BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0118.p (266 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ZyecA [R] COG3318 Predicted metal-binding protein related to the... 114 2e-25 ECs2616 [R] COG3318 Predicted metal-binding protein related to t... 114 2e-25 yecA [R] COG3318 Predicted metal-binding protein related to the ... 112 8e-25 STM1938 [R] COG3318 Predicted metal-binding protein related to t... 105 1e-22 NMB1071 [R] COG3318 Predicted metal-binding protein related to t... 81 2e-15 >ZyecA [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA EcZ Escherichia coli O157:H7 EDL933 Length = 221 Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%) Query: 6 PLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGSRPEDT 65 PL+++E + LDD L ++ + L G LTA+ PQE+ A+WL VWG + Sbjct: 5 PLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPAQWLVAVWGGA-DYV 63 Query: 66 PKFKNGKEAERITSLIARSMNEIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWAWGFWE 125 P++ + KE R +L + M + A P+++EPLF RE +G L E W +G+ Sbjct: 64 PRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMR 123 Query: 126 GIQLRAEQWDEIFHSNLAPLMRPIYLLGSDELEEEETKLIDDPIKTHKLAIEIEAAIPHI 185 G+ L W + S L P + I L G++E E K+ + + AI + A + Sbjct: 124 GVALS--DWSTLPDS-LKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAAL--DL 178 Query: 186 HRYW-APKRKSAVEQVQRDAPKTGRNDPCPCGSGKKY 221 H YW A ++ AV+Q + K GRNDPCPCGSGKK+ Sbjct: 179 HAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKF 215 >ECs2616 [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA Ecs Escherichia coli O157:H7 Length = 221 Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 114/217 (52%), Gaps = 7/217 (3%) Query: 6 PLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGSRPEDT 65 PL+++E + LDD L ++ + L G LTA+ PQE+ A+WL VWG + Sbjct: 5 PLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPAQWLVAVWGGA-DYV 63 Query: 66 PKFKNGKEAERITSLIARSMNEIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWAWGFWE 125 P++ + KE R +L + M + A P+++EPLF RE +G L E W +G+ Sbjct: 64 PRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMR 123 Query: 126 GIQLRAEQWDEIFHSNLAPLMRPIYLLGSDELEEEETKLIDDPIKTHKLAIEIEAAIPHI 185 G+ L W + S L P + I L G++E E K+ + + AI + A + Sbjct: 124 GVALS--DWSTLPDS-LKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAAL--DL 178 Query: 186 HRYW-APKRKSAVEQVQRDAPKTGRNDPCPCGSGKKY 221 H YW A ++ AV+Q + K GRNDPCPCGSGKK+ Sbjct: 179 HAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKF 215 >yecA [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA Eco Escherichia coli K12 Length = 221 Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 75/217 (34%), Positives = 113/217 (52%), Gaps = 7/217 (3%) Query: 6 PLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGSRPEDT 65 PL+++E + LDD L ++ + L G LTA+ PQE+ +WL VWG + Sbjct: 5 PLNESELEWLDDILTKYNTDHAILDVAELDGLLTAVLSSPQEIEPEQWLVAVWGGA-DYV 63 Query: 66 PKFKNGKEAERITSLIARSMNEIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWAWGFWE 125 P++ + KE R +L + M + A P+++EPLF RE +G L E W +G+ Sbjct: 64 PRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFGLREVDGSELTIVEEWCFGYMR 123 Query: 126 GIQLRAEQWDEIFHSNLAPLMRPIYLLGSDELEEEETKLIDDPIKTHKLAIEIEAAIPHI 185 G+ L W + S L P + I L G++E E K+ + + AI + A + Sbjct: 124 GVALS--DWSTLPDS-LKPALEAIALHGTEENFERVEKMSPEAFEESVDAIRLAAL--DL 178 Query: 186 HRYW-APKRKSAVEQVQRDAPKTGRNDPCPCGSGKKY 221 H YW A ++ AV+Q + K GRNDPCPCGSGKK+ Sbjct: 179 HAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKF 215 >STM1938 [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA Sty Salmonella typhimurium LT2 Length = 221 Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 108/220 (49%), Gaps = 11/220 (5%) Query: 5 QPLSDAEFDELDDFLLSDRCADDVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGSRPED 64 +PL++ E + LDD L ++ + L G +TA+ P+ + +WL +WG P Sbjct: 4 EPLNENELEWLDDVLTKYNTDQAILDVAELDGLITAVLSSPRPIDPEQWLVAIWGG-PAY 62 Query: 65 TPKFKNGKEAERITSLIARSMNEIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWAWGFW 124 P++ + KE R L+ + M + A E P+++EPLF RE +G L E W +G+ Sbjct: 63 VPRWTSEKEMTRFMDLVFQHMADTAARLEDYPEQFEPLFGLREVDGHELTIVEEWCFGYM 122 Query: 125 EGIQLRAEQWDEIFHSNLAPLMRPIYLLGSDELEEEETKLID--DPIKTHKLAIEIEAAI 182 G+ L W ++ L P + I L G+ EE L+D P K I A Sbjct: 123 RGVSLS--DWSDL-PDTLKPALEAIALHGT----EENFALLDKMSPEAFDKSVDAIRIAA 175 Query: 183 PHIHRYW-APKRKSAVEQVQRDAPKTGRNDPCPCGSGKKY 221 +H +W A + ++ + K GRNDPCPCGSGKK+ Sbjct: 176 LELHAWWMAHPHTTPLQMPIKAEVKVGRNDPCPCGSGKKF 215 >NMB1071 [R] COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA Nme Neisseria meningitidis MC58 Length = 220 Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 25/204 (12%) Query: 27 DVMTMDTLHGYLTALAIGPQEVLMAEWLPRVWGSRPEDTPKFKNGKEAERITSLIARSMN 86 + M D + G++TAL GP ++ +WLP V G D +F + +E ++A +M Sbjct: 26 NTMRCDEVQGFMTALLSGPDKLTPLDWLPEVLG----DESQFTAAERSEIERLVLAMAME 81 Query: 87 EIAITFEVAPKEYEPLFCEREHEGKPLLDAEAWAWGFWEGIQLRAEQW-----DEIFHSN 141 A ++ K+ L+ +G D W + G+ + W DE F Sbjct: 82 TTAA---MSDKKLPDLWLYENEDGGS--DFYTWCNAYLYGLDIVPTDWFEAVDDEAFEE- 135 Query: 142 LAPLMRPIYLLGSDELEEEETKLIDDPIKTHKLAIEIEAAIPH----IHRYWAPKRKSAV 197 L PI LG +EEE I +LA E+E+ +P+ I+RYW Sbjct: 136 ---LFYPIMALGGI-YDEEENGAIRLQFTEGELA-ELESELPYALADIYRYWQAVINKP- 189 Query: 198 EQVQRDAPKTGRNDPCPCGSGKKY 221 + V+R+ KTGRNDPCPCGSG+KY Sbjct: 190 QTVRREGEKTGRNDPCPCGSGRKY 213