BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0103.p (1460 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2657 Non COG 607 e-173 STM3369 [S] COG3164 Predicted membrane protein Sty Salmonella ty... 207 2e-52 VC0420 [S] COG3164 Predicted membrane protein Vch Vibrio cholerae 204 1e-51 YPO3670 [S] COG3164 Predicted membrane protein Ype Yersinia pestis 197 2e-49 XF1126 [S] COG3164 Predicted membrane protein Xfa Xylella fastid... 192 5e-48 >RSc2657 Non COG Length = 1426 Score = 607 bits (1565), Expect = e-173, Method: Compositional matrix adjust. Identities = 434/1374 (31%), Positives = 654/1374 (47%), Gaps = 92/1374 (6%) Query: 55 FLVLRYAVLPEIGHYKPQIERLVSAQIGRAVSIDVINASWRGLRPQLSLTNITVHDQQGE 114 L++R+ + P +G + +ER S + V I + W G P I D G Sbjct: 81 ILLVRFVLWPRVGLAREWMERQASVTLQAKVGIGALETYWEGWHPAFRAQRIEALDAAGR 140 Query: 115 PALTLPQVSTTLSWSSVVVASLRLENLSIEGADLAIRRDAGGKLFVAGIPV--PTGGDGS 172 + V LSW S+ + L AD+ +RRDA G L VAGI V G DG+ Sbjct: 141 RTFAVQDVQARLSWRSLPRLQITFAVLHASQADVLVRRDATGALSVAGIKVEPSAGSDGT 200 Query: 173 SLDWLLSQREIVIRHSKLRWDDELRQAPELVLEDVNLVLHNRWLRHRLSLRAIPPASYAA 232 D LLSQ +I R +RW D+ PE L +V L L N RHRL A + Sbjct: 201 FFDQLLSQGDIDFRDGAVRWLDQQHGLPEAALGNVRLHLRNGPTRHRLDASATSATLFNG 260 Query: 233 PLDVRADFSHPAFARSSDILRWKGTLYADLQRTDLSVWRAYFDYPIAIQSGTGSVRAWLA 292 P+ +RADF H AR D W G + L+ + Y + GT + + Sbjct: 261 PIKLRADFRHDLLARPGDWRHWHGQANWQVDALRLATLQRYLPVLASATGGTLTSDGSVE 320 Query: 293 LDHAKVANFTADLALNNFNAQLSRQLEPLSLKRVNGRISASESLGATPEDGIPTFGANGH 352 + A L + QL + L+P+ L+ + ++ S A+ E + Sbjct: 321 FSGGTLTRGQARLTGQQIDLQLRQDLDPIRLRSL--QVLGSHQRSASGEHTL-----RLE 373 Query: 353 QVTLTDFSIETPDGFVLP---------PTSIAESYEPGTP---------------LKAER 388 + S +P LP PT A + GTP R Sbjct: 374 TLQWLPLSPASPQAVPLPAPAQATLAGPTLEAPANPAGTPRGLRNVTVGWAVDAHAALRR 433 Query: 389 TSVKATYLNLQTLSQLATRLPLAPSQRKLLDDLAPRGELRDFTVQWQ---------GTYP 439 VKA L+L + +AT LPL L P G L D + WQ P Sbjct: 434 LQVKAATLDLADVRAIATALPLPADVLDPLRSKQPTGRLDDLDINWQRDVSRWRPNSPAP 493 Query: 440 ELASYRVQGRFSGLGLKGLPA-----HVEPRRNAAQQVRAQWAGFPGFSNIDGEIDATEK 494 E S R G LPA H EP PG N+ G + ++ Sbjct: 494 EHYSGHGTLRQVSFGPGPLPAVPPGHHPEP-------------AVPGVENLSGNVVFSDD 540 Query: 495 GGSVKLDSQDLAIEMPAEQFVESSMPFDSLKMQARWQYLKDQTLQVDLEQLQFAQPGVAG 554 G++++DS D+A+ +P F ES +P D L+ W + Q L V + L F+ ++ Sbjct: 541 KGTLRIDSADVALLLPGV-FDESRVPLDRLQGTFTWTR-RQQELVVSSDNLTFSNADLSA 598 Query: 555 SLSGRHVQPLQGKSAGSVDLHGELSRFDVKAIRRYLPRHLSEPLRHWLTDGLVDGSLRDV 614 ++G + G+VDL G L + V + RYLP L + LR +L+ L G+ +V Sbjct: 599 RITGSYRHAPDTSHIGAVDLKGTLDQAMVPRVPRYLPLSLPQHLRDYLSGALQTGTASNV 658 Query: 615 QFTLKGALADFPFHTAKPGDKPKGQFQLSGDFEGLKLNYTPGHLGRD--GKEPE----WP 668 F L G L DFP+ KG F++ + + P GR+ G P WP Sbjct: 659 