BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0017.p         (82 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1339 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet...   101   4e-22
PA2356 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetr...    96   2e-20
YPO3625 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet...    96   2e-20
ycbN [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrah...    91   9e-19
mlr5216 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tet...    90   1e-18

>RSc1339 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene
           tetrahydromethanopterin reductase and related
           flavin-dependent oxidoreductases Rso Ralstonia
           solanacearum
          Length = 387

 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 53/58 (91%)

Query: 1   VGLVRGGAGTSLVGDAATVAERLQEYADLGVDTFVLSGYPHLEEAIRFAELVFPLLGK 58
           VGLVRGGAGT+LVGD  TVA R++EYADLG+DTFVLSGYPHLEEA RFAELVFPLL +
Sbjct: 300 VGLVRGGAGTALVGDPHTVAARMREYADLGIDTFVLSGYPHLEEAYRFAELVFPLLPR 357


>PA2356 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene
           tetrahydromethanopterin reductase and related
           flavin-dependent oxidoreductases Pae Pseudomonas
           aeruginosa
          Length = 381

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 55/69 (79%)

Query: 1   VGLVRGGAGTSLVGDAATVAERLQEYADLGVDTFVLSGYPHLEEAIRFAELVFPLLGKNA 60
           VGLVRGGAGT+LVGD   VAER+ EYA+LG+D+F+ SGYPHLEEA RFAELVFPLL +  
Sbjct: 292 VGLVRGGAGTALVGDPRQVAERIGEYAELGIDSFIFSGYPHLEEAYRFAELVFPLLPEPY 351

Query: 61  VTLRDRAQT 69
            +L  R  T
Sbjct: 352 ASLAGRGLT 360


>YPO3625 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene
           tetrahydromethanopterin reductase and related
           flavin-dependent oxidoreductases Ype Yersinia pestis
          Length = 382

 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 44/56 (78%), Positives = 50/56 (89%)

Query: 1   VGLVRGGAGTSLVGDAATVAERLQEYADLGVDTFVLSGYPHLEEAIRFAELVFPLL 56
           VGLVRGGAGT+LVGD  TVA+R+QEYADLG+DTFV SGYPHLEEA R +EL+FP L
Sbjct: 294 VGLVRGGAGTALVGDGPTVAQRIQEYADLGIDTFVFSGYPHLEEAYRVSELLFPHL 349


>ycbN [C] COG2141 Coenzyme F420-dependent N5,N10-methylene
           tetrahydromethanopterin reductase and related
           flavin-dependent oxidoreductases Eco Escherichia coli
           K12
          Length = 381

 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/56 (76%), Positives = 48/56 (85%)

Query: 1   VGLVRGGAGTSLVGDAATVAERLQEYADLGVDTFVLSGYPHLEEAIRFAELVFPLL 56
           VGLVRGGAGT+LVGD  TVA R+ EYA LG+D+FVLSGYPHLEEA R  EL+FPLL
Sbjct: 294 VGLVRGGAGTALVGDGPTVAARINEYAALGIDSFVLSGYPHLEEAYRVGELLFPLL 349


>mlr5216 [C] COG2141 Coenzyme F420-dependent N5,N10-methylene
           tetrahydromethanopterin reductase and related
           flavin-dependent oxidoreductases Mlo Mesorhizobium loti
          Length = 390

 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/56 (75%), Positives = 47/56 (83%)

Query: 1   VGLVRGGAGTSLVGDAATVAERLQEYADLGVDTFVLSGYPHLEEAIRFAELVFPLL 56
           VGLVRGGAGT+LVGD  T+AER+ EY  LG+DTF+LSGYPHLEEA RF ELV P L
Sbjct: 300 VGLVRGGAGTALVGDPDTIAERIDEYRRLGIDTFILSGYPHLEEAYRFGELVLPKL 355