BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0068.p         (112 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

STM3414 [J] COG0203 Ribosomal protein L17 Sty Salmonella typhimu...   166   9e-42
rplQ [J] COG0203 Ribosomal protein L17 Eco Escherichia coli K12       164   4e-41
ZrplQ [J] COG0203 Ribosomal protein L17 EcZ Escherichia coli O15...   164   4e-41
ECs4159 [J] COG0203 Ribosomal protein L17 Ecs Escherichia coli O...   164   4e-41
RSc2992 [J] COG0203 Ribosomal protein L17 Rso Ralstonia solanace...   162   2e-40

>STM3414 [J] COG0203 Ribosomal protein L17 Sty Salmonella typhimurium LT2
          Length = 127

 Score =  166 bits (421), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 79/106 (74%), Positives = 91/106 (85%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60
           M RNM  SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL
Sbjct: 20  MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106
           F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E T+AA
Sbjct: 80  FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKTEAA 125


>rplQ [J] COG0203 Ribosomal protein L17 Eco Escherichia coli K12
          Length = 127

 Score =  164 bits (416), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 90/106 (84%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60
           M RNM  SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL
Sbjct: 20  MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106
           F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E  +AA
Sbjct: 80  FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125


>ZrplQ [J] COG0203 Ribosomal protein L17 EcZ Escherichia coli O157:H7
           EDL933
          Length = 127

 Score =  164 bits (416), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 90/106 (84%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60
           M RNM  SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL
Sbjct: 20  MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106
           F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E  +AA
Sbjct: 80  FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125


>ECs4159 [J] COG0203 Ribosomal protein L17 Ecs Escherichia coli O157:H7
          Length = 127

 Score =  164 bits (416), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/106 (73%), Positives = 90/106 (84%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60
           M RNM  SL+RHE IKTTLPKAKELRRVVEP++TL KTD++AN+RLAF R RD EIV KL
Sbjct: 20  MFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAA 106
           F+ELGPR+A+R GGY RILK GFR GDNAPMA++ELVDR E  +AA
Sbjct: 80  FNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEKAEAA 125


>RSc2992 [J] COG0203 Ribosomal protein L17 Rso Ralstonia solanacearum
          Length = 132

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 78/100 (78%), Positives = 88/100 (88%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 60
           MLRNM+ SL +HE IKTTLPKAKELR+VVEP++TL K DT+AN+RLAF RLRDR++V KL
Sbjct: 20  MLRNMSNSLFQHELIKTTLPKAKELRKVVEPLITLAKKDTVANRRLAFARLRDRDMVTKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRP 100
           F+ELGPRYA R GGY RILK GFRQGDNAPMA VELVDRP
Sbjct: 80  FTELGPRYATRPGGYTRILKFGFRQGDNAPMALVELVDRP 119