TFVLAGDLFDFPYRAPH-----KGSFRVEVPIKDVTYQAAPLEAGRNPPGSVPAHPGGWP 713 Query: 669 LLEEGRGHLSIDRTRLEIKADSARTLGAKLGPVTARVADVDSHEAELEIEGVASAPMAVF 728 G + D+ L K AR +G L VT + D+ S + L I+G A F Sbjct: 714 SFTGIEGTVVFDKPSLSFKVARARVMGVNLTDVTGSLPDMGSAQPLLVIDGHADGATQGF 773 Query: 729 LRYVNQSPVARWTGNLMEHSSATGEARLDLKFQMPLHHAIDTRAQGAFHFANNDVDLLPD 788 L+YV SPV W G+ + A G A L LK ++PLH TRAQG+ F +NDV L+P Sbjct: 774 LQYVEASPVGEWIGHFTRETRAQGNATLALKLELPLHEMHATRAQGSVGFLHNDVTLIPQ 833 Query: 789 LPVLYRTNGKVEFNEHGFTLNGVRGQFLGDALTISGGTQKDGSSQMRLEGAINVDMLRKQ 848 P L G + F + G + +R +F G + +GGT DG+ ++++ G + LR Sbjct: 834 APPLADVTGTLTFTQRGIGFDNLRARFAGGEIRPTGGTLPDGTIRIQVAGTASAQGLRDT 893 Query: 849 YPEPSLQRLLAR-LSGTTRYNATVLVRQHQPEVVVESSLAGLGVDLPVPLRKSAQESLPL 907 P S +AR L G+ Y+AT+ V+Q + V+V+S L + V LP PL K+A + LP+ Sbjct: 894 TPADSAVAAVARALDGSAPYSATISVKQRRATVLVQSDLTPMTVRLPAPLAKAAGQPLPV 953 Query: 908 RFELLPLASADPLIEREELKLALGSNIASRYVRERVAATGAAWRVTSGGIGWNQPAPSPS 967 RFE+ P A+ + + +E+ L LG+ + +RY +R +A+G V GGIG QP P P+ Sbjct: 954 RFEMRPAANGN-AADIDEVLLQLGNVVNARY-EQRSSASGT--EVLRGGIGVRQPVPQPA 1009 Query: 968 AGLKLALATDSLEVDPWLSLKNELVGPAVAEDASAASTRLGSGDIAQYLEPDQVSARVGE 1027 G+ A+A D L++D W + A + A A+ G+ YL P +++ R Sbjct: 1010 DGVLAAIALDRLDIDAWRQVFAAPAAAAADKSAGTAAASPARGN--PYL-PTRLAGRAQA 1066 Query: 1028 LSLKGKKLNKLILEAAHRRNSWQISLESQQVAGTVTWDESGAARGPGKVTARLSSLVIPK 1087 L + G+ N + ++A+ +WQ +++S+++AGT W A G++T RLS + IP Sbjct: 1067 LRILGRDFNAVSVDASRDGANWQSTIDSREIAGTARWHAESATVPFGELTMRLSRMSIPD 1126 Query: 1088 STPTAENGAATVASEDDKVQMPALDIRAEQFELGGKKLGRLELDASNMVTSVGREWRISR 1147 + E A T + + ++P+LD+ A+ F+L GK LGRLEL A + ++ W + Sbjct: 1127 AR---EESALTESLARNTQEIPSLDLVADSFDLRGKPLGRLELKARSQISDGAPVWTLET 1183 Query: 1148 LLLANPDAQFRAAGNWMS----FGSNHTSNFT---YALDIEDAGKLLERFGYPGTVRGGK 1200 L L P A A G W GS+ T + LD+ ++G+LL++ G+ + G + Sbjct: 1184 LKLDQPAATLTAQGTWRIPRRLRGSDDPERRTLLDFRLDLRNSGELLQKMGFAKVLDGAR 1243 Query: 1201 GKLDGDLSWKAPPYAMDMASLAGQVHMDVHAGQFLKVDPGAAKLLGVLNLQALPRRLTLD 1260 G L+G + W+ P ++D+ SL G++ +++ GQFL VDPG AKL GVL+LQ L D Sbjct: 1244 GTLEGRVVWRGSPMSLDLPSLNGRMALNLERGQFLPVDPGLAKLAGVLSLQGL-LHFATD 1302 Query: 1261 FRDVFSEGFAFDTVAGTASINKGIASTDNLKMTGVTASVLMSGSADIARETQDLHVVVIP 1320 R G F++VA T +I GIA TD+ + G V M GSA+I ETQDL V V P Sbjct: 1303 LRGATGRGTPFESVAATGTIASGIARTDDFAVKGPQFQVAMQGSANILEETQDLRVTVTP 1362 Query: 1321 EINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVSGSWSDPIVVK 1374 +++ +AS+ A +NP +G+ TL AQL L + + K+ + +Y+V+GSW+DP + K Sbjct: 1363 KVDATSASLAAAFINPAIGLGTLAAQLILGDQMSKAFATQYRVTGSWADPKIEK 1416 >STM3369 [S] COG3164 Predicted membrane protein Sty Salmonella typhimurium LT2 Length = 1266 Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 331/1417 (23%), Positives = 559/1417 (39%), Gaps = 221/1417 (15%) Query: 41 VKLLLAGYFIFCALFLV--LRYAVLPEIGHYKPQIERLVSAQIGRAVSIDVINASWRGLR 98 + LL I A LV LR A LP + ++P I + + G V+ ++ASW+ Sbjct: 7 ILLLTGAALIVIAALLVSGLRLA-LPHLDAWRPAILNKIESVTGVPVAASQLSASWQNFG 65 Query: 99 PQLSLTNITVHDQQGEPALTLPQVSTTLS-WSSVVVASLRLENLSIEGADLAIRRDAGGK 157 P L NI + G L++ +V+ L W S++ + +L+ + Sbjct: 66 PTLEAHNIHAALKDGG-ELSIKRVTLALDVWQSLLHMRWQFRDLTFWQLN---------- 114 Query: 158 LFVAGIPVPTGGDGSSL------DWLLSQRE-IVIRHSKLRWDDELRQAPELVLEDVNLV 210 F P+ + DG + D L Q + +R S++ + Q EL + + + Sbjct: 115 -FRTNTPLQSS-DGEGIETSRLSDLFLRQFDHFDLRDSQISFLTLSGQRAELAIPQLTWL 172 Query: 211 LHNRWLRHR----LSLRAIPPASYAAPLDVRADFSHPAFARSSDILRWKGTLYADLQRTD 266 N RHR +SL ++ + VR D R D L G ++ D Sbjct: 173 --NGKERHRAEGEVSLSSL--TGQHGVMQVRMDL------RDDDGLLNNGRVWLQADDID 222 Query: 267 LSVWRA-YFDYPIAIQSGTGSVRAWLALDHAKVA----------------NFTADLALNN 309 + W + +A+Q+ S+ W+ L ++A N T L+++N Sbjct: 223 VKPWLGKWMQDNVALQTARFSLEGWMTLSKGEIAGGDVWLKQGGASWLGDNTTHTLSVDN 282 Query: 310 FNAQLSRQLEPLSLKRVNGRISASESLGATPEDGIPTFGANGHQVTLTDFSIETPDGFVL 369 AQ+SR+ +P G Q + D I T DG Sbjct: 283 LTAQISRE-QP------------------------------GWQFYIPDTRI-TLDGKPW 310 Query: 370 PPTSIAESYEPGTPLKAERTS------VKATYLNLQTLSQLATRLPLAPSQRKLLDDLAP 423 P ++ ++ P + E + ++A+ L L L L PLA +L Sbjct: 311 PSGALTVAWLPQQDVGGENHTRSDELRIRASNLELAGLEALR---PLAAKLSPVL----- 362 Query: 424 RGELRDFTVQWQGTYPELASYRVQGRFSGLGLK-GLPAHVEPRRNAAQQVRA--QWAGFP 480 GE+ WQ T P G+ + L L L A + R A+ + A QW P Sbjct: 363 -GEI------WQATQPS-------GKIATLALDIPLQATEKTRFQASWENLAWKQWKLLP 408 Query: 481 GFSNIDGEIDATEKGGSVKLDSQDLAIEMPAEQFVESSMPFDSLKMQARWQYLKDQT-LQ 539 G + G + + + G +K+ Q +MP E + + ++ W LK++ Q Sbjct: 409 GAEHFSGTLAGSVEDGQMKVAMQQ--AKMPYETVFRAPLEIENGVATLSW--LKNENGFQ 464 Query: 540 VDLEQLQFAQPGVAGSLSGRHVQPLQGKSAGSVDLHGELSRFDVKAIRRYLPRHL-SEPL 598 +D + V R++QP + + + +S D RY P +L + L Sbjct: 465 LDGRDIDVKAKAVHARGGFRYLQPTGDEPW--LGILAGISTDDGSQAWRYFPENLMGKAL 522 Query: 599 RHWLTDGLVDGSLRDVQFTLKGALADFPFHTAKPGDKPKGQFQLSGDFEGLKLNYTPGHL 658 +L+ + G + G FP+ +GQF++ + Sbjct: 523 VDYLSGAIQGGEADNATLVYGGNPHLFPYK------HNEGQFEVLVPLRNATFAF----- 571 Query: 659 GRDGKEPEWPLLEEGRGHLSIDRTRLEIKADSARTLGAKLGPVTARVADVDSHEAELEIE 718 +P+WP L+ L L +++DS G K + A + D + +L I+ Sbjct: 572 -----QPDWPALKNLNIELDFLNDGLWMRSDSVDLGGVKASKLAAAIPDYS--KEKLLID 624 Query: 719 GVASAPMAVFLRYVNQSPVARWTGNLMEHSSATGEARLDLKFQMPLHHAIDTRAQGAFHF 778 + P Y +++P+ G+ + G+ L +PL T A+G Sbjct: 625 ADINGPGKAVGPYFDETPLKDSLGSTLAELQLDGDVNARLHLDIPLDGEQVT-AEGDVSL 683 Query: 779 ANNDVDLLPDLPVLYRTNGKVEFNEHGFTLNGVRGQFLGDALTISGGTQKDGSS-QMRLE 837 NN + + P L NGK F + + L + T + + Q+ + Sbjct: 684 RNNSLFIKPLNSTLKNLNGKFSFVNGALKSGPLTANWFNQPLNLDFSTTEGAKAYQVAVN 743 Query: 