BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0116.p (641 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1752 [E] COG4177 ABC-type branched-chain amino acid transport... 358 2e-98 RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport... 283 1e-75 BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transpo... 238 3e-62 RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport... 186 2e-46 BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transpo... 185 3e-46 >RSc1752 [E] COG4177 ABC-type branched-chain amino acid transport system, permease component Rso Ralstonia solanacearum Length = 440 Score = 358 bits (920), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 200/324 (61%), Positives = 244/324 (75%), Gaps = 9/324 (2%) Query: 6 LPWLGFALVLLAAPLVFPQSAALSLLSQMGTMVLLCLSYNMLLGEGGMLSFGHAVYSGLG 65 L W ALV+L PL++PQ A++LLSQMG M++ LSYNMLLG+ GMLSFGHAVY+GLG Sbjct: 31 LIWGTTALVMLVLPLIWPQGFAITLLSQMGIMIIFALSYNMLLGQAGMLSFGHAVYAGLG 90 Query: 66 AFGAIHLMNRMAE-------GALAFPMTLVPLAGGLTGALCGVLLGYLTTRRAGTTFAMI 118 AF A+HL+NR+ G LA + L+P+AGGL GAL GVL GY+TTRRAGTTF+MI Sbjct: 91 AFVAVHLLNRIGAAPALGIGGPLA--VALLPVAGGLGGALFGVLFGYVTTRRAGTTFSMI 148 Query: 119 TLGLVELVSACVLMFPEVFGGEGGISGNRVIGEPVLGISYGPQIQVYYLIAGWLLVCAIA 178 TLG+ E+V A LM P+ FGGEGG+S NR IGEP+LGIS+G QVYYLIA W L+ Sbjct: 149 TLGIGEMVFASALMLPDFFGGEGGVSTNRSIGEPLLGISFGLARQVYYLIAVWCLISMAL 208 Query: 179 IWALRATPLGRILNAVRDNPERAAFIGYDPQRVRYLALILSAFFAGVSGGLSAINFEIVS 238 ++A TPLGR+ NAVRDNPER AF+GY+PQRVRYL +ILSAFFAG++G LS INFEIV+ Sbjct: 209 MYAWTQTPLGRLANAVRDNPERVAFVGYNPQRVRYLVVILSAFFAGIAGALSCINFEIVT 268 Query: 239 AEYVGALRSGAILLFTFIGGSAYFYGPIVGGVVGVLFSSWLSAYTQAWQFYLGAFFILIV 298 AE V A+RSGA+LL FIGG F+GPI+G V+ V F+ LS T+AW YLG FF+L+V Sbjct: 269 AENVSAVRSGAVLLAAFIGGMGTFFGPIIGAVLTVFFTVALSGITKAWLLYLGLFFVLMV 328 Query: 299 MTAPGGLASLIDQGWRILRSGAGG 322 M APGG+ASL+ ILR G G Sbjct: 329 MYAPGGIASLLTMHAPILRRGKLG 352 >RSc1753 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 266 Score = 283 bits (723), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 144/241 (59%), Positives = 180/241 (74%) Query: 395 ALSLQGLHKAFDGSPILRGVDLELLAGERCALIGPNGAGKSSLFHLVSGRYRADAGRVTL 454 AL L+ + K F + I+RGV+L + GER ALIGPNGAGKS+ F+L+SGR+ AG V L Sbjct: 7 ALELRDVRKRFGATEIIRGVNLTIGRGERHALIGPNGAGKSTTFNLISGRFAPSAGSVRL 66 Query: 455 HGVDITRQSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRIGGSHE 514 +G +I +P +INR GL+RSFQIT++F RLS FEN+RCA+LW+LGY+Y+FW R+ + Sbjct: 67 NGEEIAGLAPYEINRRGLSRSFQITNIFHRLSVFENLRCAVLWSLGYQYSFWHRLAELRD 126 Query: 515 ASARALTVLQQVGLAARADVAAGELSYAEQRALELAVTIAADASVILLDEPTAGMSRAES 574 A RA VL+Q+GL R D AAG L+YAEQRALE+ +TIA A VILLDEPTAGMSR+ES Sbjct: 127 ARERAEAVLEQIGLTHRHDAAAGTLTYAEQRALEIGITIAGGADVILLDEPTAGMSRSES 186 Query: 575 AAMVALIREVTMGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDTAPRIRANEDVQALY 634 V LIR+VT+GKTL+MVEHDM VVF LADRI+V+ G VIA DT IR N V+ Y Sbjct: 187 DHAVDLIRKVTVGKTLVMVEHDMSVVFGLADRISVLVYGEVIATDTPEAIRNNRRVKEAY 246 Query: 635 L 635 L Sbjct: 247 L 247 >BMEII0066 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 251 Score = 238 bits (608), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 