BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0117.p (463 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3164 [R] COG0457 FOG Rso Ralstonia solanacearum 204 5e-52 CC1457 [R] COG0457 FOG Ccr Caulobacter vibrioides 100 8e-21 MTH72 [R] COG0457 FOG Mth Methanothermobacter thermautotrophicus 83 1e-15 MA1362 [R] COG0457 FOG Mac Methanosarcina acetivorans str.C2A 81 5e-15 MTH83 [R] COG0457 FOG Mth Methanothermobacter thermautotrophicus 80 9e-15 >RSc3164 [R] COG0457 FOG Rso Ralstonia solanacearum Length = 387 Score = 204 bits (518), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 149/396 (37%), Positives = 203/396 (51%), Gaps = 23/396 (5%) Query: 65 QALRLDDQRAQYWLAAGLVEHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQH 124 A++ + + + LAAG E A+ L L+L L A +G +A R Sbjct: 7 SAVQAIEHQVRQLLAAGRFEEAEALVRPPLASGSGPLVLWKLLAAALRPQGR-IAETRAI 65 Query: 125 EEAIDSYRRALRIDDKDADAHLNLALSLLVLGRLEQAWPLYEWRWE-GRSADPYRHATIP 183 +E + ++ D A +L+ +LL+LG E+ W Y +R+ +A R P Sbjct: 66 QEMLVAH------APGDFPARFDLSETLLLLGEFERGWREYRYRYSLAHTAAIERKVQRP 119 Query: 184 AWNGGSSLAGKRILLWAEQGQGDIIQFSRYVA-LILQAGAQVVLEVPASLLALMHSLAVP 242 W+G + G+ +L+ EQG GD QF R V ++GA+V+LEV A L+L Sbjct: 120 RWSG-QPIPGQTLLIHDEQGFGDTFQFLRMVPWAKARSGARVILEVNAETLSLARRSTGF 178 Query: 243 TPLTLVAMGEPLPEVDFQLPLMSLPLVCNTRADDIPAAVPYLCADPARRILWEERLAALA 302 +VA G P D LMSLP+ + D+P VPYL ADP R W++RLA L Sbjct: 179 D--HIVARGSLPPPFDAHCELMSLPMAMGLKPSDLPGPVPYLSADPLRIAQWQQRLAGLP 236 Query: 303 PRSPARMRIGLVCSGNAGNVNDARRSIELSRFAPLALARPQLDFFVIQPDLRQADRQWCE 362 R + LV +G + NDA RS+ L+R APLA P F IQ A Q + Sbjct: 237 -----RPLVALVWAGRPTHFNDANRSLTLARLAPLA--HPGATFLSIQKG--PAAAQSAD 287 Query: 363 QQPGWHWVGAA--INDFADTAAVLAGMDLVISVDTAAAHLAGAMACPVWIALPYAPDWRW 420 PG V + I DF DTAA+L+ DL+ISVD+A HLAGA+ PVW+ LP+ PDWRW Sbjct: 288 PPPGMSLVPLSDDILDFEDTAAILSIADLLISVDSAPVHLAGALGRPVWVMLPFVPDWRW 347 Query: 421 LLNAADSPWYPTARLFRQQQPGAWDDVILTLRAALA 456 LL D+PWYP RLFRQ G WD V+ + LA Sbjct: 348 LLERTDTPWYPGMRLFRQHARGNWDGVLSAMAGELA 383 >CC1457 [R] COG0457 FOG Ccr Caulobacter vibrioides Length = 596 Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 118/439 (26%), Positives = 185/439 (42%), Gaps = 35/439 (7%) Query: 48 ALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLVEHAQGQYEEALRYYDQALILAPEL 107 AL E R+ +A + + AL + + A W G V G ++ ++D++L LAP+ Sbjct: 168 ALRELNRESEAI-EVLKAALGANPEAAVLWNTLGTVLCNIGDAAGSIVFFDESLRLAPDF 226 Query: 108 VDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD---AHLNLALSLLVLGRLEQAWPL 164 A+ +R L + E A+ A+R D A LL LGR+ + W Sbjct: 227 SKAYHNRAFARLDLGEIEAALADCEAAMRSPGSPEDLAMMQFARATILLALGRVGEGWEA 286 Query: 165 YEWRWEGRSADPYRHATIPA--WNGGSSLAGKRILLWAEQGQGDIIQFSRYVALILQA-- 220 YE R+ +D R IP W+G L GKR+++ EQG GD + F+ + I++A Sbjct: 287 YESRFSPALSDAPRF-QIPGVRWSG-QDLRGKRLMITTEQGLGDEVMFANMLPDIVEALG 344 Query: 221 -GAQVVLEVPASLLALMH----SLAVPTPLTLVAMG---------EPLPEVDFQLPLMSL 266 + L V L L + V T+ G E D+ + Sbjct: 345 PDGFLSLAVERRLAPLFERTFPKVEVTAHRTIAYEGRVFRAAPYIENWDRFDYWAAIGDF 404 Query: 267 PLVCNTRADDIPAAVPYLCADPARRILWEERLAALAPRSPARMRIGLVCSGNAGNVNDAR 326 A+ P +L DPAR W+ +L L P ++GL+ N AR Sbjct: 405 LPSLRPTAEAFPKRNAFLQPDPARVAHWKAQLEKLGPGP----KVGLLWKSLKLNAERAR 460 Query: 327 RSIELSRFAPLALARPQLDFFVIQPDLRQADRQWCEQQPG---WHWVGAAIN-DFADTAA 382 + + P+ L P + F +Q + + + +++ G W G + D D AA Sbjct: 461 QFSPFHLWEPV-LHTPGVVFVNLQYGDCEEEIAFAKEELGVEIWQPEGIDLKADLDDVAA 519 Query: 383 VLAGMDLVISVDTAAAHLAGAMACPVWIALPYAPDWRWLLNAADSPWYPTARLFRQQQPG 442 + A +DLVI A +LAGA+ P+++ L A W L PWYP+ R F +Q G Sbjct: 520 LCAAVDLVIGFSNATINLAGAVGTPIFM-LTGASSWT-RLGTEYYPWYPSVRCFVTEQYG 577 Query: 443 AWDDVILTLRAALAVHGAS 461 W+ + + AL AS Sbjct: 578 VWEPTMGRVATALRDFAAS 596 >MTH72 [R] COG0457 FOG Mth Methanothermobacter thermautotrophicus Length = 403 Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 79/143 (55%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL E ALQ DP TW+ K AL + + + A +C +AL ++ + A+ W G Sbjct: 102 EALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWYNKGNG 161 