BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0078.p (212 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2009 [S] COG3022 Uncharacterized protein conserved in bacteri... 323 1e-88 VC2355 [S] COG3022 Uncharacterized protein conserved in bacteria... 268 7e-72 YPO0462 [S] COG3022 Uncharacterized protein conserved in bacteri... 266 2e-71 STM0005 [S] COG3022 Uncharacterized protein conserved in bacteri... 254 7e-68 PA3539 [S] COG3022 Uncharacterized protein conserved in bacteria... 254 1e-67 >RSc2009 [S] COG3022 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 257 Score = 323 bits (829), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 154/212 (72%), Positives = 177/212 (83%) Query: 1 MLIVLSPAKSLDYDTPPTTDVHTTPAFVPRSAELIEVLKTKSPAEIGSLMGISDQLAVLN 60 M+IVLSPAKSLDYDTPP HT P F+ RSA LIE L+ SPA+IG+LM ISD LAVLN Sbjct: 1 MIIVLSPAKSLDYDTPPRIKTHTLPDFIERSAVLIETLRKLSPAQIGTLMHISDPLAVLN 60 Query: 61 VNRYASWSRKFSTKNAKQAVLAFNGDVYEGLDAASLNARQLDYLQGHVRILSGLYGMLRP 120 NRYA WS +F+ N+KQAVLAF+GDVY GLDA +L+A L + Q H+RILSGLYG+LRP Sbjct: 61 ANRYADWSTEFTADNSKQAVLAFDGDVYGGLDANTLSADDLQFAQQHLRILSGLYGVLRP 120 Query: 121 LDLMQPYRLEMGTKLANPGGKDLYAFWGSEITEALNGELVAQKTPVLVNLASEEYFKVVK 180 LD MQPYRLEMGT+LANPGGKDLYAFWG ++T ALN L A PVLVNLASEEYFKVV+ Sbjct: 121 LDRMQPYRLEMGTRLANPGGKDLYAFWGDDVTLALNALLQADDDPVLVNLASEEYFKVVR 180 Query: 181 PKLLKAQVIAPVFEDWKGGKYKIISFYAKRAR 212 PK+LKA+++ PVFEDWKGG+YKIISFYAKRAR Sbjct: 181 PKVLKARIVTPVFEDWKGGRYKIISFYAKRAR 212 >VC2355 [S] COG3022 Uncharacterized protein conserved in bacteria Vch Vibrio cholerae Length = 257 Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 126/212 (59%), Positives = 159/212 (75%) Query: 1 MLIVLSPAKSLDYDTPPTTDVHTTPAFVPRSAELIEVLKTKSPAEIGSLMGISDQLAVLN 60 MLIV+SPAK+LDY++P +T T P SAELI+V +T S ++ LM +SD++A LN Sbjct: 1 MLIVVSPAKTLDYESPVSTSNFTQPELTAHSAELIQVCRTLSSQDVSELMSVSDKIAGLN 60 Query: 61 VNRYASWSRKFSTKNAKQAVLAFNGDVYEGLDAASLNARQLDYLQGHVRILSGLYGMLRP 120 V R+A WS F+ NA+QA+ AF GDVY GL+A +L+ + LD+ Q H+R+LSGLYG+LRP Sbjct: 61 VARFAQWSETFTLDNARQAIFAFKGDVYTGLEAETLSPQDLDFAQQHLRMLSGLYGVLRP 120 Query: 121 LDLMQPYRLEMGTKLANPGGKDLYAFWGSEITEALNGELVAQKTPVLVNLASEEYFKVVK 180 LDLMQPYRLEMGTKLAN G +LY FWG ITE LN + AQ VLVNLAS EYFK V Sbjct: 121 LDLMQPYRLEMGTKLANARGANLYQFWGDIITEKLNQAIEAQGDNVLVNLASNEYFKAVN 180 Query: 181 PKLLKAQVIAPVFEDWKGGKYKIISFYAKRAR 212 PK L AQ++ P+F+D K G+YKIISF+AK+AR Sbjct: 181 PKRLNAQIVTPIFKDAKNGQYKIISFFAKKAR 212 >YPO0462 [S] COG3022 Uncharacterized protein conserved in bacteria Ype Yersinia pestis Length = 258 Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 127/212 (59%), Positives = 