BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0074.p         (219 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM2562 [T] COG2204 Response regulator containing CheY-like rece...   233   2e-61
yfhA [T] COG2204 Response regulator containing CheY-like receive...   230   2e-60
ZyfhA [T] COG2204 Response regulator containing CheY-like receiv...   230   2e-60
ECs3420 [T] COG2204 Response regulator containing CheY-like rece...   230   2e-60
YPO2914 [T] COG2204 Response regulator containing CheY-like rece...   223   2e-58

>STM2562 [T] COG2204 Response regulator containing CheY-like receiver,
           AAA-type ATPase, and DNA-binding domains Sty Salmonella
           typhimurium LT2
          Length = 445

 Score =  233 bits (594), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 116/204 (56%), Positives = 153/204 (75%)

Query: 1   MPLPLQVKLLRVLQEKTVRQVGANQAGEVDVRIISATHRDLEAAMREGQFREDLYYRLNV 60
           MP PLQVKLLRVLQE+ VR +G+N+  ++DVRIISATHRDL  AM  G+FREDLYYRLNV
Sbjct: 241 MPAPLQVKLLRVLQERKVRPLGSNRDIDIDVRIISATHRDLPKAMARGEFREDLYYRLNV 300

Query: 61  VTLHLPALEERREDIALLANHFLKTIAAKYPKRLTGFAPDALEILSLAHWPGNVRQLYNV 120
           V+L +PAL ER EDI LLANH L+  A ++   +  F+ DA++ L  A WPGNVRQL NV
Sbjct: 301 VSLKIPALAERTEDIPLLANHLLRQSAQRHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV 360

Query: 121 VEQVCALSTAPLIPASLVQRALRTPTLDLLRYAEAKQKFERDYLIRLLKLTDGNVSDAAR 180
           +EQ  AL+++P+I  +LV++AL      L  +AEA+ +FE +YL +LL++T GNV+ AAR
Sbjct: 361 IEQCVALTSSPVISDALVEQALEGENTALPTFAEARNQFELNYLRKLLQITKGNVTHAAR 420

Query: 181 LADRNRTEFYRLLQKNGLDPRRFR 204
           +A RNRTEFY+LL ++ LD   F+
Sbjct: 421 MAGRNRTEFYKLLSRHELDANDFK 444


>yfhA [T] COG2204 Response regulator containing CheY-like receiver,
           AAA-type ATPase, and DNA-binding domains Eco Escherichia
           coli K12
          Length = 444

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/204 (55%), Positives = 152/204 (74%)

Query: 1   MPLPLQVKLLRVLQEKTVRQVGANQAGEVDVRIISATHRDLEAAMREGQFREDLYYRLNV 60
           MP PLQVKLLRVLQE+ VR +G+N+  +++VRIISATHRDL  AM  G+FREDLYYRLNV
Sbjct: 240 MPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNV 299

Query: 61  VTLHLPALEERREDIALLANHFLKTIAAKYPKRLTGFAPDALEILSLAHWPGNVRQLYNV 120
           V+L +PAL ER EDI LLANH L+  A ++   +  F+ DA++ L  A WPGNVRQL NV
Sbjct: 300 VSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV 359

Query: 121 VEQVCALSTAPLIPASLVQRALRTPTLDLLRYAEAKQKFERDYLIRLLKLTDGNVSDAAR 180
           +EQ  AL+++P+I  +LV++AL      L  + EA+ +FE +YL +LL++T GNV+ AAR
Sbjct: 360 IEQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAAR 419

Query: 181 LADRNRTEFYRLLQKNGLDPRRFR 204
           +A RNRTEFY+LL ++ LD   F+
Sbjct: 420 MAGRNRTEFYKLLSRHELDANDFK 443


>ZyfhA [T] COG2204 Response regulator containing CheY-like receiver,
           AAA-type ATPase, and DNA-binding domains EcZ Escherichia
           coli O157:H7 EDL933
          Length = 444

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/204 (55%), Positives = 152/204 (74%)

Query: 1   MPLPLQVKLLRVLQEKTVRQVGANQAGEVDVRIISATHRDLEAAMREGQFREDLYYRLNV 60
           MP PLQVKLLRVLQE+ VR +G+N+  +++VRIISATHRDL  AM  G+FREDLYYRLNV
Sbjct: 240 MPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNV 299

