BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0039.p (500 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1991 [C] COG0372 Citrate synthase Rso Ralstonia solanacearum 728 0.0 SMc02087 [C] COG0372 Citrate synthase Sme Sinorhizobium meliloti 655 0.0 BMEI0836 [C] COG0372 Citrate synthase Bme Brucella melitensis 654 0.0 AGc2572 [C] COG0372 Citrate synthase Atu Agrobacterium tumefacie... 648 0.0 mlr0629 [C] COG0372 Citrate synthase Mlo Mesorhizobium loti 643 0.0 >RSc1991 [C] COG0372 Citrate synthase Rso Ralstonia solanacearum Length = 433 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/428 (81%), Positives = 383/428 (89%) Query: 50 MSNTDIKATLSFSDGSPSVDFPVYKGSIGPDVIDIRKLYGATGKFTYDPGFMSTASCNSS 109 M+ +D+KATLSFSDGSPSV+ P+Y G++GPDVIDIRKLYG TGKFTYDPGFMSTASCNS Sbjct: 1 MTPSDVKATLSFSDGSPSVELPIYTGTVGPDVIDIRKLYGQTGKFTYDPGFMSTASCNSK 60 Query: 110 ITYIDGDKGELLYRGYPIEQLAVNCDFLESCYLLLHGELPNAEQKKVFVNTVTQHTMVHE 169 ITYIDGDKGELLYRGY I+ LA CDFLE CYLLL GELPNA+QK F +TV HTMVHE Sbjct: 61 ITYIDGDKGELLYRGYAIDDLAGKCDFLEICYLLLKGELPNAKQKDEFNSTVMNHTMVHE 120 Query: 170 QMNFFFRGFRRDAHPMAVLTGSVGALSAFYHDSLDISNANHREVSAIRMIAKLPTLVAMA 229 QM FF RGFRRDAHPMAVLTG VGA+SAFY D+ +I+++ RE+S IR+IAKLPTLVAMA Sbjct: 121 QMQFFLRGFRRDAHPMAVLTGLVGAMSAFYPDAANINDSREREISQIRLIAKLPTLVAMA 180 Query: 230 YKYSIGQPFVYPRNDLSYTANFMRMMFANPCEEYQVNEVLVRALDRILILHADHEQNAST 289 YKY+IGQP +YP+N+LSYT NFMRMMFA PCE+Y+VN VL RALDRI ILHADHEQNAST Sbjct: 181 YKYNIGQPLIYPQNNLSYTGNFMRMMFATPCEDYKVNPVLERALDRIFILHADHEQNAST 240 Query: 290 STVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLEQIGSVDKIPEFIKQVKDKN 349 STVRLAGSSG NP A IAAGIACLWGPAHGGANEAALNMLE+IGSVDKI EFIKQVKDKN Sbjct: 241 STVRLAGSSGTNPIAAIAAGIACLWGPAHGGANEAALNMLEEIGSVDKIDEFIKQVKDKN 300 Query: 350 SGVKLMGFGHRVYKNYDPRAKLMRETCYEVLNELGLHDDPLFKLAMELEKIALEDEYFVS 409 SGV+LMGFGHRVYKNYDPRAKLMRETC+EVL ELGL +D LFKLAM LEKIALEDEYFVS Sbjct: 301 SGVRLMGFGHRVYKNYDPRAKLMRETCHEVLQELGLENDRLFKLAMALEKIALEDEYFVS 360 Query: 410 RKLYPNVDFYSGIVQRALGIPTSMFTCIFAMARTIGWIAQWNEMISDPEQKIGRPRQLFV 469 RKLYPNVDFYSGIVQRALGIPTSMFTCIFA+AR++GWIAQW EMI+DPE KIGRPRQLF Sbjct: 361 RKLYPNVDFYSGIVQRALGIPTSMFTCIFALARSVGWIAQWEEMITDPEYKIGRPRQLFN 420 Query: 470 GSPRRDPP 477 G+ R P Sbjct: 421 GAATRAVP 428 >SMc02087 [C] COG0372 Citrate synthase Sme Sinorhizobium meliloti Length = 429 Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/426 (72%), Positives = 355/426 (83%), Gaps = 2/426 (0%) Query: 53 TDIKATLSFSDGSPSVDFPVYKGSIGPDVIDIRKLYGATGKFTYDPGFMSTASCNSSITY 112 ++ AT++F G S D PV GSIGPDV+DI LY T FTYDPGF STASC S ITY Sbjct: 2 SEKSATVTF--GGKSADLPVRSGSIGPDVVDIGSLYKQTTMFTYDPGFTSTASCESKITY 59 Query: 113 IDGDKGELLYRGYPIEQLAVNCDFLESCYLLLHGELPNAEQKKVFVNTVTQHTMVHEQMN 172 IDGD+G LL+RG+PIEQLA + DFLE CYLLL+GELP QK F VT HTMVHEQM+ Sbjct: 60 IDGDEGVLLHRGFPIEQLAEHGDFLEVCYLLLYGELPTKAQKADFDYRVTHHTMVHEQMS 119 Query: 173 FFFRGFRRDAHPMAVLTGSVGALSAFYHDSLDISNANHREVSAIRMIAKLPTLVAMAYKY 232 FF GFRRDAHPMAV+ G VGALSAFYHDS DI++ + R V+++RMIAK+PT+ AMAYKY Sbjct: 120 RFFTGFRRDAHPMAVMCGCVGALSAFYHDSTDITDPHQRMVASLRMIAKMPTIAAMAYKY 179 Query: 233 SIGQPFVYPRNDLSYTANFMRMMFANPCEEYQVNEVLVRALDRILILHADHEQNASTSTV 292 IGQPFVYP+NDL Y +NF+RM FA PCEEY VN VL RA+DRI ILHADHEQNASTSTV Sbjct: 180 HIGQPFVYPKNDLDYASNFLRMCFAVPCEEYVVNPVLARAMDRIFILHADHEQNASTSTV 239 Query: 293 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLEQIGSVDKIPEFIKQVKDKNSGV 352 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG+VD+IPE+I + KDKN Sbjct: 240 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLAEIGTVDRIPEYITKAKDKNDPF 299 Query: 353 KLMGFGHRVYKNYDPRAKLMRETCYEVLNELGLHDDPLFKLAMELEKIALEDEYFVSRKL 412 +LMGFGHRVYKNYDPRAK+M++T +EVL ELG DDPL ++AMELE+IAL DEYF+ +KL Sbjct: 300 RLMGFGHRVYKNYDPRAKIMQKTTHEVLAELGHKDDPLLEVAMELERIALTDEYFIEKKL 359 Query: 413 YPNVDFYSGIVQRALGIPTSMFTCIFAMARTIGWIAQWNEMISDPEQKIGRPRQLFVGSP 472 YPN+DFYSGI +ALG PT+MFT +FA+ART+GWIAQWNEMI DPEQ+IGRPRQL+VG+P Sbjct: 360 YPNIDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPEQRIGRPRQLYVGAP 419 Query: 473 RRDPPP 478 RD P Sbjct: 420 LRDYVP 425 >BMEI0836 [C] COG0372 Citrate synthase Bme Brucella melitensis Length = 437 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/433 (69%), Positives = 356/433 (82%), Gaps = 4/433 (0%) Query: 46 KGKAMSNTDIKATLSFSDGSPSVDFPVYKGSIGPDVIDIRKLYGATGKFTYDPGFMSTAS 105 KGK MS+ T SF+ + D PV KG++GPDV+DI LY + FTYDPGF STAS Sbjct: 4 KGKTMSDK----TASFTLDGKTFDLPVRKGTVGPDVVDIGPLYKNSHAFTYDPGFTSTAS 59 Query: 106 CNSSITYIDGDKGELLYRGYPIEQLAVNCDFLESCYLLLHGELPNAEQKKVFVNTVTQHT 165 C S ITYIDGD+G LLYRGYPI+QLA + DFLE+CYLLL+GELP A QK F VT+HT Sbjct: 60 CESKITYIDGDEGVLLYRGYPIDQLAEHGDFLETCYLLLYGELPTATQKADFDYRVTRHT 119 Query: 166 MVHEQMNFFFRGFRRDAHPMAVLTGSVGALSAFYHDSLDISNANHREVSAIRMIAKLPTL 