156/212 (73%) Query: 1 MLIVLSPAKSLDYDTPPTTDVHTTPAFVPRSAELIEVLKTKSPAEIGSLMGISDQLAVLN 60 MLI++SPAK+LDY +P T + P + +S LIE+ + +PA+I SLMGISD+LA LN Sbjct: 1 MLIIISPAKTLDYQSPLATTKFSQPEMLDKSQALIEICRELTPAQISSLMGISDKLAGLN 60 Query: 61 VNRYASWSRKFSTKNAKQAVLAFNGDVYEGLDAASLNARQLDYLQGHVRILSGLYGMLRP 120 R++ W F+ NA+QA+LAF GDVY G+ A S + D+ Q H+R+LSGLYG+LRP Sbjct: 61 AARFSEWQPDFTPANARQAILAFKGDVYTGMQAESFSEADFDFAQQHLRMLSGLYGLLRP 120 Query: 121 LDLMQPYRLEMGTKLANPGGKDLYAFWGSEITEALNGELVAQKTPVLVNLASEEYFKVVK 180 LDLMQPYRLEMGTKLANP GKDLYAFWG +ITE LN L Q +L+NLAS+EYFK VK Sbjct: 121 LDLMQPYRLEMGTKLANPRGKDLYAFWGDQITEKLNQALELQGDNILINLASDEYFKAVK 180 Query: 181 PKLLKAQVIAPVFEDWKGGKYKIISFYAKRAR 212 P L +I PVF D K GKYKIISFYAK+AR Sbjct: 181 PAKLSGSLIKPVFLDEKNGKYKIISFYAKKAR 212 >STM0005 [S] COG3022 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 257 Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 123/212 (58%), Positives = 152/212 (71%) Query: 1 MLIVLSPAKSLDYDTPPTTDVHTTPAFVPRSAELIEVLKTKSPAEIGSLMGISDQLAVLN 60 MLI++SPAK+LDY +P T +T P + S +LI+ + S +I LMGISD+LA LN Sbjct: 1 MLILISPAKTLDYQSPLATTRYTQPELLDHSQQLIQQARQLSAPQISRLMGISDKLADLN 60 Query: 61 VNRYASWSRKFSTKNAKQAVLAFNGDVYEGLDAASLNARQLDYLQGHVRILSGLYGMLRP 120 R+ W F+ NA+QA+LAF GDVY GL A + N D+ Q H+R+LSGLYG+LRP Sbjct: 61 ATRFHDWQPHFTPDNARQAILAFKGDVYTGLQAETFNDADFDFAQQHLRMLSGLYGVLRP 120 Query: 121 LDLMQPYRLEMGTKLANPGGKDLYAFWGSEITEALNGELVAQKTPVLVNLASEEYFKVVK 180 LDLMQPYRLEMG +L NP GKDLY FWG IT+ LN L AQ V+VNLASEEYFK VK Sbjct: 121 LDLMQPYRLEMGIRLENPRGKDLYQFWGDIITDKLNEALEAQGDRVVVNLASEEYFKSVK 180 Query: 181 PKLLKAQVIAPVFEDWKGGKYKIISFYAKRAR 212 PK L A++I PVF D K GK+K++SFYAK+AR Sbjct: 181 PKKLNAELIKPVFLDEKNGKFKVVSFYAKKAR 212 >PA3539 [S] COG3022 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 259 Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 125/212 (58%), Positives = 156/212 (73%) Query: 1 MLIVLSPAKSLDYDTPPTTDVHTTPAFVPRSAELIEVLKTKSPAEIGSLMGISDQLAVLN 60 ML+V+SPAK+LDY+TPP T T P ++ + ELI+ L+ +P +I LM +SD+LA LN Sbjct: 1 MLMVISPAKTLDYETPPVTHRFTQPQYLDHAQELIQQLRQLTPLQISELMKLSDKLAGLN 60 Query: 61 VNRYASWSRKFSTKNAKQAVLAFNGDVYEGLDAASLNARQLDYLQGHVRILSGLYGMLRP 120 RYASW +F+ +NAKQA+LAF GDVY GL+A + Q H+R+LSGLYG+LRP Sbjct: 61 AARYASWHPEFTPENAKQALLAFKGDVYTGLNAEDFGEDDFAFAQDHLRMLSGLYGVLRP 120 Query: 121 LDLMQPYRLEMGTKLANPGGKDLYAFWGSEITEALNGELVAQKTPVLVNLASEEYFKVVK 180 LDLMQPYRLEMGT+LAN GKDLYAFWG I++ LN L AQ VL+NLAS EYF VK Sbjct: 121 LDLMQPYRLEMGTRLANARGKDLYAFWGERISQWLNEALAAQGDDVLLNLASNEYFGAVK 180 Query: 181 PKLLKAQVIAPVFEDWKGGKYKIISFYAKRAR 212 K L+A+VI F+D K G+YKIISFYAK+AR Sbjct: 181 RKALQARVIDTEFKDLKNGQYKIISFYAKKAR 212