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 + G+YEEAL Y++AL + E V+A ++ L++++EA++ Y RAL+ID +D Sbjct: 162 LRSLGKYEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDG 221 Query: 144 AHLNLALSLLVLGRLEQAWPLYE 166 N L +G+ E+A YE Sbjct: 222 TWNNKGALLDTIGKPEKAIECYE 244 Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 79/143 (55%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +A+ E+AL+ + A W+ K + E +++D A +C +AL ++ + + W G++ Sbjct: 238 KAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVL 297 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 G+YEEAL +++AL + PE DA +G L L++ EEA+ Y +AL+++ +D Sbjct: 298 LRKLGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKT 357 Query: 144 AHLNLALSLLVLGRLEQAWPLYE 166 +L LG+ ++A Y+ Sbjct: 358 LWYMQGKTLQKLGKHQKAKKSYK 380 Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 89/171 (52%), Gaps = 13/171 (7%) Query: 13 QGMSPSGKNDPQALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQ 72 G+ GK + +AL E+ALQ + + W+ KA + E +++D A +C +AL++D Q Sbjct: 160 NGLRSLGKYE-EALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQ 218 Query: 73 RAQYWLAAGLVEHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYR 132 W G + G+ E+A+ Y++AL + + A ++G L L++++EA++ Y Sbjct: 219 DDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYE 278 Query: 133 RALRIDDKDADAHLNLALSLLVLGRLEQAWPLYE------------WRWEG 171 +AL I+ ++ + N + L LG+ E+A +E W W+G Sbjct: 279 KALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWEWKG 329 Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 78/143 (54%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL ALQ DP TW+ K AL + + + A +C +AL ++ + A+ W G+V Sbjct: 204 EALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVV 263 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 +Y+EAL Y++AL + E + ++G L +L ++EEA++ + +AL I+ + AD Sbjct: 264 LEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINPEFAD 323 Query: 144 AHLNLALSLLVLGRLEQAWPLYE 166 A + L L + E+A YE Sbjct: 324 AWEWKGIILEDLKKPEEALKCYE 346 Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 66/115 (57%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL E+AL+ + +TW K L + +++ A +C +AL ++ + A W G++ Sbjct: 272 EALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWEWKGII 331 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRID 138 + EEAL+ Y++AL L P+ +G TL +L +H++A SY++AL+ID Sbjct: 332 LEDLKKPEEALKCYEKALKLNPQDKTLWYMQGKTLQKLGKHQKAKKSYKKALKID 386 Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 74/144 (51%) Query: 23 PQALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGL 82 +AL +AL+ P + H A + ++ + A +C + L+ + + A+ W G+ Sbjct: 33 KEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALKCYEKILKNNPKLAEAWNNKGV 92 Query: 83 VEHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDA 142 V +Y+EAL Y++AL + P+ ++G L + + E+AI+ Y +AL I+ K+A Sbjct: 93 VLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNA 152 Query: 143 DAHLNLALSLLVLGRLEQAWPLYE 166 A N L LG+ E+A YE Sbjct: 153 KAWYNKGNGLRSLGKYEEALECYE 176 >MA1362 [R] COG0457 FOG Mac Methanosarcina acetivorans str.C2A Length = 400 Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 45/142 (31%), Positives = 75/142 (52%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 QAL E+A++ DP D W+ E +++ A +A+ ++ + + W G Sbjct: 241 QALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFT 300 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 ++EEA+ Y +A L PE ++A+ S G LA+L+ EEA+++Y +AL +D AD Sbjct: 301 LSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAAD 360 Query: 144 AHLNLALSLLVLGRLEQAWPLY 165 + A+ L LGR E+A Y Sbjct: 361 SWFGKAVCLSFLGREEEAEDAY 382 Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 76/143 (53%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +A+ ++A++ DPG + W+ K + A + +A+ LD + W G+ Sbjct: 207 EAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELDPENDDAWNNMGID 266 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 +YEEA+ +D+A+ + E D ++G TL+++ + EEA+++YR+A ++D + + Sbjct: 267 LENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLE 