BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0141.p         (169 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3408 [E] COG1126 ABC-type polar amino acid transport system, ...   229   2e-60
CAC0112 [E] COG1126 ABC-type polar amino acid transport system, ...   187   9e-48
YPO2514 [E] COG1126 ABC-type polar amino acid transport system, ...   183   2e-46
mlr2206 [E] COG1126 ABC-type polar amino acid transport system, ...   180   1e-45
STM0828 [E] COG1126 ABC-type polar amino acid transport system, ...   180   1e-45

>RSc3408 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Rso Ralstonia solanacearum
          Length = 253

 Score =  229 bits (584), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/155 (70%), Positives = 130/155 (83%)

Query: 1   MIEVKRISKCFGRHEVLKDVSLSVAQGEVVCLIGPSGSGKSTVLRCINGLESYERGDILI 60
           MIE++ + K FG H VL+ VSL V +GEVVCLIGPSGSGKSTVLRCINGLESY+ G+I  
Sbjct: 1   MIEIRELQKHFGEHHVLRGVSLRVDKGEVVCLIGPSGSGKSTVLRCINGLESYDGGEIRA 60

Query: 61  DGQRVDRDGPDIHRLRTRVGMVFQRFNLFPHRTVLENVTEGPIYVNGLAREQARSEAMSL 120
            G+RVDRDG  IH LR+R+GMVFQRFNLFPHR+VLENV EGP+YV G   + AR++AM+L
Sbjct: 61  FGERVDRDGKAIHTLRSRMGMVFQRFNLFPHRSVLENVMEGPVYVKGERPDAARAKAMAL 120

Query: 121 LDKVGLAARCDAYPAQLSGGQQQRVAIARSLSTNP 155
           L+KVGLAA+  AYPAQLSGGQQQRVAIAR+L+  P
Sbjct: 121 LEKVGLAAKAQAYPAQLSGGQQQRVAIARALAMEP 155


>CAC0112 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Cac Clostridium acetobutylicum
          Length = 245

 Score =  187 bits (475), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 116/154 (75%)

Query: 2   IEVKRISKCFGRHEVLKDVSLSVAQGEVVCLIGPSGSGKSTVLRCINGLESYERGDILID 61
           IEVK + K +G +EVLK+++L++ + EVVC+IGPSGSGKST+LRC+N LE    G ++ID
Sbjct: 7   IEVKELKKSYGSNEVLKEINLTIDRSEVVCIIGPSGSGKSTLLRCMNRLEEITAGQLMID 66

Query: 62  GQRVDRDGPDIHRLRTRVGMVFQRFNLFPHRTVLENVTEGPIYVNGLAREQARSEAMSLL 121
           G+ +     +I +LR  VGMVFQ FNLFPH +VL+N+T  PI +N +++E+A   A  LL
Sbjct: 67  GKDISDKNINIDKLRENVGMVFQHFNLFPHLSVLKNITFAPIELNKMSKEEAEKTAFKLL 126

Query: 122 DKVGLAARCDAYPAQLSGGQQQRVAIARSLSTNP 155
           DKVGL  + + YP +LSGGQ+QRVAIAR+L+ NP
Sbjct: 127 DKVGLNDKANTYPDKLSGGQKQRVAIARALAMNP 160


>YPO2514 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Ype Yersinia pestis
          Length = 240

 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 113/155 (72%)

Query: 1   MIEVKRISKCFGRHEVLKDVSLSVAQGEVVCLIGPSGSGKSTVLRCINGLESYERGDILI 60
           MI  K +SK FG+ +VL D++L++ QGEVV +IGPSGSGKST+LRCIN LE   RG +++
Sbjct: 1   MINFKNVSKHFGKIQVLHDINLNITQGEVVVIIGPSGSGKSTLLRCINKLEVITRGQLIV 60

Query: 61  DGQRVDRDGPDIHRLRTRVGMVFQRFNLFPHRTVLENVTEGPIYVNGLAREQARSEAMSL 120
           DG  V+    D  ++R   GMVFQ+F LFPH T LENV  GP  V G ++E+A+ +A++L
Sbjct: 61  DGLDVNSPNIDERQIRLEAGMVFQQFYLFPHLTALENVAFGPTKVRGTSKEEAKKQALAL 120

Query: 121 LDKVGLAARCDAYPAQLSGGQQQRVAIARSLSTNP 155
           L KVGL  R   YPA+LSGGQQQRVAIAR+L+  P
Sbjct: 121 LSKVGLEDRAHHYPAELSGGQQQRVAIARALAVKP 155


>mlr2206 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Mlo Mesorhizobium loti
          Length = 257

 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 113/155 (72%)

Query: 1   MIEVKRISKCFGRHEVLKDVSLSVAQGEVVCLIGPSGSGKSTVLRCINGLESYERGDILI 60
           MI+ + ++K FG   VLKD++LSV   EVV + GPSGSGKST++RCINGLE+ + GD+++
Sbjct: 16  MIDFRGVNKWFGALNVLKDITLSVEPREVVVVCGPSGSGKSTLIRCINGLETIKDGDLVV 75

Query: 61  DGQRVDRDGPDIHRLRTRVGMVFQRFNLFPHRTVLENVTEGPIYVNGLAREQARSEAMSL 120
           DGQRV     ++ +LRT +G VFQ FNL+PH+T LENVT  PI+V  + R +A      L
Sbjct: 76  DGQRVGDPATNMTQLRTEIGFVFQSFNLYPHKTALENVTLAPIHVRKIPRAEAEHAGREL 135

Query: 121 LDKVGLAARCDAYPAQLSGGQQQRVAIARSLSTNP 155
           L KVGLA + +AYPAQLSGGQQQRVAIAR L   P
Sbjct: 136 LAKVGLADKVNAYPAQLSGGQQQRVAIARCLGMRP 170


>STM0828 [E] COG1126 ABC-type polar amino acid transport system, ATPase
           component Sty Salmonella typhimurium LT2
          Length = 240

 Score =  180 bits (456), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 112/155 (72%)

Query: 1   MIEVKRISKCFGRHEVLKDVSLSVAQGEVVCLIGPSGSGKSTVLRCINGLESYERGDILI 60
           MIE K +SK FG  +VL ++ L++ QGEVV +IGPSGSGKST+LRCIN LE    GD+++
Sbjct: 1   MIEFKNVSKHFGPTQVLHNIDLNIRQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60

Query: 61  DGQRVDRDGPDIHRLRTRVGMVFQRFNLFPHRTVLENVTEGPIYVNGLAREQARSEAMSL 120
           DG +V+    D   +R   GMVFQ+F LFPH T LENV  GP+ V G+ +E+A  +A +L
Sbjct: 61  DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGVKKEEAEKQAKAL 120

Query: 121 LDKVGLAARCDAYPAQLSGGQQQRVAIARSLSTNP 155
           L KVGLA R   YP++LSGGQQQRVAIAR+L+  P
Sbjct: 121 LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKP 155