838 GAINVDMLRKQYPEPSLQRLLARLSGTTRYNATVLVR-----QHQPEVVVESSLAGLGVD 892 N R P L LSG+ +N V + + + L + Sbjct: 744 LNGNWQPTRMGVLPPQLND---ALSGSVTWNGKVGIDLPYHADTTYHIELNGDLRNVSSH 800 Query: 893 LPVPLRKSAQESLPLRFELLPLASADPLIEREELKLALGS--NIASRYV-RERVAATGAA 949 LP PL K A E++P+ + AD ++ L + GS + SR++ +++ A Sbjct: 801 LPSPLNKPAGEAIPVNIQ------ADGNLKSFALTGSAGSKNHFNSRWLLNQKLTLDRAI 854 Query: 950 WRVTSGGIGWNQPAPSPSAGLKLALATDSLEVDPWLSLKNELVGPAVAEDASAASTRLGS 1009 W S I P P+ G++L L +L+ WL+L + A++ S++ Sbjct: 855 WTTDSRTI---PPLPA-QQGVELNLP--ALDGAQWLALFQK----GAADNVSSS------ 898 Query: 1010 GDIAQYLEPDQVSARVGELSLKGKKLNKLILEAAHRRNSWQISLESQQVAGTVT------ 1063 A++ P +V+ R LSL G++ N L + +A N +I + ++V T+ Sbjct: 899 ---AEF--PQRVTLRTPALSLGGQQWNNLSVVSAPSLNGTKIEAQGREVNATLLMRNHAP 953 Query: 1064 W--DESGAARGPGKVTARLSSLVIPKSTPTAENGAATVASEDDKVQMPALDIRAEQFELG 1121 W + PG SS TPT+ +A S P L +R E+ L Sbjct: 954 WLANIKYLYYNPGVAKTHASS-----PTPTSPLASANTISFRG---WPDLQLRCEECWLW 1005 Query: 1122 GKKLGRLELDASNMVTSVGREWRISRLLLANPDAQFRAAGNWMSFGSNHTSNFTYALDIE 1181 G+K GR++ D G ++ L+ A+ +A G W++ N ++ +L Sbjct: 1006 GQKYGRIDGD----FAIKGNTLTLANGLIDTGFARLKANGEWVNAPGNERTSLKGSLHGS 1061 Query: 1182 DAGKLLERFGYPGTVRGGKGKLDGDLSWKAPPYAMDMASLAGQVHMDVHAGQFLKVDPG- 1240 + FG ++ +D DL W+ PP+ D A+L G + + G+F + G Sbjct: 1062 NLDTAAGFFGISTPIQNASFNVDYDLHWRNPPWQPDEATLNGILRTRLGKGEFTDLSSGH 1121 Query: 1241 AAKLLGVLNLQALPRRLTLDFRDVFSEGFAFDTVAGTASINKGIASTDNLKMTGVTASVL 1300 A +LL +L+ AL R+L DFRD FSEGF FD++ TA I G+ TD+ + G+ A + Sbjct: 1122 AGQLLRLLSFDALLRKLRFDFRDTFSEGFYFDSIHSTAWIKDGVLHTDDTLVDGLEADIA 1181 Query: 1301 MSGSADIARETQDLHVVVIPEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLS-F 1359 M GS D+ R D+ VV PEI+ A AVNP+VG + A L P+ +S Sbjct: 1182 MKGSVDLVRRRLDMEAVVAPEISATVGVAAAFAVNPIVGAAVFAASKVL-GPLWSKVSIL 1240 Query: 1360 EYKVSGSWSDPIVVKQGQVTPVDGQRARELLEQGRGQ 1396 Y+++G PVD + E+L Q R + Sbjct: 1241 RYRITG--------------PVDAPQINEVLRQPRKE 1263 >VC0420 [S] COG3164 Predicted membrane protein Vch Vibrio cholerae Length = 1291 Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 250/1145 (21%), Positives = 456/1145 (39%), Gaps = 128/1145 (11%) Query: 256 GTLYADLQRTDLSVWRA-YFDYPIAIQSGTGSVRAWLALDHAKVANFTADLALNNFNAQL 314 G Y + + W Y IQ G S+ AW L+H + + + + Q Sbjct: 226 GDFYVSADKVRVLPWLTRYLKDQTGIQKGQVSLNAWATLEHNQPKDGYVEFKPSELVWQN 285 Query: 315 SRQLEPLSLKRVNGRISASESLGATPEDGIPTFGANGHQVTLTDFSIETPDGFVLPPTSI 374 Q L L+ + +E + N H + L D + P + Sbjct: 286 GEQTHELLLESGIVELKPTEK----------GWQVNAHSLRLRS------DDELWPLLDV 329 Query: 375 AESYEPGTPLKAERTSVKATYLNLQTLSQLATRLPLAPSQRKLLDDLAPRGELRDFTVQW 434 A ++P + + + LN++ L LA +P + + L L P+G L D + Sbjct: 330 AMDWQP------DEWRLNLSQLNIENLLPLAKLIPESQTLNHWLTTLKPKGTLEDVRIAK 383 