BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0008.p (250 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0730 [R] COG4221 Short-chain alcohol dehydrogenase of unknown... 333 2e-91 STM1511 [R] COG4221 Short-chain alcohol dehydrogenase of unknown... 328 7e-90 ZydfG [R] COG4221 Short-chain alcohol dehydrogenase of unknown s... 323 3e-88 ECs2148 [R] COG4221 Short-chain alcohol dehydrogenase of unknown... 323 3e-88 ydfG [R] COG4221 Short-chain alcohol dehydrogenase of unknown sp... 323 3e-88 >RSc0730 [R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity Rso Ralstonia solanacearum Length = 262 Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 160/248 (64%), Positives = 191/248 (77%), Gaps = 1/248 (0%) Query: 1 MVVLITGATAGFGAAMARKFAGNGHKVIAAGRRKERLDDLVKELGADKVLPLVLDVTSKS 60 M+V +TGATAGFGAA+AR+F GH+VIAAGRR++RLD L ELG D +LP +LDV + Sbjct: 13 MIVFVTGATAGFGAAVARRFVREGHRVIAAGRRQDRLDALKAELG-DALLPFLLDVQDAA 71 Query: 61 SIETGLASLTGAWKEVDVLINNAGLALGLGPAHEVALSDWETMIDTNVKGLVTITHALLP 120 ++ +L W+EVDVL+NNAGLALGL PAH +LSDW+ MI TNV GLV +T ALLP Sbjct: 72 AVAALPGALPEGWREVDVLVNNAGLALGLEPAHRASLSDWDLMIGTNVTGLVHVTRALLP 131 Query: 121 DMVKRGRGTIINLGSVAGAYPYPGGNVYGATKAFVDQFTLNLRADLVGTGVRATNLAPGL 180 MV R RG +INLGS+AG YPYPGGNVYG TKAFV QF+LNLRADL GT VR +N+ PGL Sbjct: 132 GMVARNRGHVINLGSIAGTYPYPGGNVYGGTKAFVRQFSLNLRADLTGTRVRVSNVEPGL 191 Query: 181 CGGTEFSNVRFKGDDGAAAKVYEGTTPLTADDIAEAAFWVATMPAHVNINYMELMPTCQG 240 C GTEFSNVRFKGDD KVYEGT LTADDIAE +W+A +PAH N+N +E+MP CQ Sbjct: 192 CSGTEFSNVRFKGDDARVTKVYEGTEALTADDIAETIYWMAALPAHFNVNAIEIMPVCQS 251 Query: 241 FSPFNIKR 248 FS ++ R Sbjct: 252 FSATSVTR 259 >STM1511 [R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity Sty Salmonella typhimurium LT2 Length = 248 Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 157/248 (63%), Positives = 193/248 (77%), Gaps = 1/248 (0%) Query: 1 MVVLITGATAGFGAAMARKFAGNGHKVIAAGRRKERLDDLVKELGADKVLPLVLDVTSKS 60 M+VL+TGATAGFG +AR+F NGHKVIA GRR ERL L ELG + VL LDV +++ Sbjct: 1 MIVLVTGATAGFGECIARRFVENGHKVIATGRRHERLQALKDELG-ENVLTAQLDVRNRA 59 Query: 61 SIETGLASLTGAWKEVDVLINNAGLALGLGPAHEVALSDWETMIDTNVKGLVTITHALLP 120 +IE +ASL W+++DVL+NNAGLALGL PAH+ ++ DWETMIDTN KGL+ +T A+LP Sbjct: 60 AIEEMMASLPAQWRDIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLIYMTRAVLP 119 Query: 121 DMVKRGRGTIINLGSVAGAYPYPGGNVYGATKAFVDQFTLNLRADLVGTGVRATNLAPGL 180 MV+R RG IIN+GS AG++PY GGNVYGATKAFV QF+LNLR DL GT VR T++ PGL Sbjct: 120 GMVERNRGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL 179 Query: 181 CGGTEFSNVRFKGDDGAAAKVYEGTTPLTADDIAEAAFWVATMPAHVNINYMELMPTCQG 240 GGTEFS+VRFKGDD A K YE TT LT +DI EA +WVAT+PAHVNIN +E+MP Q Sbjct: 180 VGGTEFSSVRFKGDDEKAGKTYENTTALTPEDITEAVWWVATLPAHVNINTVEMMPVTQS 239 Query: 241 FSPFNIKR 248 F+ ++ R Sbjct: 240 FAGLSVHR 247 >ZydfG [R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity EcZ Escherichia coli O157:H7 EDL933 Length = 248 Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 1/249 (0%) Query: 1 MVVLITGATAGFGAAMARKFAGNGHKVIAAGRRKERLDDLVKELGADKVLPLVLDVTSKS 