Query: 61  VTLHLPALEERREDIALLANHFLKTIAAKYPKRLTGFAPDALEILSLAHWPGNVRQLYNV 120
           V+L +PAL ER EDI LLANH L+  A ++   +  F+ DA++ L  A WPGNVRQL NV
Sbjct: 300 VSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV 359

Query: 121 VEQVCALSTAPLIPASLVQRALRTPTLDLLRYAEAKQKFERDYLIRLLKLTDGNVSDAAR 180
           +EQ  AL+++P+I  +LV++AL      L  + EA+ +FE +YL +LL++T GNV+ AAR
Sbjct: 360 IEQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAAR 419

Query: 181 LADRNRTEFYRLLQKNGLDPRRFR 204
           +A RNRTEFY+LL ++ LD   F+
Sbjct: 420 MAGRNRTEFYKLLSRHELDANDFK 443


>ECs3420 [T] COG2204 Response regulator containing CheY-like receiver,
           AAA-type ATPase, and DNA-binding domains Ecs Escherichia
           coli O157:H7
          Length = 444

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 114/204 (55%), Positives = 152/204 (74%)

Query: 1   MPLPLQVKLLRVLQEKTVRQVGANQAGEVDVRIISATHRDLEAAMREGQFREDLYYRLNV 60
           MP PLQVKLLRVLQE+ VR +G+N+  +++VRIISATHRDL  AM  G+FREDLYYRLNV
Sbjct: 240 MPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMARGEFREDLYYRLNV 299

Query: 61  VTLHLPALEERREDIALLANHFLKTIAAKYPKRLTGFAPDALEILSLAHWPGNVRQLYNV 120
           V+L +PAL ER EDI LLANH L+  A ++   +  F+ DA++ L  A WPGNVRQL NV
Sbjct: 300 VSLKIPALAERTEDIPLLANHLLRQAAERHKPFVRAFSTDAMKRLMTASWPGNVRQLVNV 359

Query: 121 VEQVCALSTAPLIPASLVQRALRTPTLDLLRYAEAKQKFERDYLIRLLKLTDGNVSDAAR 180
           +EQ  AL+++P+I  +LV++AL      L  + EA+ +FE +YL +LL++T GNV+ AAR
Sbjct: 360 IEQCVALTSSPVISDALVEQALEGENTALPTFVEARNQFELNYLRKLLQITKGNVTHAAR 419

Query: 181 LADRNRTEFYRLLQKNGLDPRRFR 204
           +A RNRTEFY+LL ++ LD   F+
Sbjct: 420 MAGRNRTEFYKLLSRHELDANDFK 443


>YPO2914 [T] COG2204 Response regulator containing CheY-like receiver,
           AAA-type ATPase, and DNA-binding domains Ype Yersinia
           pestis
          Length = 445

 Score =  223 bits (569), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/204 (54%), Positives = 149/204 (73%)

Query: 1   MPLPLQVKLLRVLQEKTVRQVGANQAGEVDVRIISATHRDLEAAMREGQFREDLYYRLNV 60
           MPL LQVKLLRVLQE+ VR +G+N+   ++VR+ISATHRDL  AM + +FREDLYYRLNV
Sbjct: 241 MPLSLQVKLLRVLQERKVRPLGSNRDLSINVRVISATHRDLPKAMAKNEFREDLYYRLNV 300

Query: 61  VTLHLPALEERREDIALLANHFLKTIAAKYPKRLTGFAPDALEILSLAHWPGNVRQLYNV 120
           V L +PAL ER EDI LLANH L+  A ++   +  F+ DA++ L  A WPGNVRQL NV
Sbjct: 301 VNLKIPALHERAEDIPLLANHLLRESAKRHKPFVRSFSNDAMKRLMTASWPGNVRQLVNV 360

Query: 121 VEQVCALSTAPLIPASLVQRALRTPTLDLLRYAEAKQKFERDYLIRLLKLTDGNVSDAAR 180
           +EQ  AL++AP+I  +LV++AL      L  + EA+ +FE +YL +LL++  GNV+ AAR
Sbjct: 361 IEQCVALTSAPVISEALVEQALEGENTVLPTFVEARNQFELNYLRKLLQIAKGNVTQAAR 420

Query: 181 LADRNRTEFYRLLQKNGLDPRRFR 204
           +A RNRTEFY+LL ++ LD   F+
Sbjct: 421 MAGRNRTEFYKLLSRHELDANDFK 444