Query: 435 QGTYPELASYRVQGRFSGLGLKGLPAHVEPRRNAAQQVRAQWAGFPGFSNIDGEIDATEK 494 T L S R G+ AQW P + + +I + Sbjct: 384 GAT---LESLRYSASLIDGGI------------------AQWELLPQVNALQAQIQGSPS 422 Query: 495 GGSVKLDSQDLAIEMPAEQFVESSMPFDSLKMQARWQYLKDQTLQVDLEQLQFAQPGVAG 554 +K D +P + ++ + + WQ + + +++ A P + Sbjct: 423 KALIKASMVDDV--LPYGEVFQAPLNIRQGAVNLVWQQ-EQYGWSLWSDKVTVATPDLQA 479 Query: 555 SLSGRHVQPLQGKSAGSVDLHGELSRFDVKAIRRYLPR-HLSEPLRHWLTDGLVDGSLRD 613 + R P ++ + + E F+ RYLP L L +L+ + G + Sbjct: 480 LGAFRLDFP--DDASPFLSFYAEADLFNAGETWRYLPTLALGRELTDYLSTAIQAGQVNT 537 Query: 614 VQFTLKGALADFPFHTAKPGDKPKGQFQLSGDFEGLKLNYTPGHLGRDGKEPEWPLLEEG 673 + GAL FP+ G FQ + K + + WP + + Sbjct: 538 AKLIWYGALDQFPYRMHN------GVFQAWVGLKEAKFAF----------DTAWPPITDL 581 Query: 674 RGHLSIDRTRLEIKADSARTLGAKLGPVTARVADVDSHEAELEIEGVASAPMAVFLR-YV 732 + L + + + + SA + +T R+ ++ + +EIE VASA +R Y+ Sbjct: 582 QLDLLFENDAMYLDSRSATLMEVSAERITGRIPEL-AELGHIEIEAVASAQQGNAIRNYM 640 Query: 733 NQSPVARWTGNLMEHSSATGEARLDLKFQMPLHHAIDTRAQGAFHFANNDVDLLPDLPVL 792 +P+ G + G R + + +P H + RA G +NN VD+ L Sbjct: 641 MATPLVDSVGAALTTIQVKGPVRSEFQLNIPFHSGAEPRAWGFAELSNNAVDIDTPPMSL 700 Query: 793 YRTNGKVEFNEHGFTLNGVRGQFLGDALTI--SGGTQKDGSSQMRLEGAINVDMLRKQYP 850 +GK+EF+ + G+ + L ++I G K G A+ +DM+ Sbjct: 701 TSVSGKIEFDNDRVSAAGLDARLLKQPVSIDFKGEDAKRGY-------AVGIDMVGDWEV 753 Query: 851 EPSL----QRLLARLSGTTRYNATVLVRQHQPEVVVE----SSLAGLGVDLPVPLRKSAQ 902 +P + +R L+R+ G + A+V ++ + + + L GL P PL+K+ Sbjct: 754 KPLIPFVGERWLSRVKGHAPWQASVDIQLNDVGFTYQLDGKADLRGLESRYPFPLKKA-- 811 Query: 903 ESLPLRFELLPLASADPLIEREELKLALGSNIASRYVRERVAATGAAWRVTSGGIGWNQP 962 L ++ + L AS + + L+L A + +V A T+ +G Sbjct: 812 --LKVKGQALLQASGNQEMVSARLQLPQAKYQAEIDLTPKVPVLKA----TNLVLGQGSF 865 Query: 963 APSPSAGLKLALATDSLEVDPWLSLKNELVGPAVAEDASAASTRLGSGDIAQYLEPDQVS 1022 SP G + L + + +D WLS+ NE P + ++L S + + P++V Sbjct: 866 KISPVVGHHVQLRSQAFNLDDWLSILNEKPAP------KSRKSKLASLNTPAFPMPERVD 919 Query: 1023 ARVGELSLKGKKLNKLILEAAHRRNSWQISLESQQVAGTVTWDESGAARGPGKVTARLSS 1082 A V EL+ G + + L A + W ++L+SQ++ G + E P ++ L Sbjct: 920 AAVKELTFAGLDWHDVDLNARRKDLGWLLNLDSQEIKGQANYIE------PYDLSIALER 973 Query: 1083 LVIPKSTPTAENGAATVASEDDKVQ--------------MPALDIRAEQFELGGKKLGRL 1128 L + P E G + + D+ + MP L + + F L G K+G+ Sbjct: 974 LHL--FLPQLEAGEEALLVDLDRQKLPLITDFDRKFHQWMPNLTLTIKDFWLQGYKIGQA 1031 Query: 1129 ELDASNMVTSVGREWRISRLLLANPDAQFRAAGNWMSFGSNHTSNFTYALDIEDAGKLLE 1188 +D ++ W+ + + Q G W + + + ++ L+ Sbjct: 1032 NVDFQRQGDTL--LWK--SIDFTSGTNQLHVNGTWTLTDTQSRTQMNLDMKGDNNSDLMA 1087 Query: 1189 RFGYPGTVRGGKGKLDGDLSWKAPPYAMDMASLAGQVHMDVHAGQFLKVDPGAAKLLGVL 1248 RFG ++ ++ W P++M + +L G+V + G V GAA+LLG+ Sbjct: 1088 RFGINSGIQRAPFEITASTQWDGAPWSMQVNTLQGKVDTKLGKGVISDVS-GAARLLGLF 1146 Query: 