BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0145.p         (258 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YPO0080 [P] COG0725 ABC-type molybdate transport system, peripla...   116   4e-26

>YPO0080 [P] COG0725 ABC-type molybdate transport system, periplasmic
           component Ype Yersinia pestis
          Length = 272

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 102/154 (66%), Gaps = 6/154 (3%)

Query: 76  RLQRGEHIDVVIMVGDSLDKLVAAGKVSKTEHKLLALSRIGLAVKAGAPRPDISNLDAFK 135
           R++ GE  DVVI+  +++DKL+ +GK+       L  S + +AVK GA   D+S+ +  K
Sbjct: 88  RVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVK 147

Query: 136 RTLLTAHSVVYSDSASGVFLSTKLFKRLGIDQQMAYKGRMI---PAEPVGQVVARGDAEI 192
           + +L A+++ YS   SGV+L T++F+  GI +Q+  K R++   P  PVG +VA+G+ E+
Sbjct: 148 QAVLAANTIAYSTGPSGVYL-TEVFEHWGIAEQI--KDRIVKVPPGVPVGSLVAKGEVEL 204

Query: 193 GLQQISELKPVKGIDIIGPIPEEAQQLTPFSAGV 226
           G QQ+SEL  +KGI I+GP+P + Q +T FSAGV
Sbjct: 205 GFQQLSELLHLKGIIILGPLPTDIQIMTHFSAGV 238