BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0036.0012.p         (90 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1235 Non COG                                                       157   8e-39
NMB2021 [CO] COG2924 Fe-S cluster protector protein Nme Neisseri...   150   6e-37
NMA0419 [CO] COG2924 Fe-S cluster protector protein NmA Neisseri...   150   6e-37
HI0760 [CO] COG2924 Fe-S cluster protector protein Hin Haemophil...   104   5e-23
PA5148 [CO] COG2924 Fe-S cluster protector protein Pae Pseudomon...   101   5e-22

>RSc1235 Non COG
          Length = 91

 Score =  157 bits (396), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 70/88 (79%), Positives = 80/88 (90%)

Query: 1  MARMVHCIKLNKEAEGLDFPPYPGELGKRIFENVSKEAWAAWLKHQTMLVNENRLMLADA 60
          MARMVHC+KLNKEAEGLDFPP PGELGK+I+++VSKEAWA WLKHQTML+NENRL +AD 
Sbjct: 1  MARMVHCVKLNKEAEGLDFPPLPGELGKKIWQSVSKEAWAGWLKHQTMLINENRLNMADT 60

Query: 61 RARKYLAAQMEKHFFGEGADAAAGYVPP 88
          RAR+YL  Q EK+FFGEGAD A+GYVPP
Sbjct: 61 RARQYLLKQTEKYFFGEGADQASGYVPP 88


>NMB2021 [CO] COG2924 Fe-S cluster protector protein Nme Neisseria
          meningitidis MC58
          Length = 88

 Score =  150 bits (379), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 77/87 (88%)

Query: 1  MARMVHCIKLNKEAEGLDFPPYPGELGKRIFENVSKEAWAAWLKHQTMLVNENRLMLADA 60
          MARMV C+KLNKEAEG+ FPP P ELGKRIFENVS+EAWAAW +HQTML+NENRL LAD 
Sbjct: 1  MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTRHQTMLINENRLSLADP 60

Query: 61 RARKYLAAQMEKHFFGEGADAAAGYVP 87
          RAR+YLA QME++FFG+GADA  GYVP
Sbjct: 61 RAREYLAQQMEQYFFGDGADAVQGYVP 87


>NMA0419 [CO] COG2924 Fe-S cluster protector protein NmA Neisseria
          meningitidis Z2491
          Length = 88

 Score =  150 bits (379), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 68/87 (78%), Positives = 77/87 (88%)

Query: 1  MARMVHCIKLNKEAEGLDFPPYPGELGKRIFENVSKEAWAAWLKHQTMLVNENRLMLADA 60
          MARMV C+KLNKEAEG+ FPP P ELGKRIFENVS+EAWAAW +HQTML+NENRL LAD 
Sbjct: 1  MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTRHQTMLINENRLSLADP 60

Query: 61 RARKYLAAQMEKHFFGEGADAAAGYVP 87
          RAR+YLA QME++FFG+GADA  GYVP
Sbjct: 61 RAREYLAQQMEQYFFGDGADAVQGYVP 87


>HI0760 [CO] COG2924 Fe-S cluster protector protein Hin Haemophilus
          influenzae
          Length = 90

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 54/90 (60%), Positives = 62/90 (68%), Gaps = 2/90 (2%)

Query: 1  MARMVHCIKLNKEAEGLDFPPYPGELGKRIFENVSKEAWAAWLKHQTMLVNENRLMLADA 60
          MAR V C  L KEAEGLDF  YPGELGKRIF++VSK+AW  W+K QTMLVNE +L + +A
Sbjct: 1  MARTVFCEYLKKEAEGLDFQLYPGELGKRIFDSVSKQAWGEWIKKQTMLVNEKKLNMMNA 60

Query: 61 RARKYLAAQMEKHFFGEGADA-AAGYVPPS 89
            RK L  +M    F EG D    GYVPPS
Sbjct: 61 EHRKLLEQEMVNFLF-EGKDVHIEGYVPPS 89


>PA5148 [CO] COG2924 Fe-S cluster protector protein Pae Pseudomonas
          aeruginosa
          Length = 90

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 60/89 (67%)

Query: 1  MARMVHCIKLNKEAEGLDFPPYPGELGKRIFENVSKEAWAAWLKHQTMLVNENRLMLADA 60
          M+R V C K ++E  GLD PPYPG  G+ I+ NVS++AW  W KHQTML+NE RL + +A
Sbjct: 1  MSRTVMCRKYHEELPGLDRPPYPGAKGEDIYNNVSRKAWDEWQKHQTMLINERRLNMMNA 60

Query: 61 RARKYLAAQMEKHFFGEGADAAAGYVPPS 89
            RK+L  +M+K   GE    A GYVPPS
Sbjct: 61 EDRKFLQQEMDKFLSGEDYAKADGYVPPS 89