BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0032.0026.p (271 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 271 1e-72 PA0176 [NT] COG0840 Methyl-accepting chemotaxis protein Pae Pseu... 271 2e-72 RSp0303 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 267 2e-71 RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 267 2e-71 RSc0606 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ral... 266 5e-71 >RSc3412 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 144/209 (68%), Positives = 175/209 (83%) Query: 1 MEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDIISVI 60 M+EL STV NA+NARQAN LA AS VA +GG VV +VV M IND S+KI DII VI Sbjct: 305 MDELGSTVGNNAENARQANQLASGASSVAAEGGEVVSQVVGMMKGINDGSKKIADIIGVI 364 Query: 61 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDASVERV 120 DGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVR+LAQRSAAAAKEIK+LI +SVE+V Sbjct: 365 DGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAAAAKEIKALITSSVEQV 424 Query: 121 ESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVTQQNA 180 E G+ LV +AGATME++V +++RV+++VAEI++AS EQS G+ Q+ QA+ QMDE TQQNA Sbjct: 425 EQGTTLVDRAGATMEQIVGAIQRVSNIVAEISSASAEQSSGVSQVGQAVSQMDEATQQNA 484 Query: 181 ALVEQAAAAAQSLQEQSGRLSETVGIFRL 209 ALVEQ+AAAA SLQ Q+ +L + V +F+L Sbjct: 485 ALVEQSAAAASSLQGQAQQLVQAVAVFKL 513 >PA0176 [NT] COG0840 Methyl-accepting chemotaxis protein Pae Pseudomonas aeruginosa Length = 679 Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 166/271 (61%), Positives = 207/271 (76%), Gaps = 17/271 (6%) Query: 1 MEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDIISVI 60 MEELTSTV+ NA+NARQAN+LA AS+VA QGG+VV +VV TM IN+++RKI DII VI Sbjct: 426 MEELTSTVKLNAENARQANSLAANASEVATQGGTVVQKVVSTMSSINESARKIADIIGVI 485 Query: 61 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDASVERV 120 DGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRTLAQRSAAAAKEIK+LI SV++V Sbjct: 486 DGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAAAAKEIKTLISDSVDKV 545 Query: 121 ESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVTQQNA 180 E+G+ LV QAG TM ++V +++RVTD+++EI AAS EQS GIE++N A+ QMD++TQQNA Sbjct: 546 ENGNTLVAQAGQTMSDIVVAIRRVTDIMSEIAAASAEQSTGIEEVNSAVSQMDDMTQQNA 605 Query: 181 ALVEQAAAAAQSLQEQSGRLSETVGIFRLGNDHAHQPSPLSAPVLRSVQVAPARPVLARK 240 ALVE+AAAAA+++QEQ+G L+++V +FRL +P S VQ+A ARP Sbjct: 606 ALVEEAAAAAEAMQEQAGLLNQSVAVFRL-------DTPPSV-----VQLASARP----- 648 Query: 241 PVTRTSAPAKSIAAAQPVAQAALADGQWEQF 271 R SAPA + A A + WE+F Sbjct: 649 SAPRPSAPAPLARSGMARASKARKEDGWEEF 679 >RSp0303 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 515 Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/209 (74%), Positives = 182/209 (87%) Query: 1 MEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDIISVI 60 MEELTS V+QNADNARQA+TLAE AS +A+QGG+VV +VV TM QI+++SRKI DII+VI Sbjct: 305 MEELTSIVKQNADNARQASTLAENASGIAMQGGAVVQDVVTTMAQISESSRKITDIIAVI 364 Query: 61 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDASVERV 120 +GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRTLAQRSA AAKEIKSLI+ S RV Sbjct: 365 EGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLAQRSAGAAKEIKSLIEDSATRV 424 Query: 121 ESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVTQQNA 180 ESGS LV +AG TM+E+V +VKRVTD++ EI+A S EQS GIEQIN+A+ QMD+VTQQNA Sbjct: 425 ESGSSLVARAGKTMDEIVVAVKRVTDIMGEISAGSAEQSTGIEQINEAVTQMDDVTQQNA 484 Query: 181 ALVEQAAAAAQSLQEQSGRLSETVGIFRL 209 ALVEQAAAAAQ+L+EQ+ L V +FR+ Sbjct: 485 ALVEQAAAAAQALEEQADELRRAVSVFRV 513 >RSp1363 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 543 Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 140/212 (66%), Positives = 176/212 (83%) Query: 1 MEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDIISVI 60 ME+LTSTV+QNADNA++A+ LA AS VA +GG V E +QTM IN +SRKIVDII VI Sbjct: 305 MEQLTSTVKQNADNAQEASRLASNASMVATKGGDAVDEAIQTMSTINTSSRKIVDIIGVI 364 Query: 61 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDASVERV 120 DGIAFQTNILALNAAVEAARAGEQGRGFAVVA EVR+LAQRSAAAAKEIK+LI+ SV V Sbjct: 365 DGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAAAAKEIKALIEDSVGHV 424 Query: 121 ESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVTQQNA 180 +G+ V +AG + +VVA ++ VT++V+EI+A+S EQSDGIEQIN+AI QMD+ TQ+NA Sbjct: 425 STGTAKVEEAGQIIRDVVAGIQNVTNIVSEISASSREQSDGIEQINEAITQMDKATQENA 484 Query: 181 ALVEQAAAAAQSLQEQSGRLSETVGIFRLGND 212 +LVE++A AAQ+LQ+Q+ +L++ V F+L D Sbjct: 485 SLVEESATAAQALQDQANQLADMVSTFKLHAD 516 >RSc0606 [NT] COG0840 Methyl-accepting chemotaxis protein Rso Ralstonia solanacearum Length = 617 Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 156/211 (73%), Positives = 184/211 (87%) Query: 1 MEELTSTVRQNADNARQANTLAETASQVAIQGGSVVGEVVQTMGQINDASRKIVDIISVI 60 MEELTS V+QNADNARQA++LA AS VA +GGSVVG+VVQTMG IN++S+KI DII VI Sbjct: 407 MEELTSIVKQNADNARQASSLAVNASDVATRGGSVVGQVVQTMGGINESSKKIADIIGVI 466 Query: 61 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAAAAKEIKSLIDASVERV 120 + IAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA AAKEIK+LI SV+RV Sbjct: 467 ESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAGAAKEIKALIHDSVDRV 526 Query: 121 ESGSRLVGQAGATMEEVVASVKRVTDVVAEITAASGEQSDGIEQINQAIVQMDEVTQQNA 180 +G+ LV QAG TM E+V +VKRVTD++ EI+AAS EQS GIEQ+NQA+ QMD+VTQQNA Sbjct: 527 SNGTALVDQAGVTMAEIVEAVKRVTDIMGEISAASEEQSSGIEQVNQAVNQMDQVTQQNA 586 Query: 181 ALVEQAAAAAQSLQEQSGRLSETVGIFRLGN 211 ALVEQAAAAA+SL+EQ+ L++ VG FRL + Sbjct: 587 ALVEQAAAAAESLEEQARNLNDAVGSFRLSH 617