BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0026.p         (45 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc2437 [E] COG0410 ABC-type branched-chain amino acid transport...    64   7e-11

>RSc2437 [E] COG0410 ABC-type branched-chain amino acid transport systems,
          ATPase component Rso Ralstonia solanacearum
          Length = 244

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 31/43 (72%), Positives = 36/43 (83%)

Query: 1  MTTNILKVQQLSVAYGGIQAVKGIDLEVNEGELVTLIGANGAG 43
          M   +LK+  L VAYGGIQAVKG+DLE+ +GELVTLIGANGAG
Sbjct: 7  MKQTVLKISGLKVAYGGIQAVKGVDLEIADGELVTLIGANGAG 49