BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0064.p         (88 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2556 [J] COG0268 Ribosomal protein S20 Rso Ralstonia solanace...   130   9e-31
NMB0463 [J] COG0268 Ribosomal protein S20 Nme Neisseria meningit...   117   5e-27
NMA2022 [J] COG0268 Ribosomal protein S20 NmA Neisseria meningit...   117   5e-27
PA4563 [J] COG0268 Ribosomal protein S20 Pae Pseudomonas aeruginosa    92   3e-19
HI0965 [J] COG0268 Ribosomal protein S20 Hin Haemophilus influenzae    79   2e-15

>RSc2556 [J] COG0268 Ribosomal protein S20 Rso Ralstonia solanacearum
          Length = 88

 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 70/88 (79%), Positives = 79/88 (89%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MANTAQARKRARQAV QNAHNS+ RS LRTA+KAVRKAIA GDKAAA +VF+ + STIDS
Sbjct: 1  MANTAQARKRARQAVVQNAHNSALRSRLRTAVKAVRKAIAGGDKAAAANVFKQAQSTIDS 60

Query: 61 IADKKIIHKNKAARHKSRLAAALKALAA 88
          IADKKI+HKNKAAR KSRL+AA+KA+ A
Sbjct: 61 IADKKIVHKNKAARAKSRLSAAIKAMGA 88


>NMB0463 [J] COG0268 Ribosomal protein S20 Nme Neisseria meningitidis MC58
          Length = 87

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/87 (70%), Positives = 72/87 (82%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MAN+AQARKRARQ+VKQ AHN+S R+  RTA+K V KA+ AGDKAAA +V+Q SV  ID 
Sbjct: 1  MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR 60

Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87
          IADK + HKNKAARHKSRL+A +KALA
Sbjct: 61 IADKGVFHKNKAARHKSRLSAKVKALA 87


>NMA2022 [J] COG0268 Ribosomal protein S20 NmA Neisseria meningitidis
          Z2491
          Length = 87

 Score =  117 bits (294), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 61/87 (70%), Positives = 72/87 (82%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MAN+AQARKRARQ+VKQ AHN+S R+  RTA+K V KA+ AGDKAAA +V+Q SV  ID 
Sbjct: 1  MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDKAAAQAVYQESVKVIDR 60

Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87
          IADK + HKNKAARHKSRL+A +KALA
Sbjct: 61 IADKGVFHKNKAARHKSRLSAKVKALA 87


>PA4563 [J] COG0268 Ribosomal protein S20 Pae Pseudomonas aeruginosa
          Length = 91

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/87 (58%), Positives = 64/87 (73%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          MANT  A+KRA+QA K+ +HN+S RS +RT IK V KAI A D   A + F ++V  ID 
Sbjct: 1  MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDLEKAQAAFTAAVPVIDR 60

Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87
          +ADK IIHKNKAARHKSRL+  +KAL+
Sbjct: 61 MADKGIIHKNKAARHKSRLSGHIKALS 87


>HI0965 [J] COG0268 Ribosomal protein S20 Hin Haemophilus influenzae
          Length = 89

 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/87 (50%), Positives = 59/87 (67%)

Query: 1  MANTAQARKRARQAVKQNAHNSSQRSTLRTAIKAVRKAIAAGDKAAATSVFQSSVSTIDS 60
          +AN   A+KRA Q+ K+  HN+SQRS +RT IK V   +AAG+K+AA + F      +D 
Sbjct: 3  LANIKSAKKRAVQSEKRRQHNASQRSMMRTYIKKVYAQVAAGEKSAAEAAFVEMQKVVDR 62

Query: 61 IADKKIIHKNKAARHKSRLAAALKALA 87
          +A K +IH NKAA HKS+LAA +K LA
Sbjct: 63 MASKGLIHANKAANHKSKLAAQIKKLA 89