BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0016.p (1261 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1251 [L] COG1643 HrpA-like helicases Rso Ralstonia solanacearum 1714 0.0 STM1641 [L] COG1643 HrpA-like helicases Sty Salmonella typhimuri... 1090 0.0 hrpA [L] COG1643 HrpA-like helicases Eco Escherichia coli K12 1078 0.0 ZhrpA [L] COG1643 HrpA-like helicases EcZ Escherichia coli O157:... 1076 0.0 ECs2015 [L] COG1643 HrpA-like helicases Ecs Escherichia coli O15... 1076 0.0 >RSc1251 [L] COG1643 HrpA-like helicases Rso Ralstonia solanacearum Length = 1331 Score = 1714 bits (4438), Expect = 0.0, Method: Compositional matrix adjust. Identities = 881/1276 (69%), Positives = 1010/1276 (79%), Gaps = 63/1276 (4%) Query: 1 LPKICLELGRGEKG----LIGHTQPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLS 56 LPKICL +GRG LIGHTQPRRIAA+STAKRIAQE+ SP GE VGY+VRFNDTLS Sbjct: 104 LPKICLSIGRGIGAGGTGLIGHTQPRRIAATSTAKRIAQEIGSPLGEHVGYQVRFNDTLS 163 Query: 57 KGAWIKLMTDGILLAETQTDPLLRQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKI 116 GA +KLMTDGILLAETQ DPLLR YDTIIIDEAHERSLNIDFLLGYLKQLLP+RPDLK+ Sbjct: 164 AGASVKLMTDGILLAETQNDPLLRGYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKV 223 Query: 117 IITSATIDADRFARHFGREVKGEIVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQ 176 IITSATIDA RFA HF G PAPVIEVSGRLYPVE+RYRP+ Sbjct: 224 IITSATIDAQRFAEHFA----GPKGPAPVIEVSGRLYPVEVRYRPV-------------- 265 Query: 177 ARARAEGRASQAQKDREQRDLMDAVVDAVDELARIGAGDVLVFLPGEREIRDAAEALRKH 236 + +KD+E RDL D +VDAVDELAR GAGDVL+FLPGEREIR+AAEALRKH Sbjct: 266 ---------QRDEKDKE-RDLYDGIVDAVDELAREGAGDVLIFLPGEREIREAAEALRKH 315 Query: 237 HPPHVEILPLFARLSAQEQERVFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKR 296 HP H EILPLFARLS QEQERVF+ SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKR Sbjct: 316 HPAHTEILPLFARLSVQEQERVFRPSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKR 375 Query: 297 YSYRNKVEQLQIEPVAQSAANQRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSL 356 YSYRNKVEQLQIEPV+Q+AANQRAGRCGRVA GVCIRLY+E DF+ RP+FTDPEILRSSL Sbjct: 376 YSYRNKVEQLQIEPVSQAAANQRAGRCGRVADGVCIRLYEEADFIARPRFTDPEILRSSL 435 Query: 357 ASVILRMKSLHLTDVESFPFIEPPLGRAIADGYQLLQELGAVEEHGGVNRLTPLGKQLAR 416 A+VILRMK+L LTDVE FPFIEPPLGRAIADGYQLLQELGAV++ N LTPLGKQ+AR Sbjct: 436 AAVILRMKALRLTDVEQFPFIEPPLGRAIADGYQLLQELGAVDDE---NALTPLGKQVAR 492 Query: 417 LPLDPRVGRMILAGRDNACLTELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEF 476 LPLDPRV RMILAGRD+ CL E+LIIA+A+SVQDPRDRP + Q AD AH++FADEKSEF Sbjct: 493 LPLDPRVARMILAGRDHQCLREMLIIASALSVQDPRDRPQELQQQADQAHRQFADEKSEF 552 Query: 477 ASYLKIWKWFEDAIAHKKSNRQLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNE 536 ++K+WKWFE+A+AHKKSN+QLQ+ CR +FLS LRLREWRDVHSQL T V EQGW+LNE Sbjct: 553 LGWVKLWKWFEEAVAHKKSNKQLQDQCRAHFLSHLRLREWRDVHSQLHTTVAEQGWKLNE 612 Query: 537 APATYDQLHLALLTGLLGNVGFKSED----DAQYLGARGIKFNIWPGAHLTKKPGRWVMA 592 + TY+QLHLALLTGLLGN+G + E+ +YLGARGIKF +WPG+ + +K G+W++A Sbjct: 613 SEPTYEQLHLALLTGLLGNIGVRIEEADGKGREYLGARGIKFFLWPGSAIARKAGKWMVA 672 Query: 593 AELVDTARLYARCVANIQPEWLEKLGGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVY 