BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0073.p (407 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DR0235 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 252 9e-67 CC1323 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 215 2e-55 mlr4825 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 195 1e-49 all1235 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s... 192 2e-48 AF1954 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su... 181 3e-45 >DR0235 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Dra Deinococcus radiodurans Length = 561 Score = 252 bits (644), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 174/425 (40%), Positives = 220/425 (51%), Gaps = 22/425 (5%) Query: 1 MLTKDLFTPLAGARMSNGSLLLKDNVMPVDAELVTRLKKAGFTIFGTTTSPEFGTSYTTE 60 L KD + LAG + G+ +D + D ELV R + AG G T +PEF TE Sbjct: 124 FLVKDFGSRLAGVPHTGGTRAYRDQIPEWDDELVRRWQAAGLLPLGKTNTPEFALMGVTE 183 Query: 61 SRLFGATRNPWSLDHSCGGSSGAAAALVAARVLPIAHGNDGGGSLRVPASACGVFGLKPS 120 L G TRNPW L + GGSSG +A+ VAA ++P+A DGGGS+R+PAS CG+FGLKPS Sbjct: 184 PELHGPTRNPWDLGRTPGGSSGGSASAVAAGIVPLAGAGDGGGSIRIPASCCGLFGLKPS 243 Query: 121 RGLMPMGPLAGEGWAGMSTSHVMSLSVRDSAAVLDQLAGADLGAPYAAPHYRQSFLAAAT 180 RG +P G GE W G + HV++ SVRDSAA+LD G D GA P + + + Sbjct: 244 RGRVPCGDGVGEPWQGAAVEHVLTRSVRDSAALLDLEQGPDAGAALFLPSPERPY-SEEV 302 Query: 181 GAAPQGLRIGLVTHLP-PWPTHPDCSEAVQRTAALCQQLGHHVEETCLPVDGLEFYDTVF 239 G P LRIG T P HP+C AVQ A L + LGH VEE LP DG Sbjct: 303 GREPGRLRIGFSTAHPLGRSVHPECVAAVQGAARLLESLGHEVEEVALPWDGPALAQAFL 362 Query: 240 TIIGSQTRNLMNLLVRMAGQPLDEQALEARHRVILRDKGQLSGADYAAAVDYLHAFGRRM 299 + +T + L G+P +EA ++ + S AD+AAA + R M Sbjct: 363 MLYFGETGASLAALRDTLGRPARASDVEAVTWLLGQLGRSYSAADFAAARASWNVHARAM 422 Query: 300 AELMQRYDLILTPTMAQPPARIGALTVREEQS--------------------VAELIHTF 339 Q YDL+LTP +A PP +IG L R Q+ V L Sbjct: 423 GRFHQNYDLLLTPVLATPPLQIGELQPRGVQAALLRAAQQMDVSGLLRRSGQVDALATDI 482 Query: 340 HGFSPFTALCNASGQPAMSVPLHWNDQGLPIGSHFCAGFGDDTLLLAVAAQLEQAAPWAH 399 P+T L N +GQPAMSVPLHW GLP+G F A + +LL +A QLEQA PW Sbjct: 483 LEKMPYTQLANLTGQPAMSVPLHWTADGLPVGVQFVAPLAREDVLLRLAGQLEQARPWFA 542 Query: 400 