BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0001.p (189 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0737 [S] COG1729 Uncharacterized protein conserved in bacteri... 189 3e-48 XF1895 [S] COG1729 Uncharacterized protein conserved in bacteria... 106 3e-23 PA0974 [S] COG1729 Uncharacterized protein conserved in bacteria... 80 3e-15 ZybgF [S] COG1729 Uncharacterized protein conserved in bacteria ... 76 4e-14 ECs0777 [S] COG1729 Uncharacterized protein conserved in bacteri... 76 4e-14 >RSc0737 [S] COG1729 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 274 Score = 189 bits (480), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 92/181 (50%), Positives = 127/181 (70%) Query: 9 DNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSE 68 + L+S++A LRGQ E L NE+ ++QKD+Y DLDARL+K EPQQ VDG+ V E Sbjct: 94 ETLKSEVARLRGQNEQLQNEVDTLARQQKDYYADLDARLKKFEPQQATVDGREGMVQPGE 153 Query: 69 QQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAAQ 128 + YDAAL F+ GD+KGA N F+ F+K+YPQS Y P AQ+W GN+LYAQRDYKG+ Sbjct: 154 KTEYDAALKTFQSGDFKGAGNQFSAFVKKYPQSPYLPLAQFWLGNALYAQRDYKGSTYVL 213 Query: 129 QVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKERMASL 188 + + + P +PKA +ALL +A++Q E KAAA+KTLE +IA+YP T A+T R+ ++ Sbjct: 214 ENMARANPQHPKAPEALLQVATNQGESGQKAAARKTLETVIAEYPGTEQAKTATSRLKTM 273 Query: 189 K 189 + Sbjct: 274 R 274 >XF1895 [S] COG1729 Uncharacterized protein conserved in bacteria Xfa Xylella fastidiosa 9a5c Length = 271 Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 32/220 (14%) Query: 2 LTLSDRNDNLQSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLE------PQQV 55 + L ++ ++L+SQI ++G IE + + +Q+ KD Y+DLD+RL+ +E P +V Sbjct: 46 IDLINQINDLRSQIRQMQGSIEEMQHGYEQLKQQSKDQYLDLDSRLKPIESGSVKEPSRV 105 Query: 56 ------------------------QVDGQTVAVGVS--EQQAYDAALSQFKGGDYKGAAN 89 + G A+ +S E+ AY+ A K Y AA Sbjct: 106 LANPISQVSPSHFNQPIAMSEQSPNIHGDASALTISNEERIAYNVAFDALKNSKYADAAE 165 Query: 90 AFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAAQQVVVKNYPDNPKAADALLNIA 149 F FL+ YP Y P+A YW G S YA D+ A A + ++ YP + KA+ +LL A Sbjct: 166 LFLSFLQLYPNGVYTPNALYWLGESYYAMHDFVSAEAQFRSLLSRYPTHDKASGSLLKEA 225 Query: 150 SSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKERMASLK 189 QA A+ +LEQ++++YP T AA+ +ER+ S+K Sbjct: 226 LCQANQGKNDDAQHSLEQVLSQYPGTDAARLAQERLQSIK 265 >PA0974 [S] COG1729 Uncharacterized protein conserved in bacteria Pae Pseudomonas aeruginosa Length = 274 Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/122 (37%), Positives = 70/122 (57%) Query: 68 EQQAYDAALSQFKGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAA 127 E+ YDAA K D+ A+ AF FL++YP S Y+ +AQYW G A+ D +GA A Sbjct: 153 EKLYYDAAFDLIKSKDFDKASQAFNAFLRKYPNSQYSGNAQYWLGEVNLAKGDLQGAGQA 212 Query: 128 QQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKERMAS 187 V ++YP + K D+L +A + L + AK L+Q+I++YP T AAQ + + + Sbjct: 213 FARVSQSYPSSQKVPDSLYKLADVERRLGNNDKAKGILQQVISQYPGTSAAQLAQRDLKN 272 Query: 188 LK 189 L+ Sbjct: 273 LR 274 >ZybgF [S] COG1729 Uncharacterized protein conserved in bacteria EcZ Escherichia coli O157:H7 EDL933 Length = 263 Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 22/198 (11%) Query: 12 QSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSEQQA 71 QS I +LRGQI+ ++ +RQK + +D+ Q Q+ A + A Sbjct: 67 QSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSGDQSGAAASTTPTA 126 Query: 72 YDAALSQ----FKGGDYKGAANA-----------------FADFLKRYPQSGYAPSAQYW 110 DA + K GD NA F +F+K YP S Y P+A YW Sbjct: 127 -DAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYW 185 Query: 111 QGNSLYAQRDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIA 170 G Y + A VVKNYP +PKAADA+ + + D A AK +Q+I+ Sbjct: 186 LGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVIS 245 Query: 171 KYPNTPAAQTGKERMASL 188 KYP T A+ ++R+ ++ Sbjct: 246 KYPGTDGAKQAQKRLNAM 263 >ECs0777 [S] COG1729 Uncharacterized protein conserved in bacteria Ecs Escherichia coli O157:H7 Length = 263 Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 22/198 (11%) Query: 12 QSQIAALRGQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSEQQA 71 QS I +LRGQI+ ++ +RQK + +D+ Q Q+ A + A Sbjct: 67 QSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSGGAAAQSTSGDQSGAAASTTPTA 126 Query: 72 YDAALSQ----FKGGDYKGAANA-----------------FADFLKRYPQSGYAPSAQYW 110 DA + K GD NA F +F+K YP S Y P+A YW Sbjct: 127 -DAGTANAGAPVKSGDANTDYNAAIALVQDKSRQDDAMVAFQNFIKNYPDSTYLPNANYW 185 Query: 111 QGNSLYAQRDYKGAIAAQQVVVKNYPDNPKAADALLNIASSQAELKDKAAAKKTLEQLIA 170 G Y + A VVKNYP +PKAADA+ + + D A AK +Q+I+ Sbjct: 186 LGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMFKVGVIMQDKGDTAKAKAVYQQVIS 245 Query: 171 KYPNTPAAQTGKERMASL 188 KYP T A+ ++R+ ++ Sbjct: 246 KYPGTDGAKQAQKRLNAM 263