225 M+HEQM FF GFRRDAHPMAV+ G +GA+SAFYHDS DI++ + R V++IR+IAK+PTL Sbjct: 120 MLHEQMTKFFTGFRRDAHPMAVMVGCLGAMSAFYHDSTDITDPHQRMVASIRLIAKVPTL 179 Query: 226 VAMAYKYSIGQPFVYPRNDLSYTANFMRMMFANPCEEYQVNEVLVRALDRILILHADHEQ 285 AMAYKY IGQPFVYP+NDL + +NF+ M F PCEEY+VN VL RA+DRI ILHADHEQ Sbjct: 180 AAMAYKYHIGQPFVYPKNDLDFASNFLHMCFTVPCEEYKVNPVLARAMDRIFILHADHEQ 239 Query: 286 NASTSTVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLEQIGSVDKIPEFIKQV 345 NASTSTVRLAGSSGANPFACIAAG+ACLWGPAHGGANEAALNML +IGSVD+IPE+I + Sbjct: 240 NASTSTVRLAGSSGANPFACIAAGVACLWGPAHGGANEAALNMLSEIGSVDRIPEYIARA 299 Query: 346 KDKNSGVKLMGFGHRVYKNYDPRAKLMRETCYEVLNELGLHDDPLFKLAMELEKIALEDE 405 KDKN +LMGFGHRVYKNYDPRAK+M++TC+EVL ELG+ DDPL +AMELE+IAL DE Sbjct: 300 KDKNDPFRLMGFGHRVYKNYDPRAKIMQKTCHEVLGELGIKDDPLLDVAMELERIALTDE 359 Query: 406 YFVSRKLYPNVDFYSGIVQRALGIPTSMFTCIFAMARTIGWIAQWNEMISDPEQKIGRPR 465 YF+ +KLYPN+DFYSGI +ALG PT MFT +FA+ART+GW+AQW EMI DP+QKIGRPR Sbjct: 360 YFIEKKLYPNIDFYSGITLKALGFPTEMFTVLFALARTVGWVAQWKEMIEDPQQKIGRPR 419 Query: 466 QLFVGSPRRDPPP 478 QL+ G+ RD P Sbjct: 420 QLYTGATERDYVP 432 >AGc2572 [C] COG0372 Citrate synthase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 429 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 300/426 (70%), Positives = 355/426 (83%), Gaps = 2/426 (0%) Query: 53 TDIKATLSFSDGSPSVDFPVYKGSIGPDVIDIRKLYGATGKFTYDPGFMSTASCNSSITY 112 T+ AT++ G V+ PV +G+IGP V+DI LY TG FTYDPGF STASC S ITY Sbjct: 2 TEKSATVTL--GEKQVELPVREGTIGPSVVDIATLYKHTGSFTYDPGFTSTASCESKITY 59 Query: 113 IDGDKGELLYRGYPIEQLAVNCDFLESCYLLLHGELPNAEQKKVFVNTVTQHTMVHEQMN 172 IDGD+G LL+RG+PIEQLA DFLE+CYLLL+GELP A QKK F VT+HTMVHEQM+ Sbjct: 60 IDGDEGVLLHRGFPIEQLAEQGDFLETCYLLLYGELPTAAQKKDFDTRVTRHTMVHEQMS 119 Query: 173 FFFRGFRRDAHPMAVLTGSVGALSAFYHDSLDISNANHREVSAIRMIAKLPTLVAMAYKY 232 FF G+RRDAHPMAV+ G+VGALSAFYHDS DI++ + R V+++RMIAK+PT+ AMAYKY Sbjct: 120 RFFTGYRRDAHPMAVMCGTVGALSAFYHDSTDITDPHQRMVASLRMIAKMPTIAAMAYKY 179 Query: 233 SIGQPFVYPRNDLSYTANFMRMMFANPCEEYQVNEVLVRALDRILILHADHEQNASTSTV 292 IGQPFVYP+NDL Y +NF+ M FA PCE+Y+V+ VL RA+DRI ILHADHEQNASTSTV Sbjct: 180 HIGQPFVYPKNDLDYASNFLHMCFAVPCEDYKVDPVLARAMDRIFILHADHEQNASTSTV 239 Query: 293 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLEQIGSVDKIPEFIKQVKDKNSGV 352 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IGSVD+IPE+I + KDKN Sbjct: 240 RLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLNEIGSVDRIPEYIARAKDKNDPF 299 Query: 353 KLMGFGHRVYKNYDPRAKLMRETCYEVLNELGLHDDPLFKLAMELEKIALEDEYFVSRKL 412 +LMGFGHRVYKNYDPRAK+M++T YEVL G DDP+ ++A+ELEKIAL D YFV +KL Sbjct: 300 RLMGFGHRVYKNYDPRAKIMQKTMYEVLEATGNSDDPIMQVALELEKIALSDPYFVEKKL 359 Query: 413 YPNVDFYSGIVQRALGIPTSMFTCIFAMARTIGWIAQWNEMISDPEQKIGRPRQLFVGSP 472 YPNVDFYSGI +ALG PT+MFT +FA+ART+GWIAQWNEMI DP+Q+IGRPRQL+ G+ Sbjct: 360 YPNVDFYSGITLKALGFPTTMFTVLFALARTVGWIAQWNEMIEDPQQRIGRPRQLYTGAG 419 Query: 473 RRDPPP 478 +RD P Sbjct: 420 KRDYVP 425 >mlr0629 [C] COG0372 Citrate synthase Mlo Mesorhizobium loti Length = 433 Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/428 (70%), Positives = 349/428 (81%), Gaps = 2/428 (0%) Query: 51 SNTDIKATLSFSDGSPSVDFPVYKGSIGPDVIDIRKLYGATGKFTYDPGFMSTASCNSSI 110 +N + ATL F+ + +F V GS+GPDVIDI LY TG FTYDPGF STASC S I Sbjct: 4 ANQEATATLQFA--GKTHEFKVRSGSVGPDVIDIASLYSTTGAFTYDPGFTSTASCESEI 61 Query: 111 TYIDGDKGELLYRGYPIEQLAVNCDFLESCYLLLHGELPNAEQKKVFVNTVTQHTMVHEQ 170 T+IDGD G LL+RGYPI+QLA + DFLE CYLLL+GELP QK F VT+HTMVHEQ Sbjct: 62 TFIDGDAGILLHRGYPIDQLAEHGDFLEVCYLLLYGELPTKAQKDDFDYRVTRHTMVHEQ 121 Query: 171 MNFFFRGFRRDAHPMAVLTGSVGALSAFYHDSLDISNANHREVSAIRMIAKLPTLVAMAY 230 M+ FF GFRRDAHPMAV+ G VGALSAFYHDS DIS+ R V+++R+IAK+PT+ AMAY Sbjct: 122 MSRFFTGFRRDAHPMAVMCGVVGALSAFYHDSTDISDPYQRMVASMRLIAKMPTIAAMAY 181 Query: 231 KYSIGQPFVYPRNDLSYTANFMRMMFANPCEEYQVNEVLVRALDRILILHADHEQNASTS 290 KY IGQPF+YP+NDL + ANF+ M FA PCEEY++N VL RA++RI ILHADHEQNASTS Sbjct: 182 KYHIGQPFIYPKNDLGFAANFLHMCFAVPCEEYKINPVLARAMERIFILHADHEQNASTS 241 Query: 291 TVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLEQIGSVDKIPEFIKQVKDKNS 350 TVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNML +IG VD IPEFI + KDKN Sbjct: 242 TVRLAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLGEIGHVDHIPEFIARAKDKND 301 Query: 351 GVKLMGFGHRVYKNYDPRAKLMRETCYEVLNELGLHDDPLFKLAMELEKIALEDEYFVSR 410 +LMGFGHRVYKNYDPRAK+M++T +EVL ELG+ DDPL +AMELEKIAL D YF+ + Sbjct: 302 PFRLMGFGHRVYKNYDPRAKIMQKTAHEVLGELGIKDDPLLDIAMELEKIALTDPYFIEK 361 Query: 411 KLYPNVDFYSGIVQRALGIPTSMFTCIFAMARTIGWIAQWNEMISDPEQKIGRPRQLFVG 470 KLYPNVDFYSGI +ALG PT+MFT +FA+ART+GWIAQW EMI DP QKIGRPRQL+ G Sbjct: 362 KLYPNVDFYSGITLKALGFPTTMFTVLFAVARTVGWIAQWKEMIEDPRQKIGRPRQLYTG 421 Query: 471 SPRRDPPP 478 +P RD P Sbjct: 422 APERDYVP 429