BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0037.p         (94 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc1543 [K] COG0640 Predicted transcriptional regulators Rso Ral...   103   7e-23
AGl2725 [K] COG0640 Predicted transcriptional regulators Atu Agr...    98   5e-21
XF0767 [K] COG0640 Predicted transcriptional regulators Xfa Xyle...    93   1e-19
SMa1056 [K] COG0640 Predicted transcriptional regulators Sme Sin...    92   2e-19
mlr2159 [K] COG0640 Predicted transcriptional regulators Mlo Mes...    92   2e-19

>RSc1543 [K] COG0640 Predicted transcriptional regulators Rso Ralstonia
           solanacearum
          Length = 121

 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 68/91 (74%)

Query: 1   MRQAAGEAVGALKVLANEDRLLLLCQLSQQEMCVSELEEQLDIRQPTLSQQLGVLRNEGV 60
           +R AA +A   LK +A+EDRLLLLCQL+Q E  V ELE  + + QP+LSQ LGVLR+EG+
Sbjct: 24  LRDAAAQACAVLKAMAHEDRLLLLCQLTQGERNVGELEMLVGLHQPSLSQHLGVLRDEGL 83

Query: 61  VSTRRDGKRIYYRVADARLLEMLDLMYRLYC 91
           V+TRRDGK IYYR+A   +++++  +  LYC
Sbjct: 84  VATRRDGKYIYYRLASFEVIQIMQTLSSLYC 114


>AGl2725 [K] COG0640 Predicted transcriptional regulators Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 117

 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/94 (50%), Positives = 65/94 (69%)

Query: 1   MRQAAGEAVGALKVLANEDRLLLLCQLSQQEMCVSELEEQLDIRQPTLSQQLGVLRNEGV 60
           M + A E    LK LA+  RL+L C L+Q E  V ELE +LDIRQPTLSQQLGVLR  G+
Sbjct: 21  MEKRATEVAILLKTLAHPARLMLACTLAQGEFSVGELEAKLDIRQPTLSQQLGVLREAGI 80

Query: 61  VSTRRDGKRIYYRVADARLLEMLDLMYRLYCPKE 94
           V TRR+ K+I+YR+A+ +   +++ +Y ++C  E
Sbjct: 81  VDTRREAKQIFYRLAEDKAARLIEALYAIFCAPE 114


>XF0767 [K] COG0640 Predicted transcriptional regulators Xfa Xylella
           fastidiosa 9a5c
          Length = 114

 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 66/94 (70%)

Query: 1   MRQAAGEAVGALKVLANEDRLLLLCQLSQQEMCVSELEEQLDIRQPTLSQQLGVLRNEGV 60
           M + A E    LK L++  RL+L+C L + E  V ELE+Q+ I QPTLSQQLGVLR  G+
Sbjct: 18  MEKRANEVANLLKTLSHPVRLMLVCTLVEGEFSVGELEQQIGIGQPTLSQQLGVLRESGI 77

Query: 61  VSTRRDGKRIYYRVADARLLEMLDLMYRLYCPKE 94
           V TRR+ K+I+YR+ +A+  ++++ +Y ++C +E
Sbjct: 78  VETRRNIKQIFYRLTEAKAAQLVNALYTIFCAQE 111


>SMa1056 [K] COG0640 Predicted transcriptional regulators Sme Sinorhizobium
           meliloti
          Length = 115

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/94 (45%), Positives = 61/94 (64%)

Query: 1   MRQAAGEAVGALKVLANEDRLLLLCQLSQQEMCVSELEEQLDIRQPTLSQQLGVLRNEGV 60
           M   AGE    LK L++  RL+++C L Q E  V ELEE++D+ QP LSQ L VLR  G+
Sbjct: 20  MASRAGEVAKLLKTLSHPARLMIVCTLVQGEYSVGELEEKVDVHQPHLSQHLTVLRGSGI 79

Query: 61  VSTRRDGKRIYYRVADARLLEMLDLMYRLYCPKE 94
           V TRRDGK+I+YR+   +   ++  +Y ++C KE
Sbjct: 80  VQTRRDGKQIFYRLTGEKAARLIAALYDIFCVKE 113


>mlr2159 [K] COG0640 Predicted transcriptional regulators Mlo Mesorhizobium
           loti
          Length = 112

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 61/91 (67%)

Query: 1   MRQAAGEAVGALKVLANEDRLLLLCQLSQQEMCVSELEEQLDIRQPTLSQQLGVLRNEGV 60
           M   AGE    LK LA+  RL+L+C L + E  VS+LEE LDI QP LSQQL VLR+  +
Sbjct: 17  MESRAGEVAALLKTLAHPMRLMLVCTLVEGEYSVSQLEETLDIHQPNLSQQLTVLRDANI 76

Query: 61  VSTRRDGKRIYYRVADARLLEMLDLMYRLYC 91
           V TRRDGK+I+YR+   +  +++  +Y ++C
Sbjct: 77  VETRRDGKQIFYRLTAEKAAQLVAALYTIFC 107