BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0035.p         (125 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NMB0956 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase comple...   106   1e-23
NMA1150 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase comple...   105   3e-23
RSc1270 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase comple...    95   4e-20
XF1549 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex...    93   2e-19
HI1661 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex...    90   2e-18

>NMB0956 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex,
          dihydrolipoamide acyltransferase (E2) component, and
          related enzymes Nme Neisseria meningitidis MC58
          Length = 393

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/76 (69%), Positives = 64/76 (84%)

Query: 4  IEVKVPQLSESVAEATLLQWHKKVGEPVSRDENLIDIETDKVVLELPSPDAGVITQIIKA 63
          I+VKVP LSESV+E TLL+W KKVGE V+RDE LIDIETDKVVLE+PSP AGV+ +I+  
Sbjct: 3  IDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKVVLEVPSPQAGVLVEIVAQ 62

Query: 64 DGATVVAGEVIAILDT 79
          DG TVVA +V+A +DT
Sbjct: 63 DGETVVADQVLARVDT 78


>NMA1150 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex,
          dihydrolipoamide acyltransferase (E2) component, and
          related enzymes NmA Neisseria meningitidis Z2491
          Length = 403

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/75 (69%), Positives = 63/75 (84%)

Query: 4  IEVKVPQLSESVAEATLLQWHKKVGEPVSRDENLIDIETDKVVLELPSPDAGVITQIIKA 63
          I+VKVP LSESV+E TLL+W KKVGE V+RDE LIDIETDKVVLE+PSP AGV+ +I+  
Sbjct: 3  IDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKVVLEVPSPQAGVLVEIVAQ 62

Query: 64 DGATVVAGEVIAILD 78
          DG TVVA +V+A +D
Sbjct: 63 DGETVVADQVLARID 77


>RSc1270 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex,
          dihydrolipoamide acyltransferase (E2) component, and
          related enzymes Rso Ralstonia solanacearum
          Length = 418

 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/81 (56%), Positives = 64/81 (79%)

Query: 1  MAQIEVKVPQLSESVAEATLLQWHKKVGEPVSRDENLIDIETDKVVLELPSPDAGVITQI 60
          MA ++VKVPQ SESV E TL+ W KK GE V+ DE L++IETDKVVLE+P+P AGV+ ++
Sbjct: 1  MAIVDVKVPQFSESVEEGTLISWKKKPGEAVTVDEVLVEIETDKVVLEVPAPSAGVLAEV 60

Query: 61 IKADGATVVAGEVIAILDTDA 81
          + ADGATV + +++A +DT+ 
Sbjct: 61 LVADGATVTSEQLLAKIDTEG 81


>XF1549 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex,
           dihydrolipoamide acyltransferase (E2) component, and
           related enzymes Xfa Xylella fastidiosa 9a5c
          Length = 391

 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 4/122 (3%)

Query: 4   IEVKVPQLSESVAEATLLQWHKKVGEPVSRDENLIDIETDKVVLELPSPDAGVITQIIKA 63
           IEVKVP L ESV++AT+  WHKK GE V RDEN++D+ETDKVVLE+PSP  GV+ +I   
Sbjct: 3   IEVKVPVLPESVSDATIASWHKKAGEIVKRDENIVDLETDKVVLEVPSPVDGVLKEIKFD 62

Query: 64  DGATVVAGEVIAILDTDASAQVAPTEVKAAPAPQAXCRPPPSCWPTTTCRPRKSPAPARM 123
            G+TV + +V+AI++ + S   AP+    AP+P    +P     P         P  AR 
Sbjct: 63  TGSTVTSNQVLAIIE-EGSIVAAPS---PAPSPVIDQKPVAVSAPAAKSSVDSLPPGARF 118

Query: 124 AA 125
            A
Sbjct: 119 TA 120


>HI1661 [C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex,
           dihydrolipoamide acyltransferase (E2) component, and
           related enzymes Hin Haemophilus influenzae
          Length = 409

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 74/122 (60%)

Query: 4   IEVKVPQLSESVAEATLLQWHKKVGEPVSRDENLIDIETDKVVLELPSPDAGVITQIIKA 63
           IE+ VP L ESVA+AT+  WHKK+G+ V RDE +++IETDKVVLE+P+   GV+ ++++A
Sbjct: 3   IEILVPDLPESVADATVATWHKKLGDTVKRDEVIVEIETDKVVLEVPALSDGVLAEVVQA 62

Query: 64  DGATVVAGEVIAILDTDASAQVAPTEVKAAPAPQAXCRPPPSCWPTTTCRPRKSPAPARM 123
           +G TVV+ +++  + T     V+   +KA   P    R   +   +      +SP   R+
Sbjct: 63  EGETVVSKQLLGKISTAQEGDVSSATLKATNEPTPSDRQNAAIENSHNHNADQSPVIRRL 122

Query: 124 AA 125
            A
Sbjct: 123 LA 124