652 EL++T+RL+ R +A I+PEW+EK+G HLLK SW +P WEK+A QV A ER TLYGL VY Sbjct: 673 GELIETSRLFGRTLARIEPEWVEKVGAHLLKVSWSDPHWEKKAGQVMAFERGTLYGLPVY 732 Query: 653 SQRRINYGKINPAEAREIFIRDALVGGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLV 712 QRR+++G + P EARE+FIR ALV G+FETR PFFAHNQ+LVREIENLEHKSRR DVLV Sbjct: 733 QQRRVHFGPMQPREARELFIRRALVDGEFETRLPFFAHNQRLVREIENLEHKSRRQDVLV 792 Query: 713 DDELIIGFYDKLIPHDICNGVDFEKWHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPK 772 DDELI FYD IP DI N V FE W+ EA A KLLYLNRDDLMRHEAAG+TT+LFPK Sbjct: 793 DDELIHAFYDSQIPADIHNTVAFEGWYAEAAKASQKLLYLNRDDLMRHEAAGITTDLFPK 852 Query: 773 TMNVAGIAMALSYHFEPGAARDGVTLTVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSL 832 T+ +AGI M L+YHFEPG+ RDGVTLTVPLYALNQV A R EWLVPGMLKEK HLLLKSL Sbjct: 853 TLPIAGIDMGLTYHFEPGSPRDGVTLTVPLYALNQVPAQRAEWLVPGMLKEKAHLLLKSL 912 Query: 833 PQKLRRHCVPLPDYAARFCERMEERKTFGRGNLIDAIIADIREQITLLVKPSDFKQETLS 892 PQKLRRHCVPLPDYAA F R+ G G+L+D +IAD+REQ +K +DFK ETL Sbjct: 913 PQKLRRHCVPLPDYAAGFVSRVR----LGDGDLLDRLIADVREQTGTPLKRADFKLETLP 968 Query: 893 AHHAMNFKIVDEHGRQLEMGRNLAALQAEFGGQARQQFQKLAEQVAIAPREDEDNAAPSP 952 AHH MNFK++DEHGRQL+MGRNLA L+AE GG+A+Q FQ +A + A D A P Sbjct: 969 AHHFMNFKVIDEHGRQLDMGRNLAQLRAELGGRAQQTFQSIAAKDAAVAGAPGDGAGARP 1028 Query: 953 AAATGKGGTSAAPAAAAPASVGEYSNLTSWSFGELPELLEITRGSGKQAQTLIGFPALVD 1012 GKGG APA A YS LT+W+FGELPELLE+ +GS QTL G+PALVD Sbjct: 1029 ----GKGGKPDAPANPA-----LYSGLTTWNFGELPELLEVRKGS----QTLFGYPALVD 1075 Query: 1013 RKTHCDLEVFDDPAEAARFHYAGLRRLFALQMKEQLKYLEKNIPGLQQMGMQFMALGSQE 1072 HCD+EVFDDPAEAAR H GLRRLFALQ++E LKYLEKNIPGL QM +QFM LG+Q+ Sbjct: 1076 GGDHCDVEVFDDPAEAARIHRLGLRRLFALQLREPLKYLEKNIPGLSQMAIQFMTLGAQD 1135 Query: 1073 ELREQILNAGLERAFLQDPLPRNADEFNRRRDEGKARLGLLVNEIARLCGQILAEYHALP 1132 ELR QIL+A L+RA LQDPLP + F R+DEG+ RL LL EIARL G ILAEY LP Sbjct: 1136 ELRNQILDAALDRACLQDPLPADDAGFGARKDEGRTRLTLLAQEIARLAGAILAEYAQLP 1195 Query: 1133 KKLQGIKAHAQAAADMQAQLSQLVGKRFVAETDYGNLSHYPRYLKAINVRLDKLRADPAR 1192 +KLQ K A AD+ AQL L+ KRF+ T Y L+H+PRYLK I +R+DKL+ADP R Sbjct: 1196 RKLQIAKPFGAAYADIDAQLKALMHKRFIEATPYAQLAHFPRYLKGIAMRIDKLKADPTR 1255 Query: 1193 DTRLLAEWNSVALPYQRALKD-------RAGRADPKMTEFRWMLEELRVSLYAQELKTPM 1245 DT+ + E + YQRA K RA DP+M EFRWMLEELR++L+AQEL+TP+ Sbjct: 1256 DTQRMQEMAPLFQQYQRAEKQLRVQGQGRAAAGDPRMEEFRWMLEELRIALFAQELRTPV 1315 Query: 1246 PVSVKRLQKVWESMQR 1261 P+SVKRLQKVWESMQR Sbjct: 1316 PMSVKRLQKVWESMQR 1331 >STM1641 [L] COG1643 HrpA-like helicases Sty Salmonella typhimurium LT2 Length = 1300 Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 572/1259 (45%), Positives = 805/1259 (63%), Gaps = 84/1259 (6%) Query: 1 LPKICLELGRGEKGLIGHTQPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAW 60 LPKIC+ELGRG KGLIGHTQPRR+AA + A RIA+EL + PG +GYKVRF+D +S Sbjct: 110 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSSNTM 169 Query: 61 IKLMTDGILLAETQTDPLLRQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITS 120 +KLMTDGILLAE Q D LL QYDT+IIDEAHERSLNIDFLLGYLK+LLP+RPDLK+IITS Sbjct: 170 VKLMTDGILLAEIQQDRLLMQYDTLIIDEAHERSLNIDFLLGYLKELLPRRPDLKVIITS 