BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0070.p (248 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4543 [S] COG1496 Uncharacterized conserved protein Pae Pseudom... 257 2e-68 yfiH [S] COG1496 Uncharacterized conserved protein Eco Escherich... 254 1e-67 ZyfiH [S] COG1496 Uncharacterized conserved protein EcZ Escheric... 250 2e-66 ECs3456 [S] COG1496 Uncharacterized conserved protein Ecs Escher... 250 2e-66 STM2661 [S] COG1496 Uncharacterized conserved protein Sty Salmon... 243 3e-64 >PA4543 [S] COG1496 Uncharacterized conserved protein Pae Pseudomonas aeruginosa Length = 242 Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 144/247 (58%), Positives = 167/247 (67%), Gaps = 12/247 (4%) Query: 4 LLPDWTAPANIGALTTLRAGGFSPAPYDDGQGGPGLNLGLHVEDDAALVARNRALLGRLL 63 L PDW APA + A T R+GG S AP+D LNLG HV+DD V NR L L Sbjct: 5 LTPDWPAPARVRACVTTRSGGVSQAPFD------SLNLGAHVDDDPRAVEENRRRLTERL 58 Query: 64 PSEPAWLTQVHGVTVLDAAALPDQP-TADACISSTPGAVCVMMTADCLPVLFCDRAGSVV 122 P+WL QVHGVTV++A P + ADA S+ PG C +MTADCLP LFCDR+G+ V Sbjct: 59 ECRPSWLDQVHGVTVVEAD--PSRVLRADASWSAMPGVACTIMTADCLPALFCDRSGTRV 116 Query: 123 GAAHAGWRGLAAGVLEQTVAAMRARGAQEIMAWLGPAIGPDHFEVGGEVRQAFVAQQAAA 182 AAHAGWRGLAAGVLE TV ++ G E++ WLGPAIGP FEVGGEVR AFVA A A Sbjct: 117 AAAHAGWRGLAAGVLEATVDSLGVPG-DELLVWLGPAIGPRAFEVGGEVRDAFVAAHAEA 175 Query: 183 AAAFRDYPGRPGKYLADIYQLARQRLAAVGVTEVSGGGLCTVADT-RFYSYRRDKTTGRM 241 +AF PG+++ADIY+LAR RL A GVT V GGG CT +DT RFYSYRR TGR Sbjct: 176 RSAFVP-SANPGRFMADIYRLARIRLGAHGVTAVHGGGFCTFSDTARFYSYRRSSRTGRF 234 Query: 242 ASLVWLK 248 ASLVWL+ Sbjct: 235 ASLVWLQ 241 >yfiH [S] COG1496 Uncharacterized conserved protein Eco Escherichia coli K12 Length = 243 Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 140/250 (56%), Positives = 165/250 (66%), Gaps = 14/250 (5%) Query: 2 ELLLPDWTAPANIGALTTLRAGGFSPAPYDDGQGGPGLNLGLHVEDDAALVARNRALL-- 59 +L++P W P + A ++ R GG S PYD LNLG H D+ V NR L Sbjct: 3 KLIVPQWPQPKGVAACSSTRIGGVSLPPYDS------LNLGAHCGDNPDHVEENRKRLFA 56 Query: 60 GRLLPSEPAWLTQVHGVTVLDAAALP-DQPTADACISSTPGAVCVMMTADCLPVLFCDRA 118 LPS+P WL QVHG VL P ADA S+TPG VC +MTADCLPVLFC+RA Sbjct: 57 AGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNRA 116 Query: 119 GSVVGAAHAGWRGLAAGVLEQTVAAMRARGAQEIMAWLGPAIGPDHFEVGGEVRQAFVAQ 178 G+ V AAHAGWRGL AGVLE+TV+ A + I+AWLGPAIGP FEVGGEVR+AF+A Sbjct: 117 GTEVAAAHAGWRGLCAGVLEETVSCF-ADNPENILAWLGPAIGPRAFEVGGEVREAFMAV 175 Query: 179 QAAAAAAFRDYPGRPGKYLADIYQLARQRLAAVGVTEVSGGGLCTVADTR-FYSYRRDKT 237 A A+AAF + KYLADIYQLARQRLA VGV ++ GG CT + F+SYRRDKT Sbjct: 176 DAKASAAFIQH---GDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKT 232 Query: 238 TGRMASLVWL 247 TGRMAS +WL Sbjct: 233 TGRMASFIWL 242 >ZyfiH [S] COG1496 Uncharacterized conserved protein EcZ Escherichia coli O157:H7 EDL933 Length = 243 Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 138/250 (55%), Positives = 164/250 (65%), Gaps = 14/250 (5%) Query: 2 ELLLPDWTAPANIGALTTLRAGGFSPAPYDDGQGGPGLNLGLHVEDDAALVARNRALL-- 59 +L++P W P + A ++ R GG S PYD LNLG H D+ V NR L Sbjct: 3 KLIVPQWPLPKGVAACSSTRIGGVSLPPYD------SLNLGAHCGDNPDHVEENRKRLFA 56 Query: 60 GRLLPSEPAWLTQVHGVTVLDAAALP-DQPTADACISSTPGAVCVMMTADCLPVLFCDRA 118 LPS+P WL QVHG VL+ P ADA S+TPG VC +MTADCLPVLFC+RA Sbjct: 57 AGNLPSKPVWLEQVHGKDVLNLTGEPYASKRADASYSNTPGRVCAVMTADCLPVLFCNRA 116 Query: 119 GSVVGAAHAGWRGLAAGVLEQTVAAMRARGAQEIMAWLGPAIGPDHFEVGGEVRQAFVAQ 178 G+ V AAHAGWRGL AGVLE+TV+ A + I+AWLGPAIGP FEVG EVR+AF+A Sbjct: 117 GTEVAAAHAGWRGLCAGVLEETVSCF-ADNPENILAWLGPAIGPRAFEVGAEVREAFMAV 175 Query: 179 QAAAAAAFRDYPGRPGKYLADIYQLARQRLAAVGVTEVSGGGLCTVADTR-FYSYRRDKT 237 A A+ AF + KYLADIYQLARQRLA VGV ++ GG CT + F+SYRRDKT Sbjct: 176 DAEASTAFIQH---GDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKT 232 Query: 238 TGRMASLVWL 247 TGRMAS +WL Sbjct: 233 TGRMASFIWL 242 >ECs3456 [S] COG1496 Uncharacterized conserved protein Ecs Escherichia coli O157:H7 Length = 243 Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 138/250 (55%), Positives = 164/250 (65%), Gaps = 14/250 (5%) Query: 2 ELLLPDWTAPANIGALTTLRAGGFSPAPYDDGQGGPGLNLGLHVEDDAALVARNRALL-- 59 +L++P W P + A ++ R GG S PYD LNLG H D+ V NR L Sbjct: 3 KLIVPQWPLPKGVAACSSTRIGGVSLPPYD------SLNLGAHCGDNPDHVEENRKRLFA 56 Query: 60 GRLLPSEPAWLTQVHGVTVLDAAALP-DQPTADACISSTPGAVCVMMTADCLPVLFCDRA 118 LPS+P WL QVHG VL+ P ADA S+TPG VC +MTADCLPVLFC+RA Sbjct: 57 AGNLPSKPVWLEQVHGKDVLNLTGEPYASKRADASYSNTPGRVCAVMTADCLPVLFCNRA 116 Query: 119 GSVVGAAHAGWRGLAAGVLEQTVAAMRARGAQEIMAWLGPAIGPDHFEVGGEVRQAFVAQ 178 G+ V AAHAGWRGL AGVLE+TV+ A + I+AWLGPAIGP FEVG EVR+AF+A Sbjct: 117 GTEVAAAHAGWRGLCAGVLEETVSCF-ADNPENILAWLGPAIGPRAFEVGAEVREAFMAV 175 Query: 179 QAAAAAAFRDYPGRPGKYLADIYQLARQRLAAVGVTEVSGGGLCTVADTR-FYSYRRDKT 237 A A+ AF + KYLADIYQLARQRLA VGV ++ GG CT + F+SYRRDKT Sbjct: 176 DAEASTAFIQH---GDKYLADIYQLARQRLANVGVEQIFGGDRCTYTENETFFSYRRDKT 232 Query: 238 TGRMASLVWL 247 TGRMAS +WL Sbjct: 233 TGRMASFIWL 242 >STM2661 [S] COG1496 Uncharacterized conserved protein Sty Salmonella typhimurium LT2 Length = 243 Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 135/249 (54%), Positives = 159/249 (63%), Gaps = 14/249 (5%) Query: 3 LLLPDWTAPANIGALTTLRAGGFSPAPYDDGQGGPGLNLGLHVEDDAALVARNRALL--G 60 L++P W P + A ++ R GG S PYD LNLG H D+ V NR L Sbjct: 4 LIVPQWPLPKGVAACSSTRIGGVSLPPYDS------LNLGAHCGDNPEHVEENRKRLFAA 57 Query: 61 RLLPSEPAWLTQVHGVTVLDAAALP-DQPTADACISSTPGAVCVMMTADCLPVLFCDRAG 119 LPS+P WL QVHG VL P ADA S+TPG VC +MTADCLPVLFC+R G Sbjct: 58 GNLPSKPVWLEQVHGKNVLRLTGEPYASKRADASYSNTPGTVCAVMTADCLPVLFCNREG 117 Query: 120 SVVGAAHAGWRGLAAGVLEQTVAAMRARGAQEIMAWLGPAIGPDHFEVGGEVRQAFVAQQ 179 + V AAHAGWRGL GVLE+TV A + I+AWLGPAIGP FEVG EVR AF+A+ Sbjct: 118 TEVAAAHAGWRGLCEGVLEETVTCF-ADKPENIIAWLGPAIGPTAFEVGPEVRDAFLAKD 176 Query: 180 AAAAAAFRDYPGRPGKYLADIYQLARQRLAAVGVTEVSGGGLCTVADTR-FYSYRRDKTT 238 A A +AF + K+LADIYQLARQRLA GV V GG CT +++ F+SYRRDKTT Sbjct: 177 AQADSAFLPH---GEKFLADIYQLARQRLANTGVEHVYGGDRCTFSESETFFSYRRDKTT 233 Query: 239 GRMASLVWL 247 GRMAS +WL Sbjct: 234 GRMASFIWL 242