BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0060.p         (153 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

PA0269 [S] COG2128 Uncharacterized conserved protein Pae Pseudom...   135   3e-32
STM2804 [S] COG2128 Uncharacterized conserved protein Sty Salmon...   134   7e-32
Z3974 [S] COG2128 Uncharacterized conserved protein EcZ Escheric...   132   2e-31
ECs3535 [S] COG2128 Uncharacterized conserved protein Ecs Escher...   132   2e-31
SMc02239 [S] COG2128 Uncharacterized conserved protein Sme Sinor...   124   5e-29

>PA0269 [S] COG2128 Uncharacterized conserved protein Pae Pseudomonas
           aeruginosa
          Length = 145

 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 92/142 (64%), Gaps = 2/142 (1%)

Query: 7   RLPHAKLAAPAFNALIKASEVVHQSGVDPKLLELVFLRVSQLNGCAFCVDMHSHDLLQKG 66
           RL  AK +  A+ A++   + + ++G++  L+ELV+LR SQ+NGCA+CV+MH++D  + G
Sbjct: 4   RLEWAKASPDAYAAMLGLEKALAKAGLERPLIELVYLRTSQINGCAYCVNMHANDARKAG 63

Query: 67  EDQQRLNTLAAWREIPFFTDAERAALNWAERFTHLHQQDADKEDAAFVQLQQHFNDTEIA 126
           E +QRL  L  W+E P+FT  ERAAL W E+   L Q           +L++HF+D EIA
Sbjct: 64  ETEQRLQALCVWQETPYFTPRERAALAWTEQLARLSQ--GALPHGLLDELREHFDDKEIA 121

Query: 127 NLTFAVAIINAWNRLGVSMRPQ 148
            LT AV+ INAWNR GV M  Q
Sbjct: 122 ELTLAVSAINAWNRFGVGMGMQ 143


>STM2804 [S] COG2128 Uncharacterized conserved protein Sty Salmonella
           typhimurium LT2
          Length = 143

 Score =  134 bits (337), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 96/140 (68%), Gaps = 2/140 (1%)

Query: 7   RLPHAKLAAPAFNALIKASEVVHQSGVDPKLLELVFLRVSQLNGCAFCVDMHSHDLLQKG 66
           R P+ +L+   ++AL++A   + +S +DP L+EL++LRVSQ+NGCAFC++MHS  L + G
Sbjct: 5   RQPYYELSPEVYSALVQAKNALEKSTLDPTLMELIYLRVSQINGCAFCLEMHSKALRKAG 64

Query: 67  EDQQRLNTLAAWREIPFFTDAERAALNWAERFTHLHQQDADKEDAAFVQLQQHFNDTEIA 126
            +Q +L+ LA WR    F++ E AAL WAE  TH+ +  A  ED  ++ L  HF+  EI+
Sbjct: 65  VNQAKLDALAGWRVSHHFSEQECAALAWAESVTHIAETHA--EDNIYLPLLDHFSAREIS 122

Query: 127 NLTFAVAIINAWNRLGVSMR 146
           +LTFA+ ++N +NRL + MR
Sbjct: 123 DLTFAIGLMNCFNRLAIGMR 142


>Z3974 [S] COG2128 Uncharacterized conserved protein EcZ Escherichia coli
           O157:H7 EDL933
          Length = 143

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)

Query: 7   RLPHAKLAAPAFNALIKASEVVHQSGVDPKLLELVFLRVSQLNGCAFCVDMHSHDLLQKG 66
           R P+ +L+   +NAL++A   +  S +D  L+EL++LRVSQ+NGCAFC++MHS  L + G
Sbjct: 5   RQPYYELSPAVYNALVQAKTALENSTLDTTLMELIYLRVSQINGCAFCLEMHSKALRKSG 64

Query: 67  EDQQRLNTLAAWREIPFFTDAERAALNWAERFTHLHQQDADKEDAAFVQLQQHFNDTEIA 126
             Q +L+ LA WR    F + ERAAL WAE  T + +  A  ED  +  L +HF+  EI+
Sbjct: 65  VPQHKLDALAGWRVSHHFDERERAALAWAESVTDIARTHA--EDEVYQPLLEHFSAAEIS 122

Query: 127 NLTFAVAIINAWNRLGVSMR 146
           +LTFA+ ++N +NRL VSMR
Sbjct: 123 DLTFAIGLMNCFNRLAVSMR 142


>ECs3535 [S] COG2128 Uncharacterized conserved protein Ecs Escherichia coli
           O157:H7
          Length = 143

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)

Query: 7   RLPHAKLAAPAFNALIKASEVVHQSGVDPKLLELVFLRVSQLNGCAFCVDMHSHDLLQKG 66
           R P+ +L+   +NAL++A   +  S +D  L+EL++LRVSQ+NGCAFC++MHS  L + G
Sbjct: 5   RQPYYELSPAVYNALVQAKTALENSTLDTTLMELIYLRVSQINGCAFCLEMHSKALRKSG 64

Query: 67  EDQQRLNTLAAWREIPFFTDAERAALNWAERFTHLHQQDADKEDAAFVQLQQHFNDTEIA 126
             Q +L+ LA WR    F + ERAAL WAE  T + +  A  ED  +  L +HF+  EI+
Sbjct: 65  VPQHKLDALAGWRVSHHFDERERAALAWAESVTDIARTHA--EDEVYQPLLEHFSAAEIS 122

Query: 127 NLTFAVAIINAWNRLGVSMR 146
           +LTFA+ ++N +NRL VSMR
Sbjct: 123 DLTFAIGLMNCFNRLAVSMR 142


>SMc02239 [S] COG2128 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 153

 Score =  124 bits (312), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 85/147 (57%), Gaps = 2/147 (1%)

Query: 4   FKQRLPHAKLAAPAFNALIKASEVVHQSGVDPKLLELVFLRVSQLNGCAFCVDMHSHDLL 63
            + R+  AK A  A+ A+      V  SG++P+L+ L+ LR SQ+NGCA+CVDMH+ +  
Sbjct: 1   MQSRVNFAKAAPDAYKAVAALDSYVKGSGIEPRLIHLIKLRASQINGCAYCVDMHTKEAR 60

Query: 64  QKGEDQQRLNTLAAWREIPFFTDAERAALNWAERFTHLHQQDADKEDAAFVQLQQHFNDT 123
             G  QQ +N +  WRE P F + ERA L W E  T++ +  A   D A+  L+ HFN+ 
Sbjct: 61  HSGLSQQWINLVCVWRESPHFDERERAVLGWTEALTNVAETRA--PDDAYEALKAHFNEE 118

Query: 124 EIANLTFAVAIINAWNRLGVSMRPQVP 150
           E+  +T A+  IN WNRL V  R   P
Sbjct: 119 EMTKITVAIGAINVWNRLCVGFRALPP 145