326 Query: 144 AHLNLALSLLVLGRLEQAWPLYE 166 A+ +L L L E+A YE Sbjct: 327 AYTSLGFVLAQLKNFEEALETYE 349 Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 73/143 (51%) Query: 23 PQALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGL 82 +A+ E+ L+ P + W K + ++D A +A+ +D + W G+ Sbjct: 172 EEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGV 231 Query: 83 VEHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDA 142 + G + +AL+ Y++A+ L PE DA + G L L ++EEAI+++ +A+ I+ +++ Sbjct: 232 DLDSLGSHRQALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENS 291 Query: 143 DAHLNLALSLLVLGRLEQAWPLY 165 D N +L + R E+A Y Sbjct: 292 DVWYNKGFTLSQMHRFEEAVEAY 314 >MTH83 [R] COG0457 FOG Mth Methanothermobacter thermautotrophicus Length = 379 Score = 80.1 bits (196), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 81/143 (56%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL E+ALQ +P AD W+ K ++ +++ A +C +A+ L+ + + W G+ Sbjct: 136 EALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGIT 195 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 H YEEAL+ YD+ L L P+ A ++G L +++E+++ Y +AL+I+ K A+ Sbjct: 196 LHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAE 255 Query: 144 AHLNLALSLLVLGRLEQAWPLYE 166 A N + L LGR E+A YE Sbjct: 256 AWNNKGVVLSELGRYEEALECYE 278 Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%) Query: 29 LEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLVEHAQG 88 E+A++ +P W K + ++ A +C + L+L+ Q + W GLV + G Sbjct: 175 FEKAIELNPKNYRAWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELG 234 Query: 89 QYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDADAHLNL 148 +Y+E+L Y++AL + P+L +A ++G L+ L ++EEA++ Y +AL ID +D N Sbjct: 235 RYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNK 294 Query: 149 ALSLLVLGRLEQAWPLYE------------WRWEG 171 L L LG+ + A ++ W+W+G Sbjct: 295 GLVLEELGKYKDALECFQKALEINPEFADAWKWKG 329 Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 67/115 (58%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 ++L E+ALQ +P A+ W+ K + +++ A +C +AL +D + + W GLV Sbjct: 238 ESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLV 297 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRID 138 G+Y++AL + +AL + PE DA +G L L++ EE++ Y++AL+++ Sbjct: 298 LEELGKYKDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLN 352 Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 34/177 (19%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL E+ L+ +P A+ W+ K + + ++D A +C +AL+++ + A W LV Sbjct: 68 KALECYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALV 127 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGT--------------------------- 116 G+Y+EAL Y++AL + P+L DA ++G+ Sbjct: 128 LKELGRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYR 187 Query: 117 -------TLARLRQHEEAIDSYRRALRIDDKDADAHLNLALSLLVLGRLEQAWPLYE 166 TL L+ +EEA+ Y + L+++ +D A N L LGR +++ YE Sbjct: 188 AWGTKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYE 244 Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 36/121 (29%), Positives = 70/121 (57%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL ++ LQ +P W+ K + ++D + +C +AL+++ + A+ W G+V Sbjct: 204 EALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVV 263 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 G+YEEAL Y++AL + PE ++G L L ++++A++ +++AL I+ + AD Sbjct: 264 LSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEINPEFAD 323 Query: 144 A 144 A Sbjct: 324 A 324 Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 70/130 (53%) Query: 24 QALALLEEALQRDPGQADTWHRKAALHERARQWDAARQCIHQALRLDDQRAQYWLAAGLV 83 +AL +AL+ P + H A + ++ + A +C + L+ + + A+ W GLV Sbjct: 34 EALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKILKNNPKLAEAWNNKGLV 93 Query: 84 EHAQGQYEEALRYYDQALILAPELVDAHVSRGTTLARLRQHEEAIDSYRRALRIDDKDAD 143 G+Y+EAL Y++AL + P+ A ++ L L +++EA++ Y +AL+I+ K AD Sbjct: 94 LKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKALQINPKLAD 153 Query: 144 AHLNLALSLL 153 A N L+ Sbjct: 154 AWYNKGSVLI 163