BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0021.p (229 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1210 [R] COG0670 Integral membrane protein, interacts with Ft... 338 8e-93 yccA [R] COG0670 Integral membrane protein, interacts with FtsH ... 139 5e-33 ZyccA [R] COG0670 Integral membrane protein, interacts with FtsH... 137 2e-32 ECs1054 [R] COG0670 Integral membrane protein, interacts with Ft... 137 2e-32 VC1358 [R] COG0670 Integral membrane protein, interacts with Fts... 136 4e-32 >RSc1210 [R] COG0670 Integral membrane protein, interacts with FtsH Rso Ralstonia solanacearum Length = 233 Score = 338 bits (866), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 173/231 (74%), Positives = 202/231 (87%), Gaps = 3/231 (1%) Query: 2 NNLDTT-FGHSTTS--LATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMIS 58 N L+T FG S T+ LA RNRVLRNTYWLLALSMIPT+LGAW+GV F+L AG P++ Sbjct: 3 NQLNTYGFGASGTAGALAVRNRVLRNTYWLLALSMIPTILGAWIGVATGFNLMAGRPLMG 62 Query: 59 FVLFLAIAFGFFYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAF 118 F++F+ +AFGFFYAIE+ KNSG+GVA LLGFTFFMGLMLSRLI LGFSNGA LIMTAF Sbjct: 63 FLIFMGVAFGFFYAIERFKNSGMGVALLLGFTFFMGLMLSRLIGMILGFSNGAALIMTAF 122 Query: 119 GGTAIIFCGMATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIA 178 GGTA IF MAT+ATVSKRDFSGLGKWLF GVLV++V ++ANI+LQLP++ LTISV+AIA Sbjct: 123 GGTATIFAVMATVATVSKRDFSGLGKWLFMGVLVLIVGSVANIWLQLPSMMLTISVLAIA 182 Query: 179 IFSAYILFDVQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 IFSAYIL+DVQ++VNGGETNY++ATLAIYLDVYNVF NLL+ILGI GGNR+ Sbjct: 183 IFSAYILYDVQRIVNGGETNYVTATLAIYLDVYNVFTNLLAILGIFGGNRN 233 >yccA [R] COG0670 Integral membrane protein, interacts with FtsH Eco Escherichia coli K12 Length = 219 Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 133/222 (59%), Gaps = 13/222 (5%) Query: 10 HSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFVLFLAIAFGF 69 H TSL + ++VLRNTY+LL+L++ + + A L P +L L +G Sbjct: 9 HDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML------PSPGLILTLVGMYGL 62 Query: 70 FYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAG-LIMTAFGGTAIIF-CG 127 + KT N G+ FT F+G +L ++ L S G G +I A GGTA++F C Sbjct: 63 MFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYL--SAGMGDVIAMALGGTALVFFCC 120 Query: 128 MATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIFSAYILFD 187 A + T +++D S LG L AG++V+L+ +ANIFLQLPAL L IS V I I S ILF+ Sbjct: 121 SAYVLT-TRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFE 179 Query: 188 VQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 +++GGETNYI AT+++Y+ +YN+F +LLSILG +RD Sbjct: 180 TSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGF--ASRD 219 >ZyccA [R] COG0670 Integral membrane protein, interacts with FtsH EcZ Escherichia coli O157:H7 EDL933 Length = 219 Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 132/222 (59%), Gaps = 13/222 (5%) Query: 10 HSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFVLFLAIAFGF 69 H TSL + ++VLRNTY+LL+L++ + + A L P +L L +G Sbjct: 9 HDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML------PSPGLILTLVGMYGL 62 Query: 70 FYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAG-LIMTAFGGTAIIF-CG 127 + K N G+ FT F+G +L ++ L S G G +I A GGTA++F C Sbjct: 63 MFLTYKMANKPTGIISAFAFTGFLGYILGPILNTYL--SAGMGDVIAMALGGTALVFFCC 120 Query: 128 MATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIFSAYILFD 187 A + T +++D S LG L AG++V+L+ +ANIFLQLPAL L IS V I I S ILF+ Sbjct: 121 SAYVLT-TRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFE 179 Query: 188 VQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 +++GGETNYI AT+++Y+ +YN+F +LLSILG +RD Sbjct: 180 TSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGF--ASRD 219 >ECs1054 [R] COG0670 Integral membrane protein, interacts with FtsH Ecs Escherichia coli O157:H7 Length = 219 Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/222 (40%), Positives = 132/222 (59%), Gaps = 13/222 (5%) Query: 10 HSTTSLATRNRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFVLFLAIAFGF 69 H TSL + ++VLRNTY+LL+L++ + + A L P +L L +G Sbjct: 9 HDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML------PSPGLILTLVGMYGL 62 Query: 70 FYAIEKTKNSGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAG-LIMTAFGGTAIIF-CG 127 + K N G+ FT F+G +L ++ L S G G +I A GGTA++F C Sbjct: 63 MFLTYKMANKPTGIISAFAFTGFLGYILGPILNTYL--SAGMGDVIAMALGGTALVFFCC 120 Query: 128 MATIATVSKRDFSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIFSAYILFD 187 A + T +++D S LG L AG++V+L+ +ANIFLQLPAL L IS V I I S ILF+ Sbjct: 121 SAYVLT-TRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPALHLAISAVFILISSGAILFE 179 Query: 188 VQQVVNGGETNYISATLAIYLDVYNVFANLLSILGIVGGNRD 229 +++GGETNYI AT+++Y+ +YN+F +LLSILG +RD Sbjct: 180 TSNIIHGGETNYIRATVSLYVSLYNIFVSLLSILGF--ASRD 219 >VC1358 [R] COG0670 Integral membrane protein, interacts with FtsH Vch Vibrio cholerae Length = 223 Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 130/209 (62%), Gaps = 5/209 (2%) Query: 19 NRVLRNTYWLLALSMIPTVLGAWLGVQLHFSLFAGSPMISFVLFLAIAFGFFYAIEKTKN 78 N+VL+NTY+LL+++++ + + A + + S P+++ V+ LA F+ + K N Sbjct: 19 NKVLKNTYFLLSMTLVTSAIAAMATMAIGIS-----PIVALVMQLAAIGILFFVMPKAIN 73 Query: 79 SGLGVAFLLGFTFFMGLMLSRLIEFTLGFSNGAGLIMTAFGGTAIIFCGMATIATVSKRD 138 S G+ + FT MG L ++ F NG +I A G T ++F G++ SK+D Sbjct: 74 SSSGLVWTFVFTGLMGGALGPMLNFYAAMPNGPIVIAQALGLTGMVFLGLSAYTITSKKD 133 Query: 139 FSGLGKWLFAGVLVILVAALANIFLQLPALQLTISVVAIAIFSAYILFDVQQVVNGGETN 198 FS + +LFAG+++++VAAL NIF+ L IS V+ +FS +ILFD ++V G ETN Sbjct: 134 FSFMRNFLFAGLIIVIVAALINIFVGSTVAHLAISSVSALVFSGFILFDTSRIVRGEETN 193 Query: 199 YISATLAIYLDVYNVFANLLSILGIVGGN 227 YISAT+++YL++ N+F +LLSILGI+ N Sbjct: 194 YISATISMYLNILNLFTSLLSILGIMNNN 222