BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0081.p (850 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA4513_2 [P] COG0369 Sulfite reductase, alpha subunit (flavoprot... 393 e-108 CC3063 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotei... 338 2e-92 PA4513_1 [S] COG3182 Uncharacterized iron-regulated membrane pro... 323 1e-87 BH0609 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotei... 207 1e-52 VC0384 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotei... 199 2e-50 >PA4513_2 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein) Pae Pseudomonas aeruginosa Length = 455 Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust. Identities = 235/462 (50%), Positives = 293/462 (63%), Gaps = 13/462 (2%) Query: 395 ASQTGQAERIALHTAARLRRSGVAVTLQALAQTTAETLRHHPRLLLIASTFGEGDAPDSA 454 ASQ+G AE++A +A +L+ +G+ V +++LA+ A L + L + STFG+G+APDSA Sbjct: 1 ASQSGFAEQLAWQSAGQLQAAGLPVRVESLARLDAGQLAEARKALFVVSTFGDGEAPDSA 60 Query: 455 RGFERR-LRQAAGQSLAHLHYAVLALGDRHYTSFCGFGHTLDHGLRQGGAKPMFPLVEVD 513 RGFER+ L QAA SL L YA+LALGDR Y FCGF + L+ GA+ +F VEVD Sbjct: 61 RGFERKVLGQAA--SLDGLSYALLALGDRQYEQFCGFARRMQGWLQGQGARSLFAPVEVD 118 Query: 514 RMDAAALRKWESELASHGLDAAVSDLLPTSSPTWSSWVLVERHHLNAGSQGEPLFHLVLQ 573 DAAALR+W+ LA + +P + W L R LN GSQGE + L L+ Sbjct: 119 DGDAAALRQWQESLAEV---TGGAAPAAWEAPAFEVWSLARRECLNPGSQGESTWLLDLR 175 Query: 574 SADSSQPAPTWQAGALLEVMPRHAPDRVALVLQRLGLDGATEVHCRGMRCSLADALACSV 633 + +S A W+AG LLE++P AP R+ LQR LDG V G+ SL ALA + Sbjct: 176 APANS--AIQWRAGDLLEIVPHQAPVRIREWLQRHNLDGQARVAVEGVEQSLEQALAGRL 233 Query: 634 LPMQ----AAADAQTQAQQLQPLTARSYSVASAMQDGTVQLLVRQQRHEDG-LGLASGWL 688 LP Q L PL+ R YS+AS DG +QL+VRQ++H DG LG+ SGWL Sbjct: 234 LPDSFEHLVGLHPQALLDALIPLSVRQYSIASLQSDGDLQLIVRQEQHADGSLGICSGWL 293 Query: 689 TEYAPLGARLQARLVDNAGFAPVSADTPAIFIGNGSGMAGLRGHLRQRIHAGGTRNWLLF 748 TEY PLGA L RL NAGF D P I IGNG+G+AGLR LR I AG RNWLLF Sbjct: 294 TEYLPLGAALTLRLRRNAGFHLPEDDVPLILIGNGTGLAGLRSLLRASIAAGRKRNWLLF 353 Query: 749 GERNERYDFLYREELQAWLQQGQLARLDLAFSRDQEARVYVQDRLREAAGELRHWLDQGA 808 GERN +D+ R EL+ L +G+L RLDLAFSRDQ ++YVQDRL EAA ELR W+D+GA Sbjct: 354 GERNFAHDYYCRAELEQALARGELQRLDLAFSRDQAEKIYVQDRLHEAADELRRWIDEGA 413 Query: 809 VLYVCGSLDGMAAGVDAVLTSLLGETGLQDLIEQNRYRRDVY 850 LYVCGSL