BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0037.p         (173 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMb20392 [K] COG2186 Transcriptional regulators Sme Sinorhizobiu...   145   4e-35
mlr7008 [K] COG2186 Transcriptional regulators Mlo Mesorhizobium...   143   2e-34
STM3340 [K] COG2186 Transcriptional regulators Sty Salmonella ty...   101   7e-22
ZyhcK [K] COG2186 Transcriptional regulators EcZ Escherichia col...    97   1e-20
nanR [K] COG2186 Transcriptional regulators Eco Escherichia coli...    97   2e-20

>SMb20392 [K] COG2186 Transcriptional regulators Sme Sinorhizobium meliloti
          Length = 235

 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 75/167 (44%), Positives = 105/167 (62%)

Query: 1   VEIAHGERARVVDPTAERLIAQIAAGAQHLLRTKPDMLQHLKEARVFLETSTARMAAARA 60
           +EI+HGERA+V+ PTA  L+ Q+ A A+ +L    D L+HLK AR+F E   AR AA+RA
Sbjct: 64  IEISHGERAKVLQPTARSLLRQVDAAAKIMLAASSDSLEHLKSARIFFERGMAREAASRA 123

Query: 61  TPEQIERLRQTVTAHRASMVDLGEFIERDMAFHREIADISGNPIFPSIVESLFRWASEFY 120
               I  L +T+   +A++ D   FI  DMAFH  IA ISGNPI+ ++ E++  W  E++
Sbjct: 124 DAGDIAALEETLKRQQAALEDSDAFIAADMAFHTRIAQISGNPIYTAVSEAMLGWLKEYH 183

Query: 121 TPMVRAPGAEELTLAEHTRIVDAIAAGDGDAAAEAMRVHLVRANELY 167
           T M+   G E +TL EH  I+D I +G+ D A +AM  HL R+  LY
Sbjct: 184 TEMLIWTGRENVTLTEHEEIIDCIRSGNPDEAEQAMIRHLERSRTLY 230


>mlr7008 [K] COG2186 Transcriptional regulators Mlo Mesorhizobium loti
          Length = 237

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 102/167 (61%)

Query: 1   VEIAHGERARVVDPTAERLIAQIAAGAQHLLRTKPDMLQHLKEARVFLETSTARMAAARA 60
           V I+HGERA+V+  TA+ +I Q+   A+ +L +  D L+HLK AR+F E    R AA +A
Sbjct: 65  VAISHGERAKVLQLTAKSIIKQVDGAAKIILSSSKDTLEHLKTARIFFERGMVREAAEKA 124

Query: 61  TPEQIERLRQTVTAHRASMVDLGEFIERDMAFHREIADISGNPIFPSIVESLFRWASEFY 120
           T E ++RL+ TV   RA+  D   FI  DM FH +IA ISGNPI+ ++ E++  W  E++
Sbjct: 125 TVEDVQRLKATVAEQRAARGDSEAFISADMKFHTQIAAISGNPIYVAVSEAMLGWLKEYH 184

Query: 121 TPMVRAPGAEELTLAEHTRIVDAIAAGDGDAAAEAMRVHLVRANELY 167
           T M+   G E+ TL EH  I+  I   D D A +AM  HL R+  LY
Sbjct: 185 TEMLIWTGKEQFTLTEHEEIIGRIEKKDADGAEKAMIKHLERSRALY 231


>STM3340 [K] COG2186 Transcriptional regulators Sty Salmonella typhimurium
           LT2
          Length = 263

 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/175 (36%), Positives = 97/175 (55%), Gaps = 3/175 (1%)

Query: 1   VEIAHGERARVVDPTAERLIAQIAAGAQHLLRTKPDMLQHLKEARVFLETSTARMAAARA 60
           V+I +GERARV  P+A+ +I++++  A+  L T P  + H ++ R+F E+S  R AA  A
Sbjct: 85  VQINNGERARVSRPSADTIISELSGMAKDFL-THPGGIAHFEQLRLFFESSLVRYAAEHA 143

Query: 61  TPEQIERLRQTVTAHRASMVDLGEFIERDMAFHREIADISGNPIFPSIVESLFRW--ASE 118
           T EQI  L + +  +  S+ D   FI  D+ FHR +A+I GNPIF +I  +L  W  A+ 
Sbjct: 144 TDEQIALLTKALEINSQSLDDNALFIRSDVEFHRVLAEIPGNPIFMAIHVALLDWLIAAR 203

Query: 119 FYTPMVRAPGAEELTLAEHTRIVDAIAAGDGDAAAEAMRVHLVRANELYRRLGQQ 173
              P         ++  +H  IVDAI   D D A  A++ HL   +  +  LG++
Sbjct: 204 PSVPDRELHEHNNVSYQQHIVIVDAIRQRDPDKADRALQTHLNSVSATWHALGKK 258


>ZyhcK [K] COG2186 Transcriptional regulators EcZ Escherichia coli O157:H7
           EDL933
          Length = 263

 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 5/175 (2%)

Query: 1   VEIAHGERARVVDPTAERLIAQIAAGAQHLLRTKPDMLQHLKEARVFLETSTARMAAARA 60
           V+I +GERARV  P+A+ +I +++  A+  L + P  + H ++ R+F E+S  R AA  A
Sbjct: 85  VQINNGERARVSRPSADTIIGELSGMAKBFL-SHPGGIAHFEQLRLFFESSLVRYAAEHA 143

Query: 61  TPEQIERLRQTVTAHRASMVDLGEFIERDMAFHREIADISGNPIFPSIVESLFRWASEFY 120
           T EQI+ L + +  +  S+ +   FI  D+ FHR +A+I GNPIF +I  +L  W     
Sbjct: 144 TDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIA-A 202

Query: 121 TPMVRAPGAEE---LTLAEHTRIVDAIAAGDGDAAAEAMRVHLVRANELYRRLGQ 172
            P V      E   ++  +H  IVDAI   D D A  A++ HL   +  +   GQ
Sbjct: 203 RPTVADQALHEHNNVSYQQHIAIVDAIRRHDPDXADRALQSHLNSVSATWHAFGQ 257


>nanR [K] COG2186 Transcriptional regulators Eco Escherichia coli K12
          Length = 263

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 5/175 (2%)

Query: 1   VEIAHGERARVVDPTAERLIAQIAAGAQHLLRTKPDMLQHLKEARVFLETSTARMAAARA 60
           V+I +GERARV  P+A+ +I +++  A+  L + P  + H ++ R+F E+S  R AA  A
Sbjct: 85  VQINNGERARVSRPSADTIIGELSGMAKDFL-SHPGGIAHFEQLRLFFESSLVRYAAEHA 143

Query: 61  TPEQIERLRQTVTAHRASMVDLGEFIERDMAFHREIADISGNPIFPSIVESLFRWASEFY 120
           T EQI+ L + +  +  S+ +   FI  D+ FHR +A+I GNPIF +I  +L  W     
Sbjct: 144 TDEQIDLLAKALEINSQSLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIA-A 202

Query: 121 TPMVRAPGAEE---LTLAEHTRIVDAIAAGDGDAAAEAMRVHLVRANELYRRLGQ 172
            P V      E   ++  +H  IVDAI   D D A  A++ HL   +  +   GQ
Sbjct: 203 RPTVTDQALHEHNNVSYQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQ 257