BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0047.p         (336 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1999 [G] COG2301 Citrate lyase beta subunit Rso Ralstonia sol...   254   2e-67

>RSc1999 [G] COG2301 Citrate lyase beta subunit Rso Ralstonia solanacearum
          Length = 320

 Score =  254 bits (648), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 132/215 (61%), Positives = 156/215 (72%), Gaps = 1/215 (0%)

Query: 1   MRKSMALQQELGPLFDITFDCEDGAAAGNETAHAELVAALITGPDNVHRRIGARLHDVSH 60
           MRKS+ALQQ LGP+FDITFDCEDGAA G E AHAEL A LI   DN   R+G R+HD +H
Sbjct: 24  MRKSLALQQALGPVFDITFDCEDGAAVGQERAHAELAARLINSDDNRFNRVGVRIHDPNH 83

Query: 61  PHFEQDVAILCGTAARELAYVMLPKPEGIDDVLRALESIQRAAHAAGRS-DLPVQVLVET 119
             + QDV IL G A R LAYV +PK   + +V R  + + +AA AAG +  LP+ VL+ET
Sbjct: 84  DAWAQDVDILVGQAGRRLAYVTVPKVRDVVEVARVTDRVNQAARAAGIARHLPIHVLIET 143

Query: 120 HGALADAWKIAALPQVQSLSFGVMDFVSAHYGAIPGSAMRSPGQFDHPLVRRAKLDISAA 179
           HGALA  + IAAL QV+ LSFG+MDFVSAH GAIPG+AM SP QF+HPL+RRA  DI+AA
Sbjct: 144 HGALAQVFDIAALVQVECLSFGLMDFVSAHNGAIPGAAMGSPEQFEHPLIRRALTDIAAA 203

Query: 180 CHAHGKVPSHNVTTDIKNPAAVADDARRGTGIWLY 214
           CHAHGKVPSHNV+TDIK P     DA R    + Y
Sbjct: 204 CHAHGKVPSHNVSTDIKRPDRAGTDAARARNAFGY 238