60 M+VL+TGATAGFG + R+F GHKVIA GRR+ERL +L ELG D + LDV +++ Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRA 59 Query: 61 SIETGLASLTGAWKEVDVLINNAGLALGLGPAHEVALSDWETMIDTNVKGLVTITHALLP 120 +IE LASL W +D+L+NNAGLALG+ PAH+ ++ DWETMIDTN KGLV +T A+LP Sbjct: 60 AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASIEDWETMIDTNNKGLVYMTRAVLP 119 Query: 121 DMVKRGRGTIINLGSVAGAYPYPGGNVYGATKAFVDQFTLNLRADLVGTGVRATNLAPGL 180 MV+R G IIN+GS AG++PY GGNVYGATKAFV QF+LNLR DL GT VR T++ PGL Sbjct: 120 GMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL 179 Query: 181 CGGTEFSNVRFKGDDGAAAKVYEGTTPLTADDIAEAAFWVATMPAHVNINYMELMPTCQG 240 GGTEFSNVRFKGDDG A K Y+ T LT +D++EA +WV+T+PAHVNIN +E+MP Q Sbjct: 180 VGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQS 239 Query: 241 FSPFNIKRK 249 ++ N+ R+ Sbjct: 240 YAGLNVHRQ 248 >ECs2148 [R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity Ecs Escherichia coli O157:H7 Length = 248 Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 1/249 (0%) Query: 1 MVVLITGATAGFGAAMARKFAGNGHKVIAAGRRKERLDDLVKELGADKVLPLVLDVTSKS 60 M+VL+TGATAGFG + R+F GHKVIA GRR+ERL +L ELG D + LDV +++ Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRA 59 Query: 61 SIETGLASLTGAWKEVDVLINNAGLALGLGPAHEVALSDWETMIDTNVKGLVTITHALLP 120 +IE LASL W +D+L+NNAGLALG+ PAH+ ++ DWETMIDTN KGLV +T A+LP Sbjct: 60 AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASIEDWETMIDTNNKGLVYMTRAVLP 119 Query: 121 DMVKRGRGTIINLGSVAGAYPYPGGNVYGATKAFVDQFTLNLRADLVGTGVRATNLAPGL 180 MV+R G IIN+GS AG++PY GGNVYGATKAFV QF+LNLR DL GT VR T++ PGL Sbjct: 120 GMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL 179 Query: 181 CGGTEFSNVRFKGDDGAAAKVYEGTTPLTADDIAEAAFWVATMPAHVNINYMELMPTCQG 240 GGTEFSNVRFKGDDG A K Y+ T LT +D++EA +WV+T+PAHVNIN +E+MP Q Sbjct: 180 VGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQS 239 Query: 241 FSPFNIKRK 249 ++ N+ R+ Sbjct: 240 YAGLNVHRQ 248 >ydfG [R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity Eco Escherichia coli K12 Length = 248 Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 151/249 (60%), Positives = 191/249 (76%), Gaps = 1/249 (0%) Query: 1 MVVLITGATAGFGAAMARKFAGNGHKVIAAGRRKERLDDLVKELGADKVLPLVLDVTSKS 60 M+VL+TGATAGFG + R+F GHKVIA GRR+ERL +L ELG D + LDV +++ Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRA 59 Query: 61 SIETGLASLTGAWKEVDVLINNAGLALGLGPAHEVALSDWETMIDTNVKGLVTITHALLP 120 +IE LASL W +D+L+NNAGLALG+ PAH+ ++ DWETMIDTN KGLV +T A+LP Sbjct: 60 AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 Query: 121 DMVKRGRGTIINLGSVAGAYPYPGGNVYGATKAFVDQFTLNLRADLVGTGVRATNLAPGL 180 MV+R G IIN+GS AG++PY GGNVYGATKAFV QF+LNLR DL GT VR T++ PGL Sbjct: 120 GMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGL 179 Query: 181 CGGTEFSNVRFKGDDGAAAKVYEGTTPLTADDIAEAAFWVATMPAHVNINYMELMPTCQG 240 GGTEFSNVRFKGDDG A K Y+ T LT +D++EA +WV+T+PAHVNIN +E+MP Q Sbjct: 180 VGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQS 239 Query: 241 FSPFNIKRK 249 ++ N+ R+ Sbjct: 240 YAGLNVHRQ 248