229 Query: 121 ATIDADRFARHFGREVKGEIVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARAR 180 ATID +RF+RHF AP+IEVSGR YPVE+RYRPI V +A Sbjct: 230 ATIDPERFSRHFNN--------APIIEVSGRTYPVEVRYRPI-----------VEEA--- 267 Query: 181 AEGRASQAQKDREQRDLMDAVVDAVDELARIGAGDVLVFLPGEREIRDAAEALRKHHPPH 240 D +RD + A+ DAVDEL R GD+L+F+ GEREIRD A+AL K + H Sbjct: 268 ----------DDTERDQLQAIFDAVDELGRESPGDILIFMSGEREIRDTADALNKLNLRH 317 Query: 241 VEILPLFARLSAQEQERVFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYR 300 E+LPL+ARLS EQ RVF++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR Sbjct: 318 TEVLPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 377 Query: 301 NKVEQLQIEPVAQSAANQRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVI 360 KV++L IEP++Q++ANQR GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVI Sbjct: 378 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 437 Query: 361 LRMKSLHLTDVESFPFIEPPLGRAIADGYQLLQELGAV--EEHGGVNRLTPLGKQLARLP 418 L+M +L L D+ +FPF+E P R I DG +LL+ELGA+ +E +LTPLG+QL++LP Sbjct: 438 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLP 497 Query: 419 LDPRVGRMILAGRDNACLTELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFAS 478 +DPR+ RM+L + + C+ E +II +A+S+QDPR+RP+D Q A+D H++F D++S+F + Sbjct: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHDKESDFLA 557 Query: 479 YLKIWKWFEDAIAHKKSNRQLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAP 538 ++ +W + + SN Q + CR ++L+ LR+REW+D+++QL +VKE G +N P Sbjct: 558 FVNLWNYLGEQQKALSSN-QFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 616 Query: 539 ATYDQLHLALLTGLLGNVGFKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDT 598 A Y ++H+ALLTGLL ++G K D +Y GAR +F+I+PG+ L KKP +W M AELV+T Sbjct: 617 AEYREIHVALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWTMVAELVET 676 Query: 599 ARLYARCVANIQPEWLEKLGGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRIN 658 +RL+ R A I+PEW+E + HL+K+S+ EP WE+ V A+E+ T+YGL + + R++N Sbjct: 677 SRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 736 Query: 659 YGKINPAEAREIFIRDALVGGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELII 718 Y +I+PA RE+FIR ALV GD++TR FF N KL E+E LEHKSRR D+LVDD+ + Sbjct: 737 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLF 796 Query: 719 GFYDKLIPHDICNGVDFEKWHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAG 778 FYD+ I HD+ + F+ W K+ + P LL + L++ A ++ +P + Sbjct: 797 EFYDQRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 856 Query: 779 IAMALSYHFEPGAARDGVTLTVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSLPQKLRR 838 + + LSY FEPGA DGVT+ +PL LNQV EW +PG+ +E V L+KSLP+ +RR Sbjct: 857 LKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRRELVIALIKSLPKPVRR 916 Query: 839 HCVPLPDYAARFCERMEERKTFGRGNLIDAIIADIREQITLLVKPSDFKQETLSAHHAMN 898 + VP P+YA F R+ T L+DA+ ++R + V D+ + + H + Sbjct: 917 NFVPAPNYAEAFLGRV----TPLELPLLDALERELRRMTGVTVDREDWHWDQVPEHLKIT 972 Query: 899 FKIVDEHGRQLEMGRNLAALQAEFGGQARQQFQKLAEQVAIAPREDEDNAAPSPAAATGK 958 F++V++ ++L+ GR+LA L+ G+ ++ +A+ Sbjct: 973 FRVVNDKNKKLQEGRSLAELKNALKGKVQETLSAVADDGI-------------------- 