BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0107.p         (188 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7029 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ...   243   1e-64
SMa1869 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ...   223   1e-58
AGl2815 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ...   221   1e-57
AGl1801 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) ...   158   5e-39
BMEII0582 [E] COG0665 Glycine/D-amino acid oxidases (deaminating...   140   2e-33

>mll7029 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Mlo
           Mesorhizobium loti
          Length = 441

 Score =  243 bits (621), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 113/141 (80%), Positives = 127/141 (90%)

Query: 12  FTAYFLAKRGISVAVVEKGRIGAEQSSRNWGWCRQQNRDARELPMATKSIDLWEQFSAET 71
           F AY+LA+RG+ VA+VEKGRIGAEQSSRNWGWCRQQNRDARELPMAT+S+DLW+ F+ ET
Sbjct: 31  FAAYYLARRGMRVALVEKGRIGAEQSSRNWGWCRQQNRDARELPMATRSLDLWDSFATET 90

Query: 72  GEDTGFNRCGLLYLSNDEEEIARWAAWGDFAKTAGVTTYMLDSKQAAERGHATGRAWKGG 131
           GEDTGF RCGLLYLSNDE E+A WA W DFAKTAGVTT+MLD  +A+ERG ATGRAWKGG
Sbjct: 91  GEDTGFRRCGLLYLSNDEAELAGWARWRDFAKTAGVTTHMLDGAEASERGRATGRAWKGG 150

Query: 132 VFSPTDGTADPGKAAPAVAVA 152
           VFSPTDGTADP +AAP+VA A
Sbjct: 151 VFSPTDGTADPSRAAPSVARA 171


>SMa1869 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Sme
           Sinorhizobium meliloti
          Length = 441

 Score =  223 bits (569), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 102/128 (79%), Positives = 114/128 (89%)

Query: 12  FTAYFLAKRGISVAVVEKGRIGAEQSSRNWGWCRQQNRDARELPMATKSIDLWEQFSAET 71
           F+AY+LA+RG+ VA+VEKGRIGAEQSSRNWGWCRQQNRDARELPMATKS+DLWE+F+AE 
Sbjct: 31  FSAYYLARRGLKVALVEKGRIGAEQSSRNWGWCRQQNRDARELPMATKSLDLWERFAAEN 90

Query: 72  GEDTGFNRCGLLYLSNDEEEIARWAAWGDFAKTAGVTTYMLDSKQAAERGHATGRAWKGG 131
           G DTGF RCGL YLSN EEE+A WA W DFA+T GVTT+MLDS QA ERG ATG+ WKGG
Sbjct: 91  GGDTGFRRCGLFYLSNSEEELAGWARWRDFARTVGVTTHMLDSAQATERGRATGKPWKGG 150

Query: 132 VFSPTDGT 139
           VFSPTDGT
Sbjct: 151 VFSPTDGT 158


>AGl2815 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 441

 Score =  221 bits (562), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/141 (73%), Positives = 121/141 (85%)

Query: 12  FTAYFLAKRGISVAVVEKGRIGAEQSSRNWGWCRQQNRDARELPMATKSIDLWEQFSAET 71
           F AY+LA+ G+ VA+VEKG IGAEQSSRNWGWCRQQNRDARELP++T+S+ LWE+F+A T
Sbjct: 31  FAAYYLARSGLKVALVEKGLIGAEQSSRNWGWCRQQNRDARELPISTQSLALWEEFAAVT 90

Query: 72  GEDTGFNRCGLLYLSNDEEEIARWAAWGDFAKTAGVTTYMLDSKQAAERGHATGRAWKGG 131
           GE+TGF RCGL YLS++E EI RWA W DFA TAGVTT+ML + +A+ERG ATG+ WKGG
Sbjct: 91  GENTGFRRCGLFYLSDNEAEIDRWARWRDFAITAGVTTHMLSANEASERGSATGKRWKGG 150

Query: 132 VFSPTDGTADPGKAAPAVAVA 152
           VFSPTDGTADP  AAPAVA A
Sbjct: 151 VFSPTDGTADPSMAAPAVARA 171


>AGl1801 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 442

 Score =  158 bits (400), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 74/137 (54%), Positives = 93/137 (67%)

Query: 14  AYFLAKRGISVAVVEKGRIGAEQSSRNWGWCRQQNRDARELPMATKSIDLWEQFSAETGE 73
           AYFL+KR   VA+VEKG IG EQS RNWGWCRQQNRDARELP+A K + LW++   E GE
Sbjct: 33  AYFLSKRKYKVALVEKGWIGGEQSGRNWGWCRQQNRDARELPLAMKGMQLWDRLGEEIGE 92

Query: 74  DTGFNRCGLLYLSNDEEEIARWAAWGDFAKTAGVTTYMLDSKQAAERGHATGRAWKGGVF 133
           D GF R GL+Y S    ++ +W  W + A+     T+ML + QA E    + R W GGV+
Sbjct: 93  DLGFRRNGLVYASTRSADVEQWERWREVARQFDFETHMLTAAQAREMTPGSTRDWIGGVY 152

Query: 134 SPTDGTADPGKAAPAVA 150
           SPTDG A+P +AAP +A
Sbjct: 153 SPTDGKAEPARAAPVLA 169


>BMEII0582 [E] COG0665 Glycine/D-amino acid oxidases (deaminating) Bme
           Brucella melitensis
          Length = 367

 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/138 (47%), Positives = 91/138 (65%)

Query: 13  TAYFLAKRGISVAVVEKGRIGAEQSSRNWGWCRQQNRDARELPMATKSIDLWEQFSAETG 72
           TA FLA+RGI V + EKG I  EQSSRNWGWCR+  RD+RE+P+  +S+ LWE  +A TG
Sbjct: 32  TALFLAERGIPVTLFEKGEIAGEQSSRNWGWCRRTGRDSREMPLIVESMRLWEGMNARTG 91

Query: 73  EDTGFNRCGLLYLSNDEEEIARWAAWGDFAKTAGVTTYMLDSKQAAERGHATGRAWKGGV 132
            +TGF   G++Y +  EE++AR+A W   A+  G+ T +L+ +QA        R   GG+
Sbjct: 92  RETGFRVKGIVYAAEKEEQMARYAEWIKIARQHGIETDLLNGEQAEALAPGLTRRLAGGM 151

Query: 133 FSPTDGTADPGKAAPAVA 150
            +P DG A+P KA PA+A
Sbjct: 152 STPLDGRAEPQKAVPAMA 169