BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0034.p (265 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc2103 [ET] COG0834 ABC-type amino acid transport/signal transd... 268 6e-72 AGc2566 [ET] COG0834 ABC-type amino acid transport/signal transd... 261 9e-70 YPO3257 [ET] COG0834 ABC-type amino acid transport/signal transd... 239 5e-63 mlr4897 [ET] COG0834 ABC-type amino acid transport/signal transd... 176 5e-44 SMa0082 [ET] COG0834 ABC-type amino acid transport/signal transd... 172 8e-43 >RSc2103 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Rso Ralstonia solanacearum Length = 267 Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 129/241 (53%), Positives = 174/241 (72%) Query: 20 HPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVARLVAKGMGVKAELVP 79 PA AD LA+IQKAGV+++ +P DF P+GS+ +DL+LQG DID+A LVAK +GVKAELVP Sbjct: 27 RPAHADALANIQKAGVIRVAIPNDFPPFGSLGTDLKLQGYDIDMANLVAKELGVKAELVP 86 Query: 80 VPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNSVFGVAAIKVAGPADLA 139 V ++R+ FL T K+D++IS+LGKNAER KVIDF+Q YAP+ SV+G + + PADLA Sbjct: 87 VTSTNRIPFLTTGKVDVVISSLGKNAERAKVIDFTQAYAPFPKSVYGPKDVSIKTPADLA 146 Query: 140 NQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLIAAYVSGQVQLVGTGDFVAYALAEK 199 +T+GV R + EDL LT P S IKRYEDNN +Y+ GQVQLV G+ VA A+ E+ Sbjct: 147 GKTIGVTRGSTEDLALTAVAPASATIKRYEDNNATAQSYLIGQVQLVTLGNIVANAVNER 206 Query: 200 TPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTASKKSGELNGIVKKWLNVPLPEK 259 T + +K+ + + CYVG+ KGEPAL+ KVN A+T K G LN + ++W+ +PLP K Sbjct: 207 TRLRQLDVKFPVEDTPCYVGVAKGEPALLEKVNAAITKLKSDGRLNDLSQRWIKMPLPAK 266 Query: 260 I 260 + Sbjct: 267 L 267 >AGc2566 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 261 Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 126/254 (49%), Positives = 172/254 (67%), Gaps = 4/254 (1%) Query: 7 AIAASLGLMAVAVHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLDIDVARL 66 A++ +LG A AD L DI G +++ VPQDF P+GSV +D+ QG DIDVA L Sbjct: 12 AVSVTLGFSPAA----FADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYDIDVANL 67 Query: 67 VAKGMGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPYNNSVFG 126 + + +GVK ELVPV ++R+ +LQT+K+DL+IS+LGKN +REKVIDFS YAP+ N VF Sbjct: 68 IGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPFFNGVFA 127 Query: 127 VAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLIAAYVSGQVQLV 186 ++ VA DL+ +T+GV R EDL LT P T IKRYEDNNG I+A+++GQV+ V Sbjct: 128 PDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAFLAGQVEAV 187 Query: 187 GTGDFVAYALAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTASKKSGELNG 246 TG+ VA A+ K P +P LK++I S CY+G+NK +PAL+ KVN + +K G LN Sbjct: 188 ATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAKTDGSLNT 247 Query: 247 IVKKWLNVPLPEKI 260 I +KWL LP+ + Sbjct: 248 IAQKWLKTDLPKDL 261 >YPO3257 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Ype Yersinia pestis Length = 262 Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 117/257 (45%), Positives = 169/257 (65%) Query: 1 MNFIKTAIAASLGLMAVAVHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGLD 60 MN K + L+ V +AD L IQ+ GV+++ VPQDF P+GSV +DLQ QG D Sbjct: 1 MNIKKRMLWLWAVLVLVQAPAVLADQLEKIQQRGVLRVAVPQDFPPFGSVGTDLQPQGYD 60 Query: 61 IDVARLVAKGMGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAPY 120 ID+A+ +A M +K +LV V ++R+ +LQT K+DL+IS+LGKN EREK I FS+ YAP+ Sbjct: 61 IDMAQYLADKMKLKLQLVSVTSANRVPYLQTDKVDLVISSLGKNPEREKAIAFSRAYAPF 120 Query: 121 NNSVFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLIAAYVS 180 VFG ++ P LA +T+GV R ED++L++ PK+ I+RYEDNN ++AY+S Sbjct: 121 FLGVFGAKDDELKQPEQLAGKTIGVTRGAVEDMVLSEIAPKAAQIRRYEDNNTTLSAYLS 180 Query: 181 GQVQLVGTGDFVAYALAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTASKK 240 GQV + TG+ V ALA + P P+ K+++ S CY+G+ +GEPAL AKV+ + + + Sbjct: 181 GQVNYLATGNLVISALARQNPKQAPVAKFMLKDSPCYIGLRQGEPALKAKVDALIGDALQ 240 Query: 241 SGELNGIVKKWLNVPLP 257 LNG+ +KWL PLP Sbjct: 241 DNTLNGLSEKWLKAPLP 257 >mlr4897 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Mlo Mesorhizobium loti Length = 269 Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/257 (40%), Positives = 157/257 (61%), Gaps = 5/257 (1%) Query: 4 IKTAIAASLGL----MAVAVHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQGL 59 +K++IAA L L + +A A AD LADI KAG + +GV DF P+ S ++D+ L+G Sbjct: 7 LKSSIAAILVLGAAGLGIATQAANADALADITKAGTINVGVFADFPPFSSASADMSLKGY 66 Query: 60 DIDVARLVAKGMGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYAP 119 D+DVA+ +A + VK V V +R+ +L H++D+++S +G + ERE+VIDF+ YAP Sbjct: 67 DMDVAQYIADTLKVKLNPVAVTGQNRIPYLNDHRVDILMS-VGYSKEREQVIDFAAAYAP 125 Query: 120 YNNSVFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLIAAYV 179 Y +V G AA+ V G DLA++++ V R T ED LT++ P S IKR+++ N +I A++ Sbjct: 126 YYIAVIGPAAMSVKGKEDLADKSIAVNRGTLEDTSLTEAAPASADIKRFDNYNSVIQAFI 185 Query: 180 SGQVQLVGTGDFVAYALAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTASK 239 SGQ QL+ G+ V + K KP K+ + S ++G+NK E L VN+A+ Sbjct: 186 SGQTQLMVVGNDVGAQVLAKQDVLKPEQKFQLLTSPSHIGLNKNEDGLKKAVNDAIAKML 245 Query: 240 KSGELNGIVKKWLNVPL 256 G+L+ K WL PL Sbjct: 246 ADGKLDESSKAWLKTPL 262 >SMa0082 [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain Sme Sinorhizobium meliloti Length = 271 Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 99/260 (38%), Positives = 153/260 (58%), Gaps = 3/260 (1%) Query: 1 MNFIKTAIAASLGLMAVA--VHPAMADTLADIQKAGVVKIGVPQDFAPYGSVTSDLQLQG 58 MN + + LG VA V PA A T+ I+ AG VK+G+ DF P+G + ++ Q G Sbjct: 7 MNISRRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDG 66 Query: 59 LDIDVARLVAKGMGVKAELVPVPISSRMAFLQTHKIDLIISTLGKNAEREKVIDFSQGYA 118 D DVA+L+AK +GV+ +VPV +R+ +LQ++++DL++++LG ER K +DFSQ YA Sbjct: 67 YDADVAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPYA 126 Query: 119 PYNNSVFGVAAIKVAGPADLANQTVGVARSTFEDLMLTDSVPKSTVIKRYEDNNGLIAAY 178 + VFG A + V P DLA +T+GVAR++ +D T P+ I+R++D+ + A Sbjct: 127 GISIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQDANIQRFDDDASAVQAL 186 Query: 179 VSGQVQLVGTGDFVAYALAEKTPANKPLLKYIINVSTCYVGMNKGEPALMAKVNEALTAS 238 +SGQV+L+G + VA + P + K ++ + + KG ++ VN L Sbjct: 187 LSGQVELIGVSNVVAAQIEAAAPG-RFNQKLQLSQQVQGIAVRKGSSEMLKFVNGFLDKV 245 Query: 239 KKSGELNGIVKKWLNVPLPE 258 K G+LN I +KWL PLPE Sbjct: 246 KADGQLNAIHEKWLGSPLPE 265