1012 Query: 959 GGTSAAPAAAAPASVGEYSNLTSWSFGELPELLEITRGSGKQAQTLIGFPALVDRKTHCD 1018 E S L WSFGELPE E RG+ K + +PALVD + Sbjct: 1013 ----------------EQSGLHIWSFGELPESYEQKRGNYK----VKAWPALVDERDSVA 1052 Query: 1019 LEVFDDPAEAARFHYAGLRRLFALQMKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQI 1078 +++FD+P E + + GLRRL L + +KYL + +P ++G+ F G EL + Sbjct: 1053 IKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC 1112 Query: 1079 LNAGLERAFLQDPLPRNADE-FNRRRDEGKARLGLLVNEIARLCGQILAEYHALPKKLQG 1137 + G+++ + P ++ F ++ +A L V +IA+ +IL + K+L+G Sbjct: 1113 IACGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVVDIAKQVERILTTVFNINKRLKG 1172 Query: 1138 --IKAHAQAAADMQAQLSQLVGKRFVAETDYGNLSHYPRYLKAINVRLDKLRADPARDTR 1195 + A +D++AQ+S LV + FV + L RYL+AI RL+KL DP RD Sbjct: 1173 RVDMSMALGLSDIKAQMSGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1232 Query: 1196 LLAEWNSVALPYQRALKDR--AGRADPKMTEFRWMLEELRVSLYAQELKTPMPVSVKRL 1252 + + SV +Q+ + A R D + E RWM+EELRVS +AQ+L TP P+S KR+ Sbjct: 1233 QMLKVESVQQAWQQWINKLPPARREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRI 1291 >hrpA [L] COG1643 HrpA-like helicases Eco Escherichia coli K12 Length = 1281 Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 573/1266 (45%), Positives = 807/1266 (63%), Gaps = 84/1266 (6%) Query: 1 LPKICLELGRGEKGLIGHTQPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAW 60 LPKIC+ELGRG KGLIGHTQPRR+AA + A RIA+EL + PG +GYKVRF+D +S Sbjct: 91 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM 150 Query: 61 IKLMTDGILLAETQTDPLLRQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITS 120 +KLMTDGILLAE Q D LL QYDTIIIDEAHERSLNIDFLLGYLK+LLP+RPDLKIIITS Sbjct: 151 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 210 Query: 121 ATIDADRFARHFGREVKGEIVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARAR 180 ATID +RF+RHF AP+IEVSGR YPVE+RYRPI V +A Sbjct: 211 ATIDPERFSRHFNN--------APIIEVSGRTYPVEVRYRPI-----------VEEA--- 248 Query: 181 AEGRASQAQKDREQRDLMDAVVDAVDELARIGAGDVLVFLPGEREIRDAAEALRKHHPPH 240 D +RD + A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H Sbjct: 249 ----------DDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRH 298 Query: 241 VEILPLFARLSAQEQERVFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYR 300 EILPL+ARLS EQ RVF++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR Sbjct: 299 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 358 Query: 301 NKVEQLQIEPVAQSAANQRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVI 360 KV++L IEP++Q++ANQR GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVI Sbjct: 359 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 418 Query: 361 LRMKSLHLTDVESFPFIEPPLGRAIADGYQLLQELGAV--EEHGGVNRLTPLGKQLARLP 418 L+M +L L D+ +FPF+E P R I DG +LL+ELGA+ +E +LTPLG+QL++LP Sbjct: 419 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 478 Query: 419 LDPRVGRMILAGRDNACLTELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFAS 478 +DPR+ RM+L + + C+ E +II +A+S+QDPR+RPMD Q A+D H++F D++S+F + Sbjct: 479 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 538 Query: 479 YLKIWKWFEDAIAHKKSNRQLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAP 538 ++ +W + + SN + CR ++L+ LR+REW+D+++QL +VKE G +N P Sbjct: 539 FVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 597 Query: 539 ATYDQLHLALLTGLLGNVGFKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDT 598 A Y ++H+ALLTGLL ++G K D +Y GAR +F+I+PG+ L KKP +WVM AELV+T Sbjct: 598 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 657 Query: 599 ARLYARCVANIQPEWLEKLGGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRIN 658 +RL+ R A I PEW+E + HL+K+++ EP WE+ V A+E+ T+YGL + + R++N Sbjct: 658 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 717 Query: 659 YGKINPAEAREIFIRDALVGGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELII 718 Y +I+PA RE+FIR ALV GD++TR FF N KL E+E LEHKSRR D+LVDDE + Sbjct: 718 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLF 777 Query: 719 GFYDKLIPHDICNGVDFEKWHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAG 778 FYD+ I HD+ + F+ W K+ + P LL + L++ A ++ +P + Sbjct: 778 EFYDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 837 Query: 779 IAMALSYHFEPGAARDGVTLTVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSLPQKLRR 838 + + LSY FEPGA DGVT+ +PL LNQV EW +PG+ +E V L+KSLP+ +RR Sbjct: 838 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 897 Query: 839 HCVPLPDYAARFCERMEERKTFGRGNLIDAIIADIREQITLLVKPSDFKQETLSAHHAMN 898 + VP P+YA F R++ + L+D++ ++R + V D+ + + H + Sbjct: 898 NFVPAPNYAEAFLGRVKPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT 953 Query: 899 FKIVDEHGRQLEMGRNLAALQAEFGGQARQQFQKLAEQVAIAPREDEDNAAPSPAAATGK 958 F++VD+ ++L+ GR+L L+ G+ ++ +A+ Sbjct: 954 FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI-------------------- 993 Query: 959 GGTSAAPAAAAPASVGEYSNLTSWSFGELPELLEITRGSGKQAQTLIGFPALVDRKTHCD 1018 E S L WSFG+LPE E RG+ K + +PALVD + Sbjct: 994 ----------------EQSGLHIWSFGQLPESYEQKRGNYK----VKAWPALVDERDSVA 1033 Query: 1019 LEVFDDPAEAARFHYAGLRRLFALQMKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQI 1078 +++FD+P E + + GLRRL L + +KYL + +P ++G+ F G EL + Sbjct: 1034 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC 1093 Query: 1079 LNAGLERAFLQDPLPRNADE-FNRRRDEGKARLGLLVNEIARLCGQILAEYHALPKKLQG 1137 ++ G+++ + P +E F ++ +A L V +IA+ QIL + K+L+G Sbjct: 1094 ISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKG 1153 Query: 1138 --IKAHAQAAADMQAQLSQLVGKRFVAETDYGNLSHYPRYLKAINVRLDKLRADPARDTR 1195 A +D++AQ+ LV + FV + L RYL+AI RL+KL DP RD Sbjct: 1154 RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1213 Query: 1196 LLAEWNSVALPYQRALKDR--AGRADPKMTEFRWMLEELRVSLYAQELKTPMPVSVKRLQ 1253 + + +V +Q+ + A R D + E RWM+EELRVS +AQ+L TP P+S KR+ Sbjct: 1214 QMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1273 Query: 1254 KVWESM 1259 + E + Sbjct: 1274 QAMEQI 1279 >ZhrpA [L] COG1643 HrpA-like helicases EcZ Escherichia coli O157:H7 EDL933 Length = 1281 Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 573/1266 (45%), Positives = 805/1266 (63%), Gaps = 84/1266 (6%) Query: 1 LPKICLELGRGEKGLIGHTQPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAW 60 LPKIC+ELGRG KGLIGHTQPRR+AA + A