), Gaps = 5/144 (3%)

Query: 16  RYLSVFSHCWKRRKDLRSGFFNKEEAQFLPAALALQETPDSPSLRWTAWLLMAIVGFFFL 75
           RY++V+ + W  R  L+      EE  FLPA L L +TP S + +W A  +MA      L
Sbjct: 12  RYITVWRNVWAVRDQLKPPKRTAEEQAFLPAHLELTDTPVSAAPKWAARFIMAFALLALL 71

Query: 76  WSIFGRIDIIVNATGKIIPSTRTKTIGSVDVASVKALHVSEGQTVQAGDLLIELDSSSSD 135
           WS FG+IDI+  A+GK +   R+KTI  ++ A VKA+HV +GQ V+ G+ L EL++  +D
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 136 AEHDKAADAVAQARLQLARVSALR 159
           ++  ++  A     LQ A++S LR
Sbjct: 132 SDVVQSEQA-----LQAAQLSKLR 150


>NMA1996 [M] COG0845 Membrane-fusion protein NmA Neisseria meningitidis
           Z2491
          Length = 454

 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 5/144 (3%)

Query: 16  RYLSVFSHCWKRRKDLRSGFFNKEEAQFLPAALALQETPDSPSLRWTAWLLMAIVGFFFL 75
           RY++V+ + W  R  L       EE  FLPA L L +TP S + +W A  +MA      L
Sbjct: 12  RYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHLELTDTPVSAAPKWAARFIMAFALLALL 71

Query: 76  WSIFGRIDIIVNATGKIIPSTRTKTIGSVDVASVKALHVSEGQTVQAGDLLIELDSSSSD 135
           WS FG+IDI+  A+GK +   R+KTI  ++   VKA+HV +GQ V+ G+ L EL++  +D
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETVVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 136 AEHDKAADAVAQARLQLARVSALR 159
           ++  ++  A     LQ A++S LR
Sbjct: 132 SDVVQSEQA-----LQAAQLSKLR 150


>VC1447 [M] COG0845 Membrane-fusion protein Vch Vibrio cholerae
          Length = 467

 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 56/90 (62%)

Query: 42  QFLPAALALQETPDSPSLRWTAWLLMAIVGFFFLWSIFGRIDIIVNATGKIIPSTRTKTI 101
           +FLPA LAL + P SP  R TA  L   V    LW+ +G++D+   ATG+++ S R++ I
Sbjct: 37  EFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVI 96

Query: 102 GSVDVASVKALHVSEGQTVQAGDLLIELDS 131
            S + + + ++HV +GQ V+ G  L+ LD+
Sbjct: 97  QSYEQSRLLSIHVRDGQRVEKGAPLLTLDT 126