RRPPV 404 RRP V Sbjct: 543 RRPTV 547 >CC1323 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Ccr Caulobacter vibrioides Length = 521 Score = 215 bits (547), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 156/413 (37%), Positives = 214/413 (51%), Gaps = 23/413 (5%) Query: 1 MLTKDLFTPLAGARMSNGS-LLLKDNVMPVDAELVTRLKKAGFTIFGTTTSPEFGTSYTT 59 L KDL P G R G+ L + AGF G +++PE+G TT Sbjct: 125 FLVKDL-DPYKGVRTRYGTRATLGAKPDTEQTPYIDAFDAAGFVTIGKSSTPEYGFLPTT 183 Query: 60 ESRLFGATRNPWSLDHSCGGSSGAAAALVAARVLPIAHGNDGGGSLRVPASACGVFGLKP 119 E F TRNPW++ HS GGSSG AAA A+ ++ IAH +DGGGS+R+PA+ CG+FG+KP Sbjct: 184 EPMGFLPTRNPWNVKHSSGGSSGGAAAATASGMVTIAHASDGGGSIRIPAANCGLFGMKP 243 Query: 120 SRGLMPMGPLAGEGWAGMSTSHVMSLSVRDSAAVLDQLAGADLGAPYAAPHYRQSFLAAA 179 SRG M G +S SH +S SVRDSAA+ D GA + + Sbjct: 244 SRGRMIPNRPTSRG-IDLSVSHCVSHSVRDSAALFAASERTDAGAAFKP-------VGVV 295 Query: 180 TGAAPQGLRIGLV----THLPPWPTHPDCSEAVQRTAALCQQLGHHVEETCLPVDGLEFY 235 T + L++GLV T L P HP+ AV A L + LGH VE T P+DG +F Sbjct: 296 TAPLKRKLKVGLVMNTGTGLTP---HPEVQAAVNNAAKLLKDLGHRVEPTNWPMDGNQFG 352 Query: 236 DTVFTIIGSQTRNLMNLLVRMAGQPLDEQALEARHRVILRDKGQLSGADYAAAVDYLHAF 295 + S L+ + + G+ D LE + L AA++ L+A Sbjct: 353 QDFTVLWASGAAELVAGIGKAMGRKPDANVLEPFSLGMAELVNTLPQGALQAAMERLNAT 412 Query: 296 GRRMAELMQRYDLILTPTMAQPPARIGALT--VREEQSVAELIHTFHGFSPFTALCNASG 353 + + +YD+IL+P + +PP +G + V E+ A L+ + G++P + N +G Sbjct: 413 IKAYDTWLTKYDVILSPVLGKPPVELGYVAGWVPFEELQARLL-AYVGYTP---VQNVAG 468 Query: 354 QPAMSVPLHWNDQGLPIGSHFCAGFGDDTLLLAVAAQLEQAAPWAHRRPPVCA 406 PAMSVPLHW GLP+G F GD+ L A+A QLE AAPWAHR+PPV A Sbjct: 469 APAMSVPLHWTADGLPVGVQFAGRAGDEATLFALAYQLEAAAPWAHRKPPVSA 521 >mlr4825 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Mlo Mesorhizobium loti Length = 498 Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 152/422 (36%), Positives = 218/422 (51%), Gaps = 24/422 (5%) Query: 4 KDLFTPLAGARMSNGSLLLKDNVMPVDAELVTRLKKAGFTIFGTTTSPEFGTSYTTESRL 63 KDL + G S+G + +V V++ + R AG T+TSPE G TESR Sbjct: 76 KDLGIAVKGVP-SHGGSRIPASVPDVNSVMTDRYLAAGLIPIVTSTSPEHGLRLMTESRA 134 Query: 64 FGATRNPWSLDHSCGGSSGAAAALVAARVLPIAHGNDGGGSLRVPASACGVFGLKPSRGL 123 FG TRNPW+ H+ GGSSG AAALVAA V+P+AH +DGGGS+RVP++ G+ GLK SRG Sbjct: 135 FGITRNPWNTGHTSGGSSGGAAALVAAGVVPVAHASDGGGSIRVPSACTGLVGLKTSRGR 194 Query: 124 MPMGPLAGEGWAGMSTSHVMSLSVRDSAAVLDQLAGADLGAPYAAPHYRQSFLAAATGAA 183 +P+ PL E W GM H ++ SVRDSA +LD G D +PYAA + +F AAA Sbjct: 195 IPLTPLVSESWYGMVVDHAVTRSVRDSALLLDLTHGPDSLSPYAALPPKGTF-AAAAARD 253 Query: 184 PQGLRIGLVTHLP-PWPTHPDCSEAVQRTAALCQQLGHHVEETCLPVDGLEFYDTVFTII 242 P L + + P P + +A+ L ++ GH V E LP G +F + Sbjct: 254 PGKLSLAVYRKSPLGLPISAETMKALDTAVVLAREGGHTVMEIDLPFIGRDFLADFCRTV 313 Query: 243 GSQTRNLMNLLVRMAGQPLDEQALEARHRVILRDKGQLSGADYAAAVDYLHAFGRRMAEL 302 S + G+ + +E RV+ R +S + A + LHA RRM E Sbjct: 314 ASAVAGTLRAEALRVGRSVTGD-VERATRVLGRLGEMVSAGEIYAGLQRLHAASRRMIEE 372 Query: 303 MQRYDLILTPTMAQPPARIGALTVR-EEQSVAELIHTFHG-------------------F 342 +YD +L P +A PP GAL + ++ + L+ H F Sbjct: 373 TAQYDAVLMPVIAHPPLACGALDPKGADELIENLLDKLHLTPLLKLKPLFGQLMDKSLLF 432 Query: 343 SPFTALCNASGQPAMSVPLHWNDQGLPIGSHFCAGFGDDTLLLAVAAQLEQAAPWAHRRP 402 + + A+ N SGQP++++P+H + GLP+G GD+ LL+ AAQ+E+ + W RR Sbjct: 433 THWPAIHNVSGQPSIALPVHVTEAGLPLGIQAAGRPGDEETLLSFAAQMEKLSGWLKRRA 492 Query: 403 PV 404 P+ Sbjct: 493 PL 494 >all1235 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Nos Nostoc sp. PCC 7120 Length = 467 Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 146/401 (36%), Positives = 214/401 (53%), Gaps = 23/401 (5%) Query: 4 KDLFTPLAGARMSNGSLLLKDNVMPVDAELVTRLKKAGFTIFGTTTSPEFGTSYTTESRL 63 KDL +AG + G+ L +N+ D +VTR+K+AGFTI G T + E G+ TE Sbjct: 82 KDL-NAVAGVPCTYGNPALLNNIPQFDDGVVTRIKQAGFTILGKTATSELGSFPYTEPTG 140 Query: 64 FGATRNPWSLDHSCGGSSGAAAALVAARVLPIAHGNDGGGSLRVPASACGVFGLKPSRGL 123 F RNPW+L+++ GGSSG AAA VAA + IA G+DGGGS+R PA+ CGV G+KP+RG Sbjct: 141 FVPARNPWNLEYTPGGSSGGAAAAVAAGLCAIAQGSDGGGSIRGPAACCGVVGIKPARGR 200 Query: 124 MPMGPLAGEGWAGMSTSHVMSLSVRDSAAVLDQLAGADLGAPYAAPHYRQSFLAAATGAA 183 + P+ G+ AG+ST+ ++ +V D+AA+LD ++G G PY P SFL AA Sbjct: 201 VSKAPV-GDRLAGISTNGPIARTVADAAALLDAMSGYVTGDPYWLPDPEPSFLNAAQ-TP 258 Query: 184 PQGLRIGLVTHLPPW-PTHPDCSEAVQRTAALCQQLGHHVEETCLPVDGL-EFYDTVFTI 241 P LRI T +PP +C + V T L +QLGHH+E+ L + GL E + V+ Sbjct: 259 