BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0075.p         (82 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc0549 [T] COG0642 Signal transduction histidine kinase Rso Ral...    88   4e-18

>RSc0549 [T] COG0642 Signal transduction histidine kinase Rso Ralstonia
           solanacearum
          Length = 513

 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 41/57 (71%), Positives = 50/57 (87%)

Query: 1   MLAPLLLLWPMSIAITYLIAQSIANQPFDRALEDSVTVLAQQVSEVNGKVVARLPVS 57
           MLAPLLLLWPMSIA+TYL+A+SIAN P+DRALE S  VL+QQ+ EVNG+V  +LP+S
Sbjct: 55  MLAPLLLLWPMSIAVTYLVAKSIANAPYDRALESSAIVLSQQLHEVNGRVTLQLPIS 111