1249 NLQALPRRLTLDFRDVFSEGFAFDTVAGTASINKGIASTDNLKMTGVTASVLMSGSADIA 1308 +L ++ R++ LDF DVF +G AFD+++G+ +++GI T+N+KM V + + G AD+ Sbjct: 1147 SLDSIIRKMQLDFSDVFDKGMAFDSISGSGELSQGIFVTNNIKMDAVAGEMTIKGLADLN 1206 Query: 1309 RETQDLHVVVIPEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLS-FEYKVSGSW 1367 T D V +P+I G + A AV P + +LA + +PV++ + Y+V G Sbjct: 1207 TRTVDAEVNFVPDITSGIPVLTAFAVTPQTAL-YVLAITTVISPVVEVFTQVNYEVKGPL 1265 Query: 1368 SDPIV 1372 P V Sbjct: 1266 DSPTV 1270 >YPO3670 [S] COG3164 Predicted membrane protein Ype Yersinia pestis Length = 1307 Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 305/1399 (21%), Positives = 549/1399 (39%), Gaps = 189/1399 (13%) Query: 46 AGYFIFCALFLVLRYAVLPEIGHYKPQIERLVSAQIGRAVSIDVINASWRGLRPQLSLTN 105 A + AL + +LP I Y+PQI + + G + + + +W P L L + Sbjct: 13 ATIIVVVALLVSALRMMLPLINEYRPQIVAKIQSVSGIPLDVGFMQGTWETFGPTLELRD 72 Query: 106 ITVHDQQGEPALTLPQVSTTLS-WSSVVVASLRLENLSIEGA--DLAIRRDAGGKLFVAG 162 I Q + L + +V+ L W S++ + +L+ DL DA Sbjct: 73 IRA--QMPKADLQVQRVTLALDVWQSLLHWRWQFRDLTFYQLQLDLHTTLDA-------- 122 Query: 163 IPVPTGGDGSSLD-------WLLSQREIVIRHSKLRWDDELRQAPELVLEDVNLVLHNRW 215 T +GS+L+ +L +R+S++ + P LE L N Sbjct: 123 ----TQNNGSNLETGNVHNIFLRQLDRFDLRNSRISFLTP--SGPRAELEIPQLTWLNSS 176 Query: 216 LRHR----LSLRAIPPASYAAPLDVRADFSHPAFARSSDILRWKGTLYADLQRTDLSVWR 271 RHR +SL I + VR D + IL GT+Y DL W Sbjct: 177 TRHRAEGQISLSTI--NGQHGVVQVRMDLHD-----NQGILN-NGTVYMQADNIDLKPWI 228 Query: 272 A-YFDYPIAIQSGTGSVRAWLALDHAKVANFTADLALNNFNAQLSRQLEPLSLKR--VNG 328 + + + + S+ AWL++ +V L+ N + LS+ + G Sbjct: 229 SRWLQNNTGLDNAEFSLAAWLSIKSGEVYRGNVLLSQGQANWTVGSNSHQLSVDNFVLEG 288 Query: 329 RISASESLGATPEDGIPTFGANGHQVTLTDFSIETPDGFVLPPTSIAESYEPGT-----P 383 R NG Q+ +++T DG P ++ + P P Sbjct: 289 RRQG-----------------NGWQIDAPVLNLKT-DGQAWPKGRLSALWLPENTQFIGP 330 Query: 384 LKAERTSVKATYLNLQTLSQLATRL-PLAPSQRKLLDDLAPRGELRDFTVQWQGTYPELA 442 + + ++A+ L L+ + L L P P DL P+G + + + PE Sbjct: 331 EQRQELRIRASNLQLERIGPLLPTLSPFTPELLARWADLQPQGYVDALALDIPISQPE-- 388 Query: 443 SYRVQGRFSGLGLKGLPAHVEPRRNAAQQVRAQWAGFPGFSNIDGEIDATEKGGSVKLDS 502 + R Q ++ + + W PG ++ DGE+ + + G + ++ Sbjct: 389 TTRFQAKWHDVSWQ------------------YWGQLPGVNHFDGELSGSARLGRLNINL 430 Query: 503 QDLAIEMPAEQFVESSMPFDSLKMQARWQYLKDQTLQVDLEQLQFAQPGVAGSLSGRHVQ 562 ++ +P + + W+ + D+ + +QL + G+ S ++Q Sbjct: 431 KNSL--LPYGDLFRAPLEVSQASGALNWR-IDDKGWALWSDQLDVQAKSLWGNGSFYYMQ 487 Query: 563 PLQGKSAGS-----VDLHGELSRFDVKAIRRYLPRHL-SEPLRHWLTDGLVDGSLRDVQF 616 P Q S + + + + +D RY P L E L +LT+ L G + + Sbjct: 488 PNQKPSQLNQAQPWLKILAGIRLYDATDAWRYFPVSLMGEKLADYLTEALQGGQVDNATL 547 Query: 617 TLKGALADFPFHTAKPGDKPKGQFQLSGDFEGLKLNYTPGHLGRDGKEPEWPLLEEGRGH 676 G DFP+ + GQFQ+ Y P +P+WP L+ + Sbjct: 548 