BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0074.p (243 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA0797 [K] COG1802 Transcriptional regulators Pae Pseudomonas ae... 381 e-106 VC1335 [K] COG1802 Transcriptional regulators Vch Vibrio cholerae 214 2e-55 BMEII0281 [K] COG1802 Transcriptional regulators Bme Brucella me... 106 4e-23 mll6988 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium... 91 2e-18 SMa0160 [K] COG1802 Transcriptional regulators Sme Sinorhizobium... 88 1e-17 >PA0797 [K] COG1802 Transcriptional regulators Pae Pseudomonas aeruginosa Length = 240 Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust. Identities = 185/213 (86%), Positives = 199/213 (93%) Query: 13 DGETLSEHVFRKIQSAIVQGEIAPGSKISEPELARTYGISRGPLREAIHRLEGQNLLVRV 72 DGETLSEHVFRKIQSAIV GEIAPGSKISEPELARTYGISRGPLREAIHRLEG LLVRV Sbjct: 14 DGETLSEHVFRKIQSAIVSGEIAPGSKISEPELARTYGISRGPLREAIHRLEGLRLLVRV 73 Query: 73 PHVGARVVSLTLEGLVELFQIRESLEGMACRLAAQRMSRAELDELRRVLDTHEKDEAFQA 132 PHVGARVVSL+ L+EL++IRESLEGMACRLAA+RMS+AE+DELRRVLDTHE+DEAFQA Sbjct: 74 PHVGARVVSLSHAELIELYEIRESLEGMACRLAAERMSQAEIDELRRVLDTHERDEAFQA 133 Query: 133 GRGYYQQEGDYDFHYKIIQASGNQILTRILCGELYQLARMYRIQYSATPHRPRQAFAEHH 192 GRGYYQQEGDYDFHY+IIQ SGN LTR+LCGELYQL RMYRIQYS TP+RPRQAFAEHH Sbjct: 134 GRGYYQQEGDYDFHYRIIQGSGNATLTRMLCGELYQLVRMYRIQYSTTPNRPRQAFAEHH 193 Query: 193 RILDALADGDGELADLLMRRHIGASRRNIEHQI 225 RILDA+AD DGELA+LLMRRHI ASRRNIE Q+ Sbjct: 194 RILDAIADRDGELAELLMRRHISASRRNIERQL 226 >VC1335 [K] COG1802 Transcriptional regulators Vch Vibrio cholerae Length = 235 Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 111/210 (52%), Positives = 145/210 (69%) Query: 16 TLSEHVFRKIQSAIVQGEIAPGSKISEPELARTYGISRGPLREAIHRLEGQNLLVRVPHV 75 T SE++ + AIV+G++APGSKISEPELA+ + +SRGPLREA+ R+EG L+ R+PH+ Sbjct: 18 TKSENLTEYLIEAIVEGQLAPGSKISEPELAKQFQVSRGPLREALMRVEGLGLIERIPHI 77 Query: 76 GARVVSLTLEGLVELFQIRESLEGMACRLAAQRMSRAELDELRRVLDTHEKDEAFQAGRG 135 GARV+ L+ LVEL+ +RE+LEGMA RLAA+ ++ EL L +L TH G Sbjct: 78 GARVIQLSPTKLVELYAVREALEGMAARLAARNITEIELAGLESLLSTHSTHIDQVEGAS 137 Query: 136 YYQQEGDYDFHYKIIQASGNQILTRILCGELYQLARMYRIQYSATPHRPRQAFAEHHRIL 195 Y+ Q+GD+DFHY+IIQA NQ L +LC ELY L RMYR Q + RP +A EH IL Sbjct: 138 YFHQQGDFDFHYRIIQACRNQQLIGLLCDELYHLLRMYRYQSPRSHSRPVEALEEHKFIL 197 Query: 196 DALADGDGELADLLMRRHIGASRRNIEHQI 225 A+ D ELA++LMRRHI SR+ IE QI Sbjct: 198 RAIRQRDEELAEMLMRRHISRSRQLIEQQI 227 >BMEII0281 [K] COG1802 Transcriptional regulators Bme Brucella melitensis Length = 238 Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 17 LSEHVFRKIQSAIVQGEIAPGSKISEPELARTYGISRGPLREAIHRLEGQNLLVRVPHVG 76 L + V ++ I G+ APG+ + + +A +GISR PLREA+ LE L++ +P G Sbjct: 22 LLDEVAEALRERIYAGDYAPGAILRQEHIATEFGISRTPLREALRVLERDGLVIHLPGRG 81 Query: 77 ARVVSLTLEGLVELFQIRESLEGMACRLAAQRMSRAELDELRRVLDTHEKDEAFQAGRGY 136 RV S L L++ + +RE L+G+A R AA+R S A++ +LR + +K + Y Sbjct: 82 VRVASADLTRLIDAYAVREVLDGVAARFAAERASDADIAKLRAHVAGQDKVVDPWDPKAY 141 Query: 137 YQQEGDYDFHYKIIQASGNQILTRILCGELYQLARMYRIQYSATPHRPRQAFAEHHRILD 196 Q + DFH ++ +GN L L ++++ +S + R R A EH I++ Sbjct: 142 TQ--SNVDFHMAVMNTAGNASLI-AFVPLLRMTSQVFAPSFSLSVDRARDAIREHAAIVE 198 Query: 197 ALADGDGELADLLMRRHIGASRRNIE 222 A+A DGE A+ L R HI A+ +E Sbjct: 199 AIAARDGEEAERLARAHIRATTARLE 224 >mll6988 [K] COG1802 Transcriptional regulators Mlo Mesorhizobium loti Length = 220 Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 5/209 (2%) Query: 7 LPGNDRDGETLSE-HVFRKIQSAIVQGEIAPGSKISEPELARTYGISRGPLREAIHRLEG 65 +P N + +E + +Q A+ G PG ++ E+A G+SR P+REA RL Sbjct: 1 MPTNFPEMSATAEVEAYNHVQRALRLGRYKPGDRLIPEEIAAEIGMSRMPVREAFRRLAS 60 Query: 66 QNLLVRVPHVGARVVSLTLEGLVELFQIRESLEGMACRLAAQRMSRAELDELRRVLDTHE 125 L+V P+ G V LT++ L E+F+IR LEG+A RLA R+ E +EL R+L+ E Sbjct: 61 DGLVVLRPNRGCVVAGLTVDELFEIFEIRSVLEGLAVRLAVPRIDDEEFEELDRLLERME 120 Query: 126 KDEAFQAGRGYYQQEGDYDFHYKIIQASGNQILTRILCGELYQLARMYRIQYSATPHRPR 185 + A Q+G G + +FH +I S L + + RI + ++P Sbjct: 121 R--AGQSGGGDWVVRHQ-EFHGRICALSQRPKLIHQISALHVVIEPYMRIWFDDC-NKPL 176 Query: 186 QAFAEHHRILDALADGDGELADLLMRRHI 214 A EH ++ AL GD A+ +M+ H+ Sbjct: 177 SAREEHAAVIAALRSGDAHHAEQVMQEHV 205 >SMa0160 [K] COG1802 Transcriptional regulators Sme Sinorhizobium meliloti Length = 224 Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 15/208 (7%) Query: 17 LSEHVFRK----IQSAIVQGEIAPGSKISEPELARTYGISRGPLREAIHRLEGQNLLVRV 72 +SE++F K I++ IV GE PG ++ E +LA +G+SR P+REA+ +L L+ Sbjct: 1 MSENIFYKLRDDIENGIVTGEFEPGERLDETQLAMRFGVSRTPIREALMQLSAIGLVEIR 60 Query: 73 PHVGARVVSLTLEGLVELFQIRESLEGMACRLAAQRMSRAELDELRRVLDTHEK-DEAF- 130 P GA VV + + E+F++ LEGMA LAA+R + + L L HEK EA Sbjct: 61 PRRGAVVVDPAPQRVYEMFEVMAELEGMAGALAARRHTEEDSAAL---LAAHEKCREAVL 117 Query: 131 --QAGRGYYQQEGDYDFHYKIIQASGNQILTRILCGELYQLARMYRIQYSATPHRPRQAF 188 + R YY+ E FH I AS + L C L++ R YR +R + +F Sbjct: 118 SEETDRYYYENE---IFHRAIYTASHSGFLEE-QCTTLHRRLRPYRRLQLRVRNRMKVSF 173 Query: 189 AEHHRILDALADGDGELADLLMRRHIGA 216 EH I++A+ G+ + A +R H+ Sbjct: 174 REHGEIVEAILSGNTDGAREGLRSHVAV 201