119/251 (47%), Positives = 168/251 (66%) Query: 390 MIAAVALSLQGLHKAFDGSPILRGVDLELLAGERCALIGPNGAGKSSLFHLVSGRYRADA 449 M+ L L L+K+F + I+RGV+L + GER A+IGPNGAGKS+LFHL+SG + + Sbjct: 1 MMTKDILVLDQLNKSFGPAHIIRGVNLAVRDGERHAVIGPNGAGKSTLFHLISGNFTPSS 60 Query: 450 GRVTLHGVDITRQSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRI 509 G + G +I +P +NR GLARSFQIT++FP L+ FEN+R A++ ++ FWR + Sbjct: 61 GSIRFQGEEIGGLTPAAVNRKGLARSFQITNIFPGLTVFENIRLAVMRRYKVQFTFWRPV 120 Query: 510 GGSHEASARALTVLQQVGLAARADVAAGELSYAEQRALELAVTIAADASVILLDEPTAGM 569 + +A ++L+QV L ARA A +LSY+EQR+LE+ +T+A+D +I+LDEP AGM Sbjct: 121 SSMRKVTAEVESLLEQVRLTARAYTLASQLSYSEQRSLEIGMTLASDPRLIILDEPMAGM 180 Query: 570 SRAESAAMVALIREVTMGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDTAPRIRANED 629 S+ E+ V LIRE+T +TL++VEHDM VVF LADRI+V+ G +IA T IR N Sbjct: 181 SQEETDYTVGLIREITQNRTLMIVEHDMYVVFTLADRISVLVYGEIIATGTPKEIRENAR 240 Query: 630 VQALYLDRRRH 640 V+ YL H Sbjct: 241 VREAYLGEEAH 251 >RSc3344 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Rso Ralstonia solanacearum Length = 256 Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/246 (41%), Positives = 143/246 (58%) Query: 390 MIAAVALSLQGLHKAFDGSPILRGVDLELLAGERCALIGPNGAGKSSLFHLVSGRYRADA 449 M + L +GL KAF G + V+L + G ALIGPNGAGK++ F+L++ Sbjct: 1 MAQDIILETRGLTKAFKGFTAVSDVNLRVRRGSIHALIGPNGAGKTTCFNLLTKFLVPTR 60 Query: 450 GRVTLHGVDITRQSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYRYAFWRRI 509 G + +GVDIT + P QI R G+ RSFQI+++FP LS ENVR L LG YAFWR Sbjct: 61 GTILFNGVDITPERPAQIARRGVIRSFQISAVFPHLSVLENVRIGLQRQLGTAYAFWRSE 120 Query: 510 GGSHEASARALTVLQQVGLAARADVAAGELSYAEQRALELAVTIAADASVILLDEPTAGM 569 + RA+ +L QVGL A EL Y +RALE+A T+A + ++LLDEPT GM Sbjct: 121 KTLAVLNDRAMQLLDQVGLTPFAGTVTVELPYGRKRALEIATTLAMEPELMLLDEPTQGM 180 Query: 570 SRAESAAMVALIREVTMGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDTAPRIRANED 629 + + LI+ V G+T+LMVEH+M VV +AD+I V+ G+++A + N Sbjct: 181 GHEDVDRVTELIQRVAEGRTILMVEHNMNVVSSIADKITVLQRGQILAEGPYEDVSKNPQ 240 Query: 630 VQALYL 635 V Y+ Sbjct: 241 VMEAYM 246 >BMEII0343 [E] COG0411 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 272 Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 99/253 (39%), Positives = 152/253 (60%) Query: 383 AAPGRAVMIAAVALSLQGLHKAFDGSPILRGVDLELLAGERCALIGPNGAGKSSLFHLVS 442 A PG + + + LS +GL K+F G ++ VDL++ ALIGPNGAGK+++F+L++ Sbjct: 15 AGPGTSQTASGIVLSARGLGKSFGGFHAVKNVDLDVEHARVHALIGPNGAGKTTVFNLLT 74 Query: 443 GRYRADAGRVTLHGVDITRQSPQQINRLGLARSFQITSLFPRLSAFENVRCALLWTLGYR 502 + +G +TL G IT+ P ++ R GL RSFQI++ FP L+ ENV+ AL G Sbjct: 75 KFLQPTSGEITLLGETITKTDPARVARKGLVRSFQISATFPHLTVLENVKVALQRPNGLA 134 Query: 503 YAFWRRIGGSHEASARALTVLQQVGLAARADVAAGELSYAEQRALELAVTIAADASVILL 562 FWR + A+A+ +L++VGLA A +LSY +RALE+A T+A D V+LL Sbjct: 135 TQFWRSLSALDWLDAQAVELLERVGLADARHALAADLSYGRKRALEIATTLALDPKVLLL 194 Query: 563 DEPTAGMSRAESAAMVALIREVTMGKTLLMVEHDMQVVFDLADRIAVMDNGRVIACDTAP 622 DEP AGM + + ALI +V + +LMVEH+++VV D+A + V+ G ++A Sbjct: 195 DEPLAGMGHEDVHTIAALITDVAKDRAVLMVEHNLKVVADIAHHVTVLQRGEILASGDYA 254 Query: 623 RIRANEDVQALYL 635 + +E V+ Y+ Sbjct: 255 TVSKDERVRTAYM 267