BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0038.p (320 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2083 [S] COG2908 Uncharacterized protein conserved in bacteri... 355 6e-98 CC3344 Non COG 308 9e-84 PA3219 [S] COG2908 Uncharacterized protein conserved in bacteria... 284 2e-76 mll0806 [S] COG2908 Uncharacterized protein conserved in bacteri... 266 3e-71 SMc00171 [S] COG2908 Uncharacterized protein conserved in bacter... 263 3e-70 >RSc2083 [S] COG2908 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 314 Score = 355 bits (912), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 164/255 (64%), Positives = 205/255 (80%), Gaps = 5/255 (1%) Query: 28 EAKRDP-----LRFRTIWISDIHLGTTGCQAERLLEFLRATESDTLYLVGDIIDGWQLKR 82 +A DP R+R IW+SDIHLGT+GCQA+ LL+FL+ SDTLYLVGDI+DGWQL+R Sbjct: 43 QADTDPPAEKVHRYRAIWLSDIHLGTSGCQADFLLDFLKHNASDTLYLVGDIVDGWQLRR 102 Query: 83 RWYWDQSHNNVVQTVLKKAKKGTNVIFVPGNHDEVIRQFIDLDFGGIKIRDELVHVTAEG 142 WYW Q+HN+VVQ VL++A+KGT V+F+PGNHDE+ RQF L+FG I++ ++ +HVTA G Sbjct: 103 GWYWPQAHNDVVQKVLRRARKGTRVVFIPGNHDEMARQFHGLNFGDIEVAEDAIHVTATG 162 Query: 143 KRMLVLHGDRFDGVIACAKWLAYVGDTLYTMILKFNQWFNSWRARAGLPYWSLSQYLKSK 202 KR+ V+HGD FDGV+ A+WLAYVGDTLYT+IL N+ FN R R G PYWSLSQYLK + Sbjct: 163 KRLWVVHGDLFDGVMQHARWLAYVGDTLYTLILAMNRHFNRIRVRLGFPYWSLSQYLKHQ 222 Query: 203 VKNAVNYISSFEDALADEARKKGLDGVICGHIHKAEIRDIGGVTYCNDGDWVESLSALVE 262 VKNAVNYI+SFE + DEAR++G DGV+CGHIHKAEIR+I G YCNDGDWVESLSALVE Sbjct: 223 VKNAVNYINSFERVMTDEARRRGCDGVVCGHIHKAEIREINGQLYCNDGDWVESLSALVE 282 Query: 263 EPSGQLRLVSWQEIM 277 G+L++V W ++ Sbjct: 283 TMEGELQIVYWTHLL 297 >CC3344 Non COG Length = 281 Score = 308 bits (790), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 141/242 (58%), Positives = 184/242 (76%) Query: 35 RFRTIWISDIHLGTTGCQAERLLEFLRATESDTLYLVGDIIDGWQLKRRWYWDQSHNNVV 94 +R ++ISD+HLGT GCQAE LL+F+R E D LYLVGDIIDGW+L+ W+W Q+HN+VV Sbjct: 9 HYRAVFISDLHLGTRGCQAELLLDFIRHIECDKLYLVGDIIDGWKLRGGWHWPQTHNDVV 68 Query: 95 QTVLKKAKKGTNVIFVPGNHDEVIRQFIDLDFGGIKIRDELVHVTAEGKRMLVLHGDRFD 154 Q +L+ A+KGT VI+VPGNHD+ +R+F + FGG+ + +++H TA+GKR LV+HGD FD Sbjct: 69 QKILRMARKGTEVIYVPGNHDDGVREFCGVHFGGVVVARDVIHETADGKRYLVVHGDEFD 128 Query: 155 GVIACAKWLAYVGDTLYTMILKFNQWFNSWRARAGLPYWSLSQYLKSKVKNAVNYISSFE 214 GV+ AKWLA++GD Y IL N N R R G YWS S YLK KVKNA+ +I +FE Sbjct: 129 GVVQHAKWLAFLGDWSYRTILMLNTLVNRLRRRLGFGYWSFSAYLKVKVKNALQFIENFE 188 Query: 215 DALADEARKKGLDGVICGHIHKAEIRDIGGVTYCNDGDWVESLSALVEEPSGQLRLVSWQ 274 A+ADEAR++G+DGVICGHIHKAE+RDI G+ Y NDGDWVES +AL E G+L +V W Sbjct: 189 AAVADEARRRGVDGVICGHIHKAEMRDIDGIHYVNDGDWVESCTALAEHADGRLEIVEWA 248 Query: 275 EI 276 ++ Sbjct: 249 KV 250 >PA3219 [S] COG2908 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 270 Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 132/236 (55%), Positives = 172/236 (72%) Query: 35 RFRTIWISDIHLGTTGCQAERLLEFLRATESDTLYLVGDIIDGWQLKRRWYWDQSHNNVV 94 R RT+WISD+HLGT CQAE L FL+ +D +YLVGDIIDGW+L+ YW Q+H NV+ Sbjct: 14 RVRTLWISDVHLGTRDCQAEHLAAFLKRYHADRIYLVGDIIDGWKLRGGIYWPQAHTNVI 73 Query: 95 QTVLKKAKKGTNVIFVPGNHDEVIRQFIDLDFGGIKIRDELVHVTAEGKRMLVLHGDRFD 154 + +L +K+GT VI+V GNHDE +R++ L G I++ DE VH TA+G+++LV+HGD+FD Sbjct: 74 RRLLTLSKRGTEVIYVTGNHDEFLRRYSSLILGNIRLVDEAVHSTADGRKLLVIHGDQFD 133 Query: 155 GVIACAKWLAYVGDTLYTMILKFNQWFNSWRARAGLPYWSLSQYLKSKVKNAVNYISSFE 214 + +WLA++GD+ Y L N+W N WR R G YWSLS YLK KVK AVN+IS FE Sbjct: 134 VITRYHRWLAFLGDSAYEFTLLLNRWLNHWRRRWGYGYWSLSAYLKHKVKTAVNFISDFE 193 Query: 215 DALADEARKKGLDGVICGHIHKAEIRDIGGVTYCNDGDWVESLSALVEEPSGQLRL 270 +A+A E K+GLDGV+CGHIH AEIR I GV Y N GDWVES +AL+E G ++L Sbjct: 194 EAIAHECHKRGLDGVVCGHIHHAEIRRIEGVDYLNCGDWVESCTALIEHWDGSIQL 249 >mll0806 [S] COG2908 Uncharacterized protein conserved in bacteria Mlo Mesorhizobium loti Length = 260 Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 119/239 (49%), Positives = 171/239 (71%) Query: 39 IWISDIHLGTTGCQAERLLEFLRATESDTLYLVGDIIDGWQLKRRWYWDQSHNNVVQTVL 98 ++ISD+HLG+ +A+ L++FLR ++D +YLVGDI+DGW+L+R W+W QSHN+VVQ +L Sbjct: 1 MFISDVHLGSKAAKADFLIDFLRYHDADIIYLVGDIVDGWRLRRSWHWPQSHNDVVQKLL 60 Query: 99 KKAKKGTNVIFVPGNHDEVIRQFIDLDFGGIKIRDELVHVTAEGKRMLVLHGDRFDGVIA 158 +KA+KG ++ ++ GNHDE RQF + FGGI + D +H TA+GKR+LV+HGD+FD V+ Sbjct: 61 RKARKGASITYIAGNHDEFARQFQGVHFGGIVVADRAIHETADGKRLLVIHGDQFDTVVH 120 Query: 159 CAKWLAYVGDTLYTMILKFNQWFNSWRARAGLPYWSLSQYLKSKVKNAVNYISSFEDALA 218 +WLAY+GD Y + N+ R GLPYWS S + K KVK AVN+I SF+ L Sbjct: 121 NQRWLAYLGDHAYDAAMIVNRVVTRLRQLLGLPYWSFSSWAKVKVKKAVNFIGSFQTVLT 180 Query: 219 DEARKKGLDGVICGHIHKAEIRDIGGVTYCNDGDWVESLSALVEEPSGQLRLVSWQEIM 277 +EAR+ +DGVICGHIH A I + V Y N GDWVES +A+VE G++ +++W +++ Sbjct: 181 EEARRSHVDGVICGHIHHAAIENFDDVRYINTGDWVESCTAVVEHFDGRMEILTWAQVL 239 >SMc00171 [S] COG2908 Uncharacterized protein conserved in bacteria Sme Sinorhizobium meliloti Length = 281 Score = 263 bits (673), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 126/267 (47%), Positives = 178/267 (66%), Gaps = 1/267 (0%) Query: 24 AGDEEAKRDPLR-FRTIWISDIHLGTTGCQAERLLEFLRATESDTLYLVGDIIDGWQLKR 82 A ++D +R RT++ISD+HLG+ + + LL+FLR E++T+ LVGDI+DGW+LKR Sbjct: 2 AAASAPQQDSVRKLRTLFISDVHLGSKAAKTDFLLDFLRHHEAETIILVGDIVDGWRLKR 61 Query: 83 RWYWDQSHNNVVQTVLKKAKKGTNVIFVPGNHDEVIRQFIDLDFGGIKIRDELVHVTAEG 142 WYW QS N+VVQ +L+KA+KGT +I++PGNHDE +R F + FGGI++ +H A+G Sbjct: 62 SWYWPQSCNDVVQKLLRKARKGTRIIYIPGNHDEFLRDFPGVHFGGIEVAQRYLHKGADG 121 Query: 143 KRMLVLHGDRFDGVIACAKWLAYVGDTLYTMILKFNQWFNSWRARAGLPYWSLSQYLKSK 202 + LVLHGD FD V+ A+ LAY+GD Y M + N + R R +PYWS S + K + Sbjct: 122 RTYLVLHGDEFDVVVRNARVLAYLGDWAYDMAIAINIGLAAIRRRLDMPYWSFSSWAKLQ 181 Query: 203 VKNAVNYISSFEDALADEARKKGLDGVICGHIHKAEIRDIGGVTYCNDGDWVESLSALVE 262 VK+AVN+I F+ + +EAR+ GVICGHIH A I DI G+ Y N GDWVES +A+ E Sbjct: 182 VKHAVNFIGEFQKVVTEEARRHDAQGVICGHIHHAVIEDIDGIRYINTGDWVESCTAIAE 241 Query: 263 EPSGQLRLVSWQEIMQLKRAGKEARTA 289 G + L++W ++ AG+ A A Sbjct: 242 HHDGTMELITWHQMRGDTAAGQRAGEA 268