BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0036.0010.p (232 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1232 [G] COG0120 Ribose 5-phosphate isomerase Rso Ralstonia s... 272 4e-73 rpiA [G] COG0120 Ribose 5-phosphate isomerase Eco Escherichia co... 264 1e-70 ZrpiA [G] COG0120 Ribose 5-phosphate isomerase EcZ Escherichia c... 264 1e-70 ECs3785 [G] COG0120 Ribose 5-phosphate isomerase Ecs Escherichia... 264 1e-70 STM3063 [G] COG0120 Ribose 5-phosphate isomerase Sty Salmonella ... 263 2e-70 >RSc1232 [G] COG0120 Ribose 5-phosphate isomerase Rso Ralstonia solanacearum Length = 228 Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 146/237 (61%), Positives = 179/237 (75%), Gaps = 14/237 (5%) Query: 1 MTQDELKQAVAKAAIEYVV----DGEIIGVGTGSTANFFIDELGKIKHRIKGAVSACART 56 MTQDELK VA+AA +YV+ +G ++GVGTGSTAN FID + K R GAVS Sbjct: 1 MTQDELKALVAQAAADYVLANVPEGAVLGVGTGSTANLFIDAMAPHKARFAGAVS----- 55 Query: 57 ASPSSIXATAERLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVA 116 S A+ RL+ HG V DLNEV+T+PVY+DGADEI+ GAMIKGGG ALTREKIVA Sbjct: 56 ----SSEASTRRLQGHGFAVLDLNEVDTIPVYVDGADEIDDTGAMIKGGGGALTREKIVA 111 Query: 117 SVAQKFVCIADGSKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRV-KDGKPVVT 175 SVA +FVCIADGSKLV+VLG FPLPVEV+PM+ A VAR+LAALGG+PRLR+ K+G+ T Sbjct: 112 SVAGRFVCIADGSKLVDVLGAFPLPVEVVPMARAAVARQLAALGGQPRLRMTKEGQIYQT 171 Query: 176 DNGCYIIDVLGLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKLEF 232 DNG I+DV GL I +P +E +IN+I GVVT GLFA++GA+V LLGT GV++ +F Sbjct: 172 DNGNVILDVSGLRIGEPKTLEAQINDIPGVVTVGLFAKRGADVLLLGTEAGVQRRDF 228 >rpiA [G] COG0120 Ribose 5-phosphate isomerase Eco Escherichia coli K12 Length = 219 Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 141/230 (61%), Positives = 173/230 (75%), Gaps = 13/230 (5%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVSACARTASPS 60 MTQDELK+AV AA++YV G I+GVGTGSTA FID LG +K +I+GAVS Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVS--------- 51 Query: 61 SIXATAERLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQ 120 S A+ E+L+S GI VFDLNEV+++ +Y+DGADEING MIKGGGAALTREKI+ASVA+ Sbjct: 52 SSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAE 111 Query: 121 KFVCIADGSKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCY 180 KF+CIAD SK V++LGKFPLPVEVIPM+ + VAR+L LGG P R + VVTDNG Sbjct: 112 KFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYR----QGVVTDNGNV 167 Query: 181 IIDVLGLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKL 230 I+DV G+ I DP +E+ IN I GVVT GLFA +GA+V L+GT DGVK + Sbjct: 168 ILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTI 217 >ZrpiA [G] COG0120 Ribose 5-phosphate isomerase EcZ Escherichia coli O157:H7 EDL933 Length = 219 Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 141/230 (61%), Positives = 173/230 (75%), Gaps = 13/230 (5%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVSACARTASPS 60 MTQDELK+AV AA++YV G I+GVGTGSTA FID LG +K +I+GAVS Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVS--------- 51 Query: 61 SIXATAERLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQ 120 S A+ E+L+S GI VFDLNEV+++ +Y+DGADEING MIKGGGAALTREKI+ASVA+ Sbjct: 52 SSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAE 111 Query: 121 KFVCIADGSKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCY 180 KF+CIAD SK V++LGKFPLPVEVIPM+ + VAR+L LGG P R + VVTDNG Sbjct: 112 KFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYR----QGVVTDNGNV 167 Query: 181 IIDVLGLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKL 230 I+DV G+ I DP +E+ IN I GVVT GLFA +GA+V L+GT DGVK + Sbjct: 168 ILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTI 217 >ECs3785 [G] COG0120 Ribose 5-phosphate isomerase Ecs Escherichia coli O157:H7 Length = 219 Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 141/230 (61%), Positives = 173/230 (75%), Gaps = 13/230 (5%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVSACARTASPS 60 MTQDELK+AV AA++YV G I+GVGTGSTA FID LG +K +I+GAVS Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVS--------- 51 Query: 61 SIXATAERLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQ 120 S A+ E+L+S GI VFDLNEV+++ +Y+DGADEING MIKGGGAALTREKI+ASVA+ Sbjct: 52 SSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAE 111 Query: 121 KFVCIADGSKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCY 180 KF+CIAD SK V++LGKFPLPVEVIPM+ + VAR+L LGG P R + VVTDNG Sbjct: 112 KFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYR----QGVVTDNGNV 167 Query: 181 IIDVLGLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKL 230 I+DV G+ I DP +E+ IN I GVVT GLFA +GA+V L+GT DGVK + Sbjct: 168 ILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTI 217 >STM3063 [G] COG0120 Ribose 5-phosphate isomerase Sty Salmonella typhimurium LT2 Length = 219 Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/230 (60%), Positives = 172/230 (74%), Gaps = 13/230 (5%) Query: 1 MTQDELKQAVAKAAIEYVVDGEIIGVGTGSTANFFIDELGKIKHRIKGAVSACARTASPS 60 MTQDELK+AV AA++YV G I+GVGTGSTA FID LG +K +I+GAVS Sbjct: 1 MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVS--------- 51 Query: 61 SIXATAERLRSHGITVFDLNEVETMPVYIDGADEINGGGAMIKGGGAALTREKIVASVAQ 120 S A+ E+L+ GI VFDLNEV+++ +Y+DGADEING MIKGGGAALTREKI+ASVA+ Sbjct: 52 SSDASTEKLKGLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAE 111 Query: 121 KFVCIADGSKLVEVLGKFPLPVEVIPMSHAVVARKLAALGGEPRLRVKDGKPVVTDNGCY 180 KF+CIAD SK V++LGKFPLPVEVIPM+ + VAR+L LGG P R + VVTDNG Sbjct: 112 KFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYR----QNVVTDNGNV 167 Query: 181 IIDVLGLSITDPADVEDKINNIVGVVTNGLFARQGANVCLLGTADGVKKL 230 I+DV G+ I DP +E+ IN I GVVT GLFA +GA+V L+GT DGVK + Sbjct: 168 ILDVYGMEILDPIALENAINAIPGVVTVGLFANRGADVALIGTPDGVKTI 217