PTQLRIAFATDIPPLGEADANCQQGVLTTVKLLEQLGHHIEQKSLDLSGLVEPFQIVWQ- 317 Query: 242 IGSQTRNLMNLLVRMAGQPLDEQALEARHRVILRDKGQLSGADYAAAVDYLHAFGRRMAE 301 +AG L + L+ +R +L G + ADY AV + R++ Sbjct: 318 ------------SGVAGSGLPPEILQPVNRWLLARTGTV--ADYIQAVYKMQIVARQIVA 363 Query: 302 LMQRYDLILTPTMAQPPARIGALTVREEQSVAELIHTFHGFSPFTALCNASGQPAMSVPL 361 D+++ P P R+G + + I + P L NA+GQPA+++P Sbjct: 364 FFDNIDVLVLPVYLHSPIRVGEWAALSPEDTFQQIINWVAPCP---LANATGQPAIALPA 420 Query: 362 HWNDQGLPIGSHFCAGFGDDTLLLAVAAQLEQAAPWAHRRP 402 ++ GLPI + L+++AAQ+E A PW RP Sbjct: 421 GFDRNGLPISVQLIGRPAAEATLISLAAQIEVANPWNKYRP 461 >AF1954 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases Afu Archaeoglobus fulgidus Length = 453 Score = 181 bits (458), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 137/397 (34%), Positives = 197/397 (49%), Gaps = 25/397 (6%) Query: 12 GARMSNGSLLLKDNVMPVDAELVTRLKKAGFTIFGTTTSPEFGTSYTTESRLFGATRNPW 71 G R + S ++ V DA LV RLKKAG I G T PEFG T++ +FG TRNPW Sbjct: 74 GIRTTYCSKFYENYVPEEDAVLVERLKKAGAVIIGKTNMPEFGLIAYTDNPMFGPTRNPW 133 Query: 72 SLDHSCGGSSGAAAALVAARVLPIAHGNDGGGSLRVPASACGVFGLKPSRGLMPMGPLAG 131 L + GGSSG +AA VAA +LP+A GNDGGGS+R+PAS CG++GLKPS G +P P + Sbjct: 134 DLSRTVGGSSGGSAAAVAAGILPVASGNDGGGSIRIPASFCGLYGLKPSFGRVPCYP-SL 192 Query: 132 EGWAGMSTSHVMSLSVRDSAAVLDQLAGADLGAPYAAPHYRQSFLAAATGAAPQGLRIGL 191 + G+ + ++ V D+A +LD + G D+ + P S+L A P G+RI Sbjct: 193 PIFIGLHSEGFLTRYVEDTALMLDLVKGWDIRDVKSLPDEEFSYLKAIE-EHPDGVRIAF 251 Query: 192 VTHLPPWPTHPDCSEAVQRTAALCQQLGHHVEETCLPVDGLEFYDTVFTIIGSQTRNLMN 251 L P+ E V+ A ++ G VEE L + LE + L+ Sbjct: 252 SPDLGYAIVDPEVEEKVREAAFKLEKFG-EVEEVKLSLPNLE-------------QELVT 297 Query: 252 LLVRMAGQPLDEQALEARHRVILRDKGQLSGADYAAAVDYLHAFGRRMA------ELMQR 305 +V + ++ E G ++ A +Y+ R+M + + Sbjct: 298 KVVLEVVTFIGDRMAEWEKVAFPPYLGFMALAQSLTFREYIKIEERKMELWKALRGIFEE 357 Query: 306 YDLILTPTMAQPPARIGALTVREEQSVAELIHTFHGFSPFTALCNASGQPAMSVPLHWND 365 YD ++TPT+A P IG L E +A T G+ PFT N +GQPA S+P ++ Sbjct: 358 YDYLITPTVACKPFEIGKLGPEE---IAGKAITPIGWMPFTYPFNFTGQPAASIPAGFSK 414 Query: 366 QGLPIGSHFCAGFGDDTLLLAVAAQLEQAAPWAHRRP 402 +GLPIG DD +L V+ + +PW R P Sbjct: 415 EGLPIGMQIVGKPYDDVGVLKVSKAFQDVSPWQDRYP 451