BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0009.p (336 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transp... 282 7e-76 RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 232 1e-60 RSc1338 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 229 7e-60 YPO3624 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate trans... 221 2e-57 ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transpor... 220 3e-57 >PA3445 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Pae Pseudomonas aeruginosa Length = 323 Score = 282 bits (722), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 140/276 (50%), Positives = 190/276 (68%), Gaps = 1/276 (0%) Query: 53 LRVGYQK-GALSLIRAHGVLEQRLAPLGATVKWVEFSAGPVQLEALGAGSIDFGDVGEAP 111 LR+GYQK G L L++A G LE+RLA G V+W EF GP LE L GSIDFG GE P Sbjct: 32 LRIGYQKYGTLVLLKARGTLEKRLAEDGVKVQWTEFPGGPQLLEGLNVGSIDFGVTGETP 91 Query: 112 PIFAQAAGTPLVYVGATVPRPYVEAVLVKDDSELQRPQQLKGKRIALNKGSNVHYFLVKL 171 P+FAQAAG L+YV P P EA+L+ DS ++ +LKG+++ALNKGSNVHY LV+ Sbjct: 92 PVFAQAAGADLLYVAYEPPAPTSEAILLPKDSPIRSVAELKGRKVALNKGSNVHYLLVRA 151 Query: 172 LEKHGLKYGDVTPVWLAPADARAAFERGAVDAWAIWEPYLAAAQQGLKARILADADGVVK 231 LE+ GLKY D+ PV+L PADARAAFER +VDAW IW+PY AAA++ L AR+L D +V Sbjct: 152 LEQAGLKYSDIQPVYLPPADARAAFERHSVDAWVIWDPYQAAAEKQLSARVLVDGRELVD 211 Query: 232 NRAYYFSTRDYARDHADLLRIALEELGKIDAWAQARPDEYASELAGILGLPRSVLDVVVR 291 N +Y +TR YA+ H +L ++E+ ++ W++A P + ++A +LGLP + V+ Sbjct: 212 NHQFYLATRTYAQRHPQVLDKLVDEIREVGDWSRANPQQVTEQVAPLLGLPADITLTAVK 271 Query: 292 RYHYGTLPITRAILDEQQQIADTFLDLRLIPRKISL 327 R YG IT A+++ QQ+IADTF L+LIP+ +S+ Sbjct: 272 RQGYGAQLITPAVVEAQQKIADTFTQLKLIPKPLSI 307 >RSp1383 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 334 Score = 232 bits (591), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 127/276 (46%), Positives = 171/276 (61%), Gaps = 1/276 (0%) Query: 53 LRVGYQK-GALSLIRAHGVLEQRLAPLGATVKWVEFSAGPVQLEALGAGSIDFGDVGEAP 111 +R+G+QK G L++++A G L+ LA LG ++W EF AGP LEAL AGSIDFG G P Sbjct: 44 VRIGFQKAGLLAVLKAQGALDTPLAELGYRIEWKEFPAGPQLLEALNAGSIDFGYTGAPP 103 Query: 112 PIFAQAAGTPLVYVGATVPRPYVEAVLVKDDSELQRPQQLKGKRIALNKGSNVHYFLVKL 171 +FAQAAG VYVGA EA+ V+D S + LKGKRIAL KGS+ +Y LV+L Sbjct: 104 AVFAQAAGARFVYVGAEPGASANEALFVRDGSPARGVADLKGKRIALQKGSSSNYLLVQL 163 Query: 172 LEKHGLKYGDVTPVWLAPADARAAFERGAVDAWAIWEPYLAAAQQGLKARILADADGVVK 231 L++ GL D+ P++L PA+ARAAFE GAVDAW +W+PY A AQ LK R LAD G+ Sbjct: 164 LKRAGLTVQDIQPIYLPPAEARAAFESGAVDAWVVWDPYYALAQTALKVRTLADYTGLPS 223 Query: 232 NRAYYFSTRDYARDHADLLRIALEELGKIDAWAQARPDEYASELAGILGLPRSVLDVVVR 291 +Y +T + + H + L +L W P E A+ L+ LG+ V++ +R Sbjct: 224 PFNFYEATPGFVQAHPRAVNAILAQLRTTGLWVNRHPRETAALLSPKLGIAPPVVETWLR 283 Query: 292 RYHYGTLPITRAILDEQQQIADTFLDLRLIPRKISL 327 R YG PIT ++ QQQ+AD F +LIPR +S+ Sbjct: 284 RVPYGVTPITPEVIAAQQQVADLFHQQKLIPRPVSV 319 >RSc1338 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Rso Ralstonia solanacearum Length = 336 Score = 229 bits (584), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 130/296 (43%), Positives = 173/296 (58%), Gaps = 8/296 (2%) Query: 33 AAAAAGASLPAWVHAAAPRQLRVGYQKGALSLI--RAHGVLEQRLAPLGATVKWVEFSAG 90 A A A+LP V P QLR+G+QK A++L+ + LEQR V W+EF AG Sbjct: 27 ARGADAATLPNIV---PPAQLRIGFQKSAVNLVIVKESRALEQRFP--DTRVHWLEFPAG 