BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0032.0005.p         (288 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DR1856 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su...   104   3e-22
CC2613 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su...    97   4e-20
DR1377 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A su...    96   9e-20
AGl3143 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A s...    96   1e-19
BMEI1360 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A ...    95   2e-19

>DR1856 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases Dra Deinococcus radiodurans
          Length = 482

 Score =  104 bits (259), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 71/107 (66%)

Query: 1   MHELAYGMTGINDWNGTAVNPQDPARMTGGSSSGSASAVGAGLVDVSIGSDTGGSIRLPA 60
           M E A G +  +  +G  +NP D  R+ GGSS GSA AV AG+  VS+GSDTGGS+R PA
Sbjct: 120 MDEFAMGSSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQPA 179

Query: 61  ACCGVIGFKPSFGRVSRAGAYPALSSLDCLGPFSRSMDLIISAMASI 107
           A CGV GFKP++GRVSR G     SSLD +GPF+RS + +   M  I
Sbjct: 180 ALCGVYGFKPTYGRVSRYGLVAYASSLDQIGPFARSAEDLALLMNVI 226


>CC2613 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases Ccr Caulobacter vibrioides
          Length = 464

 Score = 97.4 bits (241), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 71/98 (72%)

Query: 1   MHELAYGMTGINDWNGTAVNPQDPARMTGGSSSGSASAVGAGLVDVSIGSDTGGSIRLPA 60
           M E AYG    N  +G   NP DP R+ GGSS GSA+AV AGLV +++GSDT GSIR+PA
Sbjct: 123 MDEFAYGFVTENAHDGPVRNPHDPTRIAGGSSGGSAAAVAAGLVPLTLGSDTNGSIRIPA 182

Query: 61  ACCGVIGFKPSFGRVSRAGAYPALSSLDCLGPFSRSMD 98
             CGV G KP++GR+SR G +P + SLD +GPF+RS++
Sbjct: 183 GLCGVFGLKPTYGRLSRQGVFPFVESLDHVGPFARSVE 220


>DR1377 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases Dra Deinococcus radiodurans
          Length = 394

 Score = 95.9 bits (237), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 48/109 (44%), Positives = 73/109 (66%), Gaps = 3/109 (2%)

Query: 1   MHELAYGMTGINDWNGTAVNPQDPARMTGGSSSGSASAVGAGLVDVSIGSDTGGSIRLPA 60
           +HE+A G+TG+N + GT  +P+DP R+ GGSSSG+A +V  G VD ++G+DTGGSIR+PA
Sbjct: 86  LHEVALGITGMNGYGGTT-HPRDPERVPGGSSSGAAVSVALGQVDFALGTDTGGSIRVPA 144

Query: 61  ACCGVIGFKPSFGR--VSRAGAYPALSSLDCLGPFSRSMDLIISAMASI 107
           A C V+G+KP+ G    S  G  P   + D  GP +R + +++    ++
Sbjct: 145 AWCSVVGYKPTKGHPAWSTEGVLPLSWTCDHAGPLARDLSMVVRVYQAL 193


>AGl3143 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases Atu Agrobacterium tumefaciens strain
           C58 (Cereon)
          Length = 403

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/99 (53%), Positives = 65/99 (65%), Gaps = 2/99 (2%)

Query: 1   MHELAYGMTGINDWNGTAVNP--QDPARMTGGSSSGSASAVGAGLVDVSIGSDTGGSIRL 58
           M E A+   GIN   GT  NP   D  R+ GGSSSG+   V AGLV V+IG+DTGGS+R+
Sbjct: 74  MSEFAFSGLGINPHYGTPRNPVSTDGHRLPGGSSSGAGVVVAAGLVPVAIGTDTGGSVRI 133

Query: 59  PAACCGVIGFKPSFGRVSRAGAYPALSSLDCLGPFSRSM 97
           PAA  GV+G+K S GR S  G YP   SLD LGP +R++
Sbjct: 134 PAAFNGVVGYKASRGRYSMHGVYPLAKSLDSLGPLTRTV 172


>BMEI1360 [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and
           related amidases Bme Brucella melitensis
          Length = 471

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 66/97 (68%)

Query: 1   MHELAYGMTGINDWNGTAVNPQDPARMTGGSSSGSASAVGAGLVDVSIGSDTGGSIRLPA 60
           M E A+   G+N   G   N  DPAR+ GGSSSG+A +V  G  +++IGSDTGGS+R+PA
Sbjct: 133 MTEFAFTPVGLNPHYGEPGNAIDPARIPGGSSSGAAVSVAEGTSEIAIGSDTGGSVRIPA 192

Query: 61  ACCGVIGFKPSFGRVSRAGAYPALSSLDCLGPFSRSM 97
           A  G++GFKP+  R+   GA+P   SLD +GP +R++
Sbjct: 193 ALNGLVGFKPTARRIPLEGAFPLAPSLDSVGPLTRTV 229