RIA+EL + PG +GYKVRF+D +S Sbjct: 91 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM 150 Query: 61 IKLMTDGILLAETQTDPLLRQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITS 120 +KLMTDGILLAE Q D LL QYDTIIIDEAHERSLNIDFLLGYLK+LLP+RPDLKIIITS Sbjct: 151 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 210 Query: 121 ATIDADRFARHFGREVKGEIVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARAR 180 ATID +RF+RHF AP+IEVSGR YPVE+RYRPI V +A Sbjct: 211 ATIDPERFSRHFNN--------APIIEVSGRTYPVEVRYRPI-----------VEEA--- 248 Query: 181 AEGRASQAQKDREQRDLMDAVVDAVDELARIGAGDVLVFLPGEREIRDAAEALRKHHPPH 240 D +RD + A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H Sbjct: 249 ----------DDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRH 298 Query: 241 VEILPLFARLSAQEQERVFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYR 300 EILPL+ARLS EQ RVF++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR Sbjct: 299 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 358 Query: 301 NKVEQLQIEPVAQSAANQRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVI 360 KV++L IEP++Q++ANQR GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVI Sbjct: 359 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 418 Query: 361 LRMKSLHLTDVESFPFIEPPLGRAIADGYQLLQELGAV--EEHGGVNRLTPLGKQLARLP 418 L+M +L L D+ +FPF+E P R I DG +LL+ELGA+ +E +LTPLG+QL++LP Sbjct: 419 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 478 Query: 419 LDPRVGRMILAGRDNACLTELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFAS 478 +DPR+ RM+L + + C+ E +II +A+S+QDPR+RPMD Q A+D H++F D++S+F + Sbjct: 479 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 538 Query: 479 YLKIWKWFEDAIAHKKSNRQLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAP 538 ++ +W + + SN + CR ++L+ LR+REW+D+++QL +VKE G +N P Sbjct: 539 FVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 597 Query: 539 ATYDQLHLALLTGLLGNVGFKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDT 598 A Y ++H+ALLTGLL ++G K D +Y GAR +F+I+PG+ L KKP +WVM AELV+T Sbjct: 598 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 657 Query: 599 ARLYARCVANIQPEWLEKLGGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRIN 658 +RL+ R A I PEW+E + HL+K+++ EP WE+ V A+E+ T+YGL + + R++N Sbjct: 658 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 717 Query: 659 YGKINPAEAREIFIRDALVGGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELII 718 Y +I+PA RE+FIR ALV GD++TR FF N KL E+E LEHKSRR D+LVDDE + Sbjct: 718 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLF 777 Query: 719 GFYDKLIPHDICNGVDFEKWHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAG 778 FYD+ I HD+ + F+ W K+ + P LL + L++ A ++ +P + Sbjct: 778 EFYDQRIGHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 837 Query: 779 IAMALSYHFEPGAARDGVTLTVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSLPQKLRR 838 + + LSY FEPGA DGVT+ +PL LNQV EW +PG+ +E V L+KSLP+ +RR Sbjct: 838 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 897 Query: 839 HCVPLPDYAARFCERMEERKTFGRGNLIDAIIADIREQITLLVKPSDFKQETLSAHHAMN 898 + VP P+YA F R+ + L+D++ ++R + V D+ + + H + Sbjct: 898 NFVPAPNYAEAFLGRVTPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT 953 Query: 899 FKIVDEHGRQLEMGRNLAALQAEFGGQARQQFQKLAEQVAIAPREDEDNAAPSPAAATGK 958 F++VD+ ++L+ GR+L L+ G+ ++ +A+ Sbjct: 954 FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI-------------------- 993 Query: 959 GGTSAAPAAAAPASVGEYSNLTSWSFGELPELLEITRGSGKQAQTLIGFPALVDRKTHCD 1018 E S L WSFG+LPE E RG+ K + +PALVD + Sbjct: 994 ----------------EQSGLHIWSFGQLPESYEQKRGNYK----VKAWPALVDERDSVA 1033 Query: 1019 LEVFDDPAEAARFHYAGLRRLFALQMKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQI 1078 +++FD+P E + + GLRRL L + +KYL + +P ++G+ F G EL + Sbjct: 1034 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC 1093 Query: 1079 LNAGLERAFLQDPLPRNADE-FNRRRDEGKARLGLLVNEIARLCGQILAEYHALPKKLQG 1137 ++ G+++ + P +E F ++ +A L V +IA+ QIL + K+L+G Sbjct: 1094 ISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKG 1153 Query: 1138 --IKAHAQAAADMQAQLSQLVGKRFVAETDYGNLSHYPRYLKAINVRLDKLRADPARDTR 1195 A +D++AQ+ LV + FV + L RYL+AI RL+KL DP RD Sbjct: 1154 RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1213 Query: 1196 LLAEWNSVALPYQRALKDR--AGRADPKMTEFRWMLEELRVSLYAQELKTPMPVSVKRLQ 1253 + + +V +Q+ A R D + E RWM+EELRVS +AQ+L TP P+S KR+ Sbjct: 1214 QMLKVENVQQAWQQWFNKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1273 Query: 1254 KVWESM 1259 + E + Sbjct: 1274 QAMEQI 1279 >ECs2015 [L] COG1643 HrpA-like helicases Ecs Escherichia coli O157:H7 Length = 1281 Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 573/1266 (45%), Positives = 805/1266 (63%), Gaps = 84/1266 (6%) Query: 1 LPKICLELGRGEKGLIGHTQPRRIAASSTAKRIAQELNSPPGELVGYKVRFNDTLSKGAW 60 LPKIC+ELGRG KGLIGHTQPRR+AA + A RIA+EL + PG +GYKVRF+D +S Sbjct: 91 LPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTM 150 Query: 61 IKLMTDGILLAETQTDPLLRQYDTIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKIIITS 120 +KLMTDGILLAE Q D LL QYDTIIIDEAHERSLNIDFLLGYLK+LLP+RPDLKIIITS Sbjct: 151 VKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITS 210 Query: 121 ATIDADRFARHFGREVKGEIVPAPVIEVSGRLYPVEIRYRPIDNADRSGVSTEVAQARAR 180 ATID +RF+RHF AP+IEVSGR YPVE+RYRPI V +A Sbjct: 211 ATIDPERFSRHFNN--------APIIEVSGRTYPVEVRYRPI-----------VEEA--- 248 Query: 181 AEGRASQAQKDREQRDLMDAVVDAVDELARIGAGDVLVFLPGEREIRDAAEALRKHHPPH 240 D +RD + A+ DAVDEL++ GD+L+F+ GEREIRD A+AL K + H Sbjct: 249 ----------DDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRH 298 Query: 241 VEILPLFARLSAQEQERVFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYR 300 EILPL+ARLS EQ RVF++ + RRIVLATNVAETSLTVPGI+YV+D G AR+ RYSYR Sbjct: 299 TEILPLYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYR 358 Query: 301 NKVEQLQIEPVAQSAANQRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVI 360 KV++L IEP++Q++ANQR GRCGRV+ G+CIRLY E DFL RP+FTDPEILR++LASVI Sbjct: 359 TKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVI 418 Query: 361 LRMKSLHLTDVESFPFIEPPLGRAIADGYQLLQELGAV--EEHGGVNRLTPLGKQLARLP 418 L+M +L L D+ +FPF+E P R I DG +LL+ELGA+ +E +LTPLG+QL++LP Sbjct: 419 LQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 478 Query: 419 LDPRVGRMILAGRDNACLTELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFAS 478 +DPR+ RM+L + + C+ E +II +A+S+QDPR+RPMD Q A+D H++F D++S+F + Sbjct: 479 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLA 538 Query: 479 YLKIWKWFEDAIAHKKSNRQLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAP 538 ++ +W + + SN + CR ++L+ LR+REW+D+++QL +VKE G +N P Sbjct: 539 FVNLWNYLGEQQKALSSN-AFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEP 597 Query: 539 ATYDQLHLALLTGLLGNVGFKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDT 598 A Y ++H+ALLTGLL ++G K D +Y GAR +F+I+PG+ L KKP +WVM AELV+T Sbjct: 598 AEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVET 657 Query: 599 ARLYARCVANIQPEWLEKLGGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRIN 658 +RL+ R A I PEW+E + HL+K+++ EP WE+ V A+E+ T+YGL + + R++N Sbjct: 658 SRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVN 717 Query: 659 YGKINPAEAREIFIRDALVGGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELII 718 Y +I+PA RE+FIR ALV GD++TR FF N KL E+E LEHKSRR D+LVDDE + Sbjct: 718 YSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLF 777 Query: 719 GFYDKLIPHDICNGVDFEKWHKEATAADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAG 778 FYD+ I HD+ + F+ W K+ + P LL + L++ A ++ +P + Sbjct: 778 EFYDQRIGHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN 837 Query: 779 IAMALSYHFEPGAARDGVTLTVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSLPQKLRR 838 + + LSY FEPGA DGVT+ +PL LNQV EW +PG+ +E V L+KSLP+ +RR Sbjct: 838 LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRR 897 Query: 839 HCVPLPDYAARFCERMEERKTFGRGNLIDAIIADIREQITLLVKPSDFKQETLSAHHAMN 898 + VP P+YA F R+ + L+D++ ++R + V D+ + + H + Sbjct: 898 NFVPAPNYAEAFLGRVTPLEL----PLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT 953 Query: 899 FKIVDEHGRQLEMGRNLAALQAEFGGQARQQFQKLAEQVAIAPREDEDNAAPSPAAATGK 958 F++VD+ ++L+ GR+L L+ G+ ++ +A+ Sbjct: 954 FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGI-------------------- 993 Query: 959 GGTSAAPAAAAPASVGEYSNLTSWSFGELPELLEITRGSGKQAQTLIGFPALVDRKTHCD 1018 E S L WSFG+LPE E RG+ K + +PALVD + Sbjct: 994 ----------------EQSGLHIWSFGQLPESYEQKRGNYK----VKAWPALVDERDSVA 1033 Query: 1019 LEVFDDPAEAARFHYAGLRRLFALQMKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQI 1078 +++FD+P E + + GLRRL L + +KYL + +P ++G+ F G EL + Sbjct: 1034 IKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDC 1093 Query: 1079 LNAGLERAFLQDPLPRNADE-FNRRRDEGKARLGLLVNEIARLCGQILAEYHALPKKLQG 1137 ++ G+++ + P +E F ++ +A L V +IA+ QIL + K+L+G Sbjct: 1094 ISCGVDQLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTAVFNINKRLKG 1153 Query: 1138 --IKAHAQAAADMQAQLSQLVGKRFVAETDYGNLSHYPRYLKAINVRLDKLRADPARDTR 1195 A +D++AQ+ LV + FV + L RYL+AI RL+KL DP RD Sbjct: 1154 RVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRA 1213 Query: 1196 LLAEWNSVALPYQRALKDR--AGRADPKMTEFRWMLEELRVSLYAQELKTPMPVSVKRLQ 1253 + + +V +Q+ A R D + E RWM+EELRVS +AQ+L TP P+S KR+ Sbjct: 1214 QMLKVENVQQAWQQWFNKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRIL 1273 Query: 1254 KVWESM 1259 + E + Sbjct: 1274 QAMEQI 1279