81 Query: 91 PVQLEALGAGSIDFGDVGEAPPIFAQAAGTPLVYVGATVPRPYVEAVLVKDDSELQRPQQ 150 P QLEAL AGS+D G+ PP+FAQAAG L Y+G P+P A++V S LQ Sbjct: 82 PQQLEALSAGSLDVAITGDTPPVFAQAAGRDLRYIGVEPPKPDSSAIVVPRGSALQALAD 141 Query: 151 LKGKRIALNKGSNVHYFLVKLLEKHGLKYGDVTPVWLAPADARAAFERGAVDAWAIWEPY 210 LKGKR+AL KGS+ H+ +V L K GL + D+ PV+L PADARAAFERG+VDAW IW+PY Sbjct: 142 LKGKRVALQKGSSAHFLVVSGLRKGGLTFADIQPVYLTPADARAAFERGSVDAWGIWDPY 201 Query: 211 LAAAQQGLKARILADADGVVKNRAYYFSTRDYARDHADLLRIALEELGKIDAWAQARPDE 270 AA + + R+LA G+ N +YF+ R +A H D + EL + D Q E Sbjct: 202 YAATELAIGPRVLATGRGLSSNNTFYFAPRAFAEQHGDTIAALFAELARADRLVQQNRKE 261 Query: 271 YASELAGILGLPRSVLDVVV-RRYHYGTLPITRAILDEQQQIADTFLDLRLIPRKI 325 A +A GL + + + + RR P+T + EQQ++AD F L LIPR + Sbjct: 262 AAQRIAEFSGLSLATVHLFLSRRPPSPVRPVTPEAIAEQQRVADAFHGLGLIPRPV 317 >YPO3624 [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Ype Yersinia pestis Length = 373 Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 114/282 (40%), Positives = 171/282 (60%), Gaps = 5/282 (1%) Query: 49 APRQLRVGYQKGALSLI--RAHGVLEQRLAPLGATVKWVEFSAGPVQLEALGAGSIDFGD 106 AP Q R+GYQKG+++L+ + H +LE+R + W+EF AGP LEAL SID G Sbjct: 40 APAQFRIGYQKGSVNLVLAKTHQLLEKRFP--DTQISWIEFPAGPQMLEALNVNSIDLGS 97 Query: 107 VGEAPPIFAQAAGTPLVYVGATVPRPYVEAVLVKDDSELQRPQQLKGKRIALNKGSNVHY 166 G+ PPIFAQAAG L+YVG P+P E +LV ++S + +LKG ++A KGS+ H Sbjct: 98 TGDIPPIFAQAAGADLLYVGMEPPKPKAEVILVPENSAINSVAELKGHKVAFQKGSSSHN 157 Query: 167 FLVKLLEKHGLKYGDVTPVWLAPADARAAFERGAVDAWAIWEPYLAAAQQGLKARILADA 226 L++ L+K GLK+ D+ PV+L PADARAAF++G VDAW IW+PY +AA R+L D Sbjct: 158 LLLQALQKAGLKFTDIQPVYLTPADARAAFQQGNVDAWVIWDPYYSAALLQGGIRVLIDG 217 Query: 227 DGVVKNRAYYFSTRDYARDHADLLRIALEELGKIDAWAQARPDEYASELAGILGLPRSVL 286 + + ++Y ++R Y + ++ LE L + DA + + + LA +GLP +V+ Sbjct: 218 SQLNQTGSFYLASRPYTEANGPFIQQVLEVLTQADALTLSDRAQSITLLANAMGLPEAVI 277 Query: 287 -DVVVRRYHYGTLPITRAILDEQQQIADTFLDLRLIPRKISL 327 + R P+++A + QQ+ AD F RL+P K+ + Sbjct: 278 ASYLDHRPPTAIQPLSQATVAAQQRTADLFFANRLLPVKVDI 319 >ssuA [P] COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Eco Escherichia coli K12 Length = 333 Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 117/302 (38%), Positives = 178/302 (58%), Gaps = 5/302 (1%) Query: 29 VTLGAAAAAGASLPAWVHAAAPRQLRVGYQKGALSLI--RAHGVLEQRLAPLGATVKWVE 86 + L A S A ++P LR+GYQKG++ ++ ++H +LE+R + + WVE Sbjct: 19 IKLALAGLLSVSTFAVAAESSPEALRIGYQKGSIGMVLAKSHQLLEKRYPE--SKISWVE 76 Query: 87 FSAGPVQLEALGAGSIDFGDVGEAPPIFAQAAGTPLVYVGATVPRPYVEAVLVKDDSELQ 146 F AGP LEAL GSID G G+ PPIFAQAAG LVYVG P+P E +LV ++S ++ Sbjct: 77 FPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIK 136 Query: 147 RPQQLKGKRIALNKGSNVHYFLVKLLEKHGLKYGDVTPVWLAPADARAAFERGAVDAWAI 206 LKG ++A KGS+ H L++ L + GLK+ D+ P +L PADARAAF++G VDAWAI Sbjct: 137 TVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAI 196 Query: 207 WEPYLAAAQQGLKARILADADGVVKNRAYYFSTRDYARDHADLLRIALEELGKIDAWAQA 266 W+PY +AA R+L D + + ++Y + R YA + ++ L + DA ++ Sbjct: 197 WDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRS 256 Query: 267 RPDEYASELAGILGLPRSVLDVVVRRYHYGTL-PITRAILDEQQQIADTFLDLRLIPRKI 325 + ++ + LA +GLP V+ + T+ P+ + QQQ AD F + RL+P+K+ Sbjct: 257 QREQSIALLAKTMGLPAPVIASYLDHRPPTTIKPVNAEVAALQQQTADLFYENRLVPKKV 316 Query: 326 SL 327 + Sbjct: 317 DI 318