VYNGNPHDFPYKNKE------GQFQV----------YVPLRNAVFQFQPDWPALD----N 587 Query: 677 LSIDRTRLE--IKADSARTLGAKLGPVTARVADVDSHEAELEIEGVASAPMAVFLRYVNQ 734 L+ID L + ++ TL K+ D + +L ++ Y Sbjct: 588 LAIDLNFLNEGLWMNAPHTLLGKVIGSNISAIIPDYLKEKLYVDADVLGEGRDVHDYFTA 647 Query: 735 SPVARWTGNLMEHSSATGEARLDLKFQMPLHHAIDTRAQGAFHFANNDVDLLPDLPVLYR 794 +P+ ++ G+ L +PL T A G NN + + P L Sbjct: 648 TPLKDSVAETLDELQVGGKISGRLHLDIPLEEESITHASGEVTLNNNSLLVKPLQSQLEN 707 Query: 795 TNGKVEFNEHGFTLNGVRGQFLGDALTISGGTQ---KDGSSQMRLEGAINVDMLRKQYP- 850 NGK F + + + G LT++ T+ KD + L+G D L + P Sbjct: 708 INGKFRFYDGNLESETLSANWYGQPLTVNFTTKEQPKDFLVNVGLQG----DWLPAKLPG 763 Query: 851 -EPSLQRLLARLSGTTRYNATVLVR--QH-QP--EVVVESSLAGLGVDLPVPLRKSAQES 904 SL ++L SG+ + V V+ QH +P +V V + L + LP PL K++ ++ Sbjct: 764 VPDSLAKML---SGSANWQGKVAVKLPQHGKPDYQVDVSADLKKVSSHLPSPLDKNSGQA 820 Query: 905 LPLRFELLPLASADPLIEREELKLALGSNIA--SRYVR--ERVAATGAAWRVTSGGIGWN 960 LPL ++ + +E L + G+N A S+++ E+V A W+ S I Sbjct: 821 LPLHVQV------NGGLEAFTLSGSAGNNNAFNSQWLLQGEKVELARAIWQTDSKKI--- 871 Query: 961 QPAPSPSAGLKLALATDSLEVDPWLSLKNELVGPAVAEDASAASTRLG------------ 1008 PS L +++ + WL+L + P +A AS + Sbjct: 872 ---PSLPDDKALVFKLPAIDGERWLAL----LAPELATAASPFAASFSSPSATSSTQPKI 924 Query: 1009 SGDIAQYLEPDQVSARVGELSLKGKKLNKLILEAAHRRNSWQISLESQQVAGTVTWDESG 1068 G + P +++ + EL + G+ ++L L+A + +I+ + Q+V G++ Sbjct: 925 KGSKTNVILPKRLTLQTPELLVGGQAWHQLTLQADPLPSGMKITAKGQEVDGSLL----M 980 Query: 1069 AARGPGKVTARLSSLVIPKSTPTAENGAATVASEDDKV-------------QMPALDIRA 1115 A GP + A N A S++ V PAL +R Sbjct: 981 ADYGPWHADLNYLYYNPQWGSREANNPLAQAVSQEPTVLQKPQPPSGISFSDWPALQLRC 1040 Query: 1116 EQFELGGKKLGRLELDASNMVTSVGREWRISRLLLANPDAQFRAAGNWMSFGSNHTSNFT 1175 + + G+ +GR+ D +T G ++ L+ + + G W + + Sbjct: 1041 KACWILGQNIGRVNAD----LTPKGSALILTNGLIEAGNGRANITGQWQQDRAGDKTTLN 1096 Query: 1176 YALDIEDAGKLLERFGYPGTVRGGKGKLDGDLSWKAPPYAMDMASLAGQVHMDVHAGQFL 1235 L+ + L FG ++ ++ DL+W+ P+ + +L+G + + GQ Sbjct: 1097 IGLNGPRIDETLSFFGLTTLIKNASFAINADLNWRGVPWEPQINTLSGTLKGRLGKGQLT 1156 Query: 1236 KVDPG-AAKLLGVLNLQALPRRLTLDFRDVFSEGFAFDTVAGTASINKGIASTDNLKMTG 1294 + G A +LL +++ AL R+L LDF D FS FAFD++ TA++ G+ ST++L + G Sbjct: 1157 DLGGGRAGQLLRLVSFDALLRKLQLDFSDTFSRDFAFDSIRSTATLKNGVMSTNDLVIDG 1216 Query: 1295 VTASVLMSGSADIARETQDLHVVVIPEINLGTASVVAMAVNPVVGVSTLLAQLFLRNPVM 1354 + A + M+G D+ + + V+ PE++ A A+NP+VG + A L P+ Sbjct: 1217 LAADIAMNGKVDLVKRQIAMEAVITPELSATVGVATAFAINPIVGAAVFAASKIL-GPLW 1275 Query: 1355 KSLSF-EYKVSGSWSDPIV 1372 +S Y+++GS P + Sbjct: 1276 SKVSLIRYQITGSLDQPTI 1294 >XF1126 [S] COG3164 Predicted membrane protein Xfa Xylella fastidiosa 9a5c Length = 1251 Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 210/827 (25%), Positives = 355/827 (42%), Gaps = 90/827 (10%) Query: 