BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0069.p         (64 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2466 [K] COG1278 Cold shock proteins Rso Ralstonia solanacearum    116   1e-26
RSp1053 [K] COG1278 Cold shock proteins Rso Ralstonia solanacearum    114   4e-26
NMA1047 [K] COG1278 Cold shock proteins NmA Neisseria meningitid...   113   1e-25
NMB0838 [K] COG1278 Cold shock proteins Nme Neisseria meningitid...   112   1e-25
RSp0002 [K] COG1278 Cold shock proteins Rso Ralstonia solanacearum    100   6e-22

>RSc2466 [K] COG1278 Cold shock proteins Rso Ralstonia solanacearum
          Length = 67

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 59/61 (96%)

Query: 1  MATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFDVTQGPKGKQ 60
          MA GTVKWFND+KGFGFI+PD+GGE+LFAHFSAIQMNGFKTLKEGQ+V FDVTQGPKGKQ
Sbjct: 1  MANGTVKWFNDAKGFGFISPDEGGEELFAHFSAIQMNGFKTLKEGQRVAFDVTQGPKGKQ 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>RSp1053 [K] COG1278 Cold shock proteins Rso Ralstonia solanacearum
          Length = 67

 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 58/61 (95%)

Query: 1  MATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFDVTQGPKGKQ 60
          MATGTVKWFND+KGFGFITPD+GGEDLFAHFSAI M GFKTLKEGQ+V F++TQGPKGKQ
Sbjct: 1  MATGTVKWFNDAKGFGFITPDEGGEDLFAHFSAINMQGFKTLKEGQRVSFEITQGPKGKQ 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>NMA1047 [K] COG1278 Cold shock proteins NmA Neisseria meningitidis Z2491
          Length = 67

 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 57/61 (93%)

Query: 1  MATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFDVTQGPKGKQ 60
          MATG VKWFND+KGFGFITPD+GGEDLFAHFSAI M+GFKTLKEGQ+V FDVT GPKGKQ
Sbjct: 1  MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMDGFKTLKEGQRVSFDVTTGPKGKQ 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>NMB0838 [K] COG1278 Cold shock proteins Nme Neisseria meningitidis MC58
          Length = 67

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 53/61 (86%), Positives = 56/61 (91%)

Query: 1  MATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFDVTQGPKGKQ 60
          MATG VKWFND+KGFGFITPD+GGEDLFAHFSAI M GFKTLKEGQ+V FDVT GPKGKQ
Sbjct: 1  MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGKQ 60

Query: 61 A 61
          A
Sbjct: 61 A 61


>RSp0002 [K] COG1278 Cold shock proteins Rso Ralstonia solanacearum
          Length = 67

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 49/61 (80%), Positives = 54/61 (88%)

Query: 1  MATGTVKWFNDSKGFGFITPDDGGEDLFAHFSAIQMNGFKTLKEGQKVQFDVTQGPKGKQ 60
          MATGTVKWFN++KGFGFITPD GG DLFAHFS IQ +GFKTLK+GQKV F+V QGPKG Q
Sbjct: 1  MATGTVKWFNETKGFGFITPDGGGADLFAHFSEIQGSGFKTLKDGQKVSFEVKQGPKGLQ 60

Query: 61 A 61
          A
Sbjct: 61 A 61