BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0016.p (109 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value YPO2202 [R] COG2823 Predicted periplasmic or secreted lipoprotei... 107 9e-24 ECs5334 [R] COG2823 Predicted periplasmic or secreted lipoprotei... 71 8e-13 osmY [R] COG2823 Predicted periplasmic or secreted lipoprotein E... 71 8e-13 ZosmY [R] COG2823 Predicted periplasmic or secreted lipoprotein ... 70 8e-13 STM4561 [R] COG2823 Predicted periplasmic or secreted lipoprotei... 70 1e-12 >YPO2202 [R] COG2823 Predicted periplasmic or secreted lipoprotein Ype Yersinia pestis Length = 104 Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 1/104 (0%) Query: 6 MSLTKRFIGFFLALFM-VSLVGCASGPNKEGTGEYVDDAVITTKVKAAIFNEKDLKSTEI 64 M K F +A+ M +++ CA EGTG Y+DD V+TTKVKAA+ EK+LKSTEI Sbjct: 1 MKFFKTFSALCIAIIMAMAVSACAPTAKSEGTGGYLDDTVVTTKVKAALLGEKNLKSTEI 60 Query: 65 NVETYKGVVQLSGFVSSSTAAARATELARGVKGVVSVRNDLRLK 108 NVET+KG VQLSGFVSSS A RA ++ R V GV SV N + +K Sbjct: 61 NVETFKGRVQLSGFVSSSQDANRAVQVTRSVPGVKSVSNQMLIK 104 >ECs5334 [R] COG2823 Predicted periplasmic or secreted lipoprotein Ecs Escherichia coli O157:H7 Length = 201 Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 22/126 (17%) Query: 1 MSLTKMSLTKRFIGFFLALFMVSLV--GCASGPNKEGT----------------GEYVDD 42 M++T++ ++K LA+ + S V G A N T G ++DD Sbjct: 1 MTMTRLKISK----TLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDD 56 Query: 43 AVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATELARGVKGVVSVR 102 + IT KVKAA+ + ++KST+I+V+T + VV LSGFV S A A ++A+GV+GV SV Sbjct: 57 SAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVS 116 Query: 103 NDLRLK 108 + L ++ Sbjct: 117 DKLHVR 122 Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Query: 33 KEGTGE-YVDDAVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATEL 91 KEG+ + Y D T+++KA + + + S + VET GVVQLSG V S + RA + Sbjct: 125 KEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGIVDSQAQSDRAESI 184 Query: 92 ARGVKGVVSVRNDLRLK 108 A+ V GV SV+NDL+ K Sbjct: 185 AKAVDGVKSVKNDLKTK 201 >osmY [R] COG2823 Predicted periplasmic or secreted lipoprotein Eco Escherichia coli K12 Length = 201 Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 22/126 (17%) Query: 1 MSLTKMSLTKRFIGFFLALFMVSLV--GCASGPNKEGT----------------GEYVDD 42 M++T++ ++K LA+ + S V G A N T G ++DD Sbjct: 1 MTMTRLKISK----TLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDD 56 Query: 43 AVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATELARGVKGVVSVR 102 + IT KVKAA+ + ++KST+I+V+T + VV LSGFV S A A ++A+GV+GV SV Sbjct: 57 SAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVS 116 Query: 103 NDLRLK 108 + L ++ Sbjct: 117 DKLHVR 122 Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 1/77 (1%) Query: 33 KEGTGE-YVDDAVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATEL 91 KEG+ + Y D T+++KA + + + S + VET GVVQLSG V S + RA + Sbjct: 125 KEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESI 184 Query: 92 ARGVKGVVSVRNDLRLK 108 A+ V GV SV+NDL+ K Sbjct: 185 AKAVDGVKSVKNDLKTK 201 >ZosmY [R] COG2823 Predicted periplasmic or secreted lipoprotein EcZ Escherichia coli O157:H7 EDL933 Length = 201 Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 22/126 (17%) Query: 1 MSLTKMSLTKRFIGFFLALFMVSLV--GCASGPNKEGT----------------GEYVDD 42 M++T++ ++K LA+ + S V G A N T G ++DD Sbjct: 1 MTMTRLKISK----TLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDD 56 Query: 43 AVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATELARGVKGVVSVR 102 + IT KVKAA+ + ++KST+I+V+T + VV LSGFV S A A ++A+GV+GV SV Sbjct: 57 SAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVS 116 Query: 103 NDLRLK 108 + L ++ Sbjct: 117 DKLHVR 122 Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Query: 33 KEGTGE-YVDDAVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATEL 91 KEG+ + Y D T+++KA + + + S + VET GVVQLSG V S + RA + Sbjct: 125 KEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGIVDSQAQSDRAESI 184 Query: 92 ARGVKGVVSVRNDLRLK 108 A+ V GV SV NDL+ K Sbjct: 185 AKAVDGVKSVXNDLKTK 201 >STM4561 [R] COG2823 Predicted periplasmic or secreted lipoprotein Sty Salmonella typhimurium LT2 Length = 205 Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/72 (48%), Positives = 52/72 (72%) Query: 37 GEYVDDAVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATELARGVK 96 G ++DD+ IT KVKAA+ + ++KST+I+VET + VV LSGFV S A A ++A+GV+ Sbjct: 55 GNFMDDSAITAKVKAALVDHDNIKSTDISVETNQKVVTLSGFVESQAQAEAAVKVAKGVE 114 Query: 97 GVVSVRNDLRLK 108 GV SV + L ++ Sbjct: 115 GVTSVSDKLHVR 126 Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 32 NKEGTGE-YVDDAVITTKVKAAIFNEKDLKSTEINVETYKGVVQLSGFVSSSTAAARATE 90 NKEG+ + Y D T++VKA + + + S ++ VET GVVQLSG V + + RA Sbjct: 128 NKEGSVKGYAGDTATTSEVKAKLLADDLVPSRKVKVETTDGVVQLSGTVETQEQSDRAES 187 Query: 91 LARGVKGVVSVRNDLRLK 108 +A+ V GV SV+NDL+++ Sbjct: 188 IAKAVDGVKSVKNDLKVQ 205