572 VDLHGELSRFDVKAIRRYLPR-HLSEPLRHWLTDGLVDGSLRDVQFTLKGALADFPFHTA 630 + L +L V +R+ R +S L WL LV+GS ++G L D+PF Sbjct: 464 ISLAVQLDDVAVPVAKRFWVRSKMSRELIDWLNAALVNGSTSGGFALIEGELKDWPF--- 520 Query: 631 KPGDKPKGQFQLSGDFEGLKLNYTPGHLGRDGKEPEWPLLEEGRGHLSIDRTRLEIKADS 690 + G F+ +G G + + + EWP+LE+ ++ IK Sbjct: 521 ---NNHDGYFEAAGRIHGGVMRF----------QSEWPVLEKLDADIAFIGNGFSIKG-- 565 Query: 691 ARTLGAKLGPVTARVADVDSHEAELEIEGVASAPMAVFLRYVNQSPVARWTGNLMEHSSA 750 R A + V D + +L + + L + +SP+ + + ++ SA Sbjct: 566 -RGELAGVPQVQLEAGIEDFEKGDLYVRAHVQSDATRLLGLLRRSPLHQHDADTLDSVSA 624 Query: 751 TGEARLDLKFQMPLHHAIDTRAQGAFHFANNDVDLLPDLPVLYR--------TNGKVEFN 802 +G A + Q+PL H QGA + L ++ ++R G V ++ Sbjct: 625 SGPASVSFDMQLPLRHE-----QGADYGHFGGEVSLENVNFIHRRWNLAFENVRGPVRYS 679 Query: 803 EHGFTLNG--VRGQFLGDALTISGGTQKDGSSQM---RLEGAINVDMLRKQYPEPSLQRL 857 GF+ G V Q L L++ G D +Q+ RL ++NV L + P+ + L Sbjct: 680 SDGFSAEGLHVLHQGLEGRLSVRVGDAVDDPAQIFQARLLASVNVKSLLRHAPQ--MDWL 737 Query: 858 LARLSGTTRYNATVLVRQHQPE-------VVVESSLAGLGVDLPVPLRKSAQESLPLRFE 910 ++G +++ + + + P+ + ++S L G ++LPVPL K + LP + Sbjct: 738 RPYVNGISQWRIGIDLAKGAPDAHRVFGHLTLDSDLVGTALNLPVPLDKGSGRVLPAHID 797 Query: 911 L-LPLASADPLIEREELKLALGSNIASRYVRERVAATGAAWRVTSGGIGWNQPAPSP-SA 968 + LP+ E+ ++ LALG +A+R VR R G RV +G + +P Sbjct: 798 VALPM-------EQGDIALALGKLVAAR-VRHR-EGEGIGVRVV---MGSDNVRDAPLEH 845 Query: 969 GLKLALATDSLEVDPWLSLKNELVGPAVAEDASAASTRLGSGDIAQYLEPDQVSARVGEL 1028 GL + + SL+ W+ L G AV+ D L + +V L Sbjct: 846 GLVVIGHSTSLDAIDWMRLVRG--GSAVSSD----------------LPLRLIDLQVDSL 887 Query: 1029 SLKGKKLNKLILEAAHRRNSWQISLESQQVAGTVTWDESGAARGPGKVTARLSSLVIPKS 1088 L G + ++++ ++G + ES G VT L L + Sbjct: 888 LLLGGMFPNTRFQLRPVHQGVAVAVDGPALSGQLNVPESI----DGTVTGSLGVLHWQAA 943 Query: 1089 TPTAENGAATVAS---EDDKVQMPALDIRAEQFELGGKKLGRLELDASNMVTSVGREWRI 1145 + + +V S + D +P+L E + G K GR+EL +M + ++ Sbjct: 944 QAPSVKVSGSVQSAMVDVDPASIPSLAFEVEDAKFGQVKFGRMELRTRHMSDGM----QV 999 Query: 1146 SRLLLANPDAQFRAAGNWMSFGSNHTSNFTYALDIEDAGKLLERFGYPGTVRGGKGKLDG 1205 +L +P + W G + + +D D G+L + GY +RGG+G++ Sbjct: 1000 DQLQTNSPSQRLSMFATWRGKGEAASIRLSARVDSRDLGELAQAIGYGEQLRGGEGQIQL 1059 Query: 1206 DLSWKAPPYAMDMASLAGQVHMDVHAGQFLKVDPGAAKLLGVLNLQALPRRLTLDFRDVF 1265 W PP +ASL+G + + GQ L++ PGA ++LG+L++ LPRRL LDFRD+F Sbjct: 1060 SAGWNGPPVGFQLASLSGDLKVTARNGQLLELKPGAGRVLGLLSVTQLPRRLMLDFRDLF 1119 Query: 1266 SEGFAFDTVAGTASINKGIASTDNLKMTGVTASVLMSGSADIARETQDLHVVVIPEINLG 1325 S+G AF+ G G A D LK+ G ++ + G +D++ +T D V V P+ Sbjct: 1120 SKGLAFNRFYGEVHFGDGQARADGLKIEGPAVNIAIRGQSDLSTQTFDQIVDVNPKSGNL 1179 Query: 1326 TASVVAMAVNPVVGVSTLLAQLFLRNPVMKSLSFEYKVSGSWSDPIV 1372 V A+A PV A + L P+ + Y VSG W+DP V Sbjct: 1180 LTVVGAVAGGPVGAAVGAAANMVLGKPLGAIGAKTYHVSGPWNDPKV 1226