BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0015.p         (379 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BH1161 [GEPR] COG0477 Permeases of the major facilitator superfa...    63   9e-10

>BH1161 [GEPR] COG0477 Permeases of the major facilitator superfamily Bha
           Bacillus halodurans
          Length = 406

 Score = 63.2 bits (152), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 154/356 (43%), Gaps = 33/356 (9%)

Query: 14  RHAAMSLSAALPCDIVLYLLLPMYADQFHIS-LAEAGVLLAANRLVRIAGYRWVARFYAQ 72
           R  A+  + AL  D ++ ++LP+Y ++F ++ + + GVLL+ NRL+R+     V  FY  
Sbjct: 8   RWIAILTAIALLGDSMILIVLPLYWEEFGLTAIWQVGVLLSVNRLIRLPINPLVGWFYRT 67

Query: 73  RGDRPTCTLAVCAAIVCALGYTMASGFWALLPLRLLWGMAFAGLNL--STQAMSTSNPQG 130
              R    +A+  A+V  L Y    GF  LL  R+LWG+A+A + L      +  SN + 
Sbjct: 68  YERRTGFFIAMSLALVTTLAYGYVQGFIWLLIARILWGVAWAFIRLGGYLTVLDHSNSRN 127

Query: 131 AARRSGRSRGVIAIGPMLWLPTAALLAPHIGPRLVFALVAATALLGL-LAARRLPQHAYA 189
                G   G+  +G ++ +    ++        V  L A  A   L    + +P+   +
Sbjct: 128 RGELIGLYNGLWGLGGLVGMLAGGIVVEQTSIAFVTTLFAGAACFSLPTLFKVIPR---S 184

Query: 190 PPQPRRWKLPNALDWW----------SFLEGLTLDGLFIVGLAYMSKQSFGAD------- 232
             +  R K     DW+          SF  GL + G+F   L+   ++    +       
Sbjct: 185 VSEQVRDKTDGKGDWFSIHTGSILLLSFTTGLVIFGVFATTLSPFVERMIDDNWTWHGLV 244

Query: 233 --GELVAGVLMALRYAGEIVLSPLGGWLAERFGAVKVLVTLSLATCVALVGFGGGLLWLF 290
                VAG++ A+R+A +  ++P+ G   +R    K  V  S+   +A + F  G +  F
Sbjct: 245 IGAATVAGLIQAVRWAWDPFVAPMVGKRLDRMRT-KGPVVFSMLLMIASLFFIAGSVHDF 303

Query: 291 AGVIVILRALQL-----PLLAPIVAARTAPE-QRVHALAGRAIWRDIGAGMGPXGG 340
               V L   QL       L   +AA  A +  RV  +    I  D+GA +GP  G
Sbjct: 304 VLASVFLLVFQLISTIFVTLTDSLAAEVANQTDRVRMMTAHTIAIDLGAALGPLIG 359