GMA GVD VL +LGE LQ L ++ RYRRDVY Sbjct: 414 ALYVCGSLQGMAGGVDRVLREVLGEEALQRLADEGRYRRDVY 455 >CC3063 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein) Ccr Caulobacter vibrioides Length = 504 Score = 338 bits (868), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 218/486 (44%), Positives = 277/486 (56%), Gaps = 29/486 (5%) Query: 373 RAERAALGEPQQQAGGQLLVAYASQTGQAERIALHTAARLRRSGVAVTLQALAQTTAETL 432 R R A Q +G +LVAYASQTG AE +A TA L +G VTL+ L+ TA L Sbjct: 40 RQARKAADALSQGSGEPVLVAYASQTGFAEELATATAKALADTGAPVTLKDLSAVTAGDL 99 Query: 433 RHHPRLLLIASTFGEGDAPDSARGFERRLRQAAGQSLAHLHYAVLALGDRHYTSFCGFGH 492 R L + ST GEGDAPD AR F R + + L+ L Y VLALGD Y +C FG Sbjct: 100 AG--RALFVVSTTGEGDAPDPARAFIRDVMKDEAD-LSALRYGVLALGDSSYAHYCAFGR 156 Query: 493 TLDHGLRQGGAKPMFPLVEVDRMDAAALRKWESELASHGLDAAVSDLLPTSSPTWSSWVL 552 +LD L G +P+F VEVD D AALR W+ +LA+ V+D + PT+ +W L Sbjct: 157 SLDAWLSGRGGQPLFDRVEVDDADPAALRHWQGQLATL---TGVTDAPDWTRPTYDAWTL 213 Query: 553 VERHHLNAGSQGEPLFHLVLQSADSSQPAPTWQAGALLEVMPRHAPDRVALVLQRLGLDG 612 ER LN GS G +HL L + WQAG ++E+ PR+ P +VA ++ L L Sbjct: 214 AERTLLNPGSPGGEAWHLRLTPPKGA----VWQAGDIVEIGPRNDPAQVAALIAALDLP- 268 Query: 613 ATEVHCRGMRCSLADALACSVLPMQAAA-DA------QTQAQQLQPLTARSYSVASAMQD 665 AD LA LP AAA DA + A++L L R YS+AS D Sbjct: 269 ----------AEAADTLAGLRLPQDAAALDALRGLPLEALAERLTALPHREYSIASLPDD 318 Query: 666 GTVQLLVRQQRHEDGL-GLASGWLTEYAPLGARLQARLVDNAGFAPVSADTPAIFIGNGS 724 G V+L+VR DG GL SGWL +AP+GA ++AR+ N F P I IG+G+ Sbjct: 319 GGVELIVRLMTRADGAPGLGSGWLCRHAPIGAAIEARVRVNRSFHAPETKRPLILIGSGT 378 Query: 725 GMAGLRGHLRQRIHAGGTRNWLLFGERNERYDFLYREELQAWLQQGQLARLDLAFSRDQE 784 G+AGLR HL+ R AG NWL+FGER +D+ +R EL+AW G L RLDLAFSRDQ Sbjct: 379 GLAGLRAHLKARAAAGVRWNWLIFGERTAAHDYFHRAELEAWQASGLLDRLDLAFSRDQA 438 Query: 785 ARVYVQDRLREAAGELRHWLDQGAVLYVCGSLDGMAAGVDAVLTSLLGETGLQDLIEQNR 844 RVYVQ RLRE+A LR W+ GA +YVCGSL+GM+ L +LG L+ L ++ R Sbjct: 439 ERVYVQHRLRESADILRRWVANGAAIYVCGSLEGMSREAHTALVEILGAPMLERLTDEGR 498 Query: 845 YRRDVY 850 YRRDVY Sbjct: 499 YRRDVY 504 >PA4513_1 [S] COG3182 Uncharacterized iron-regulated membrane protein Pae Pseudomonas aeruginosa Length = 395 Score = 323 bits (827), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 173/395 (43%), Positives = 252/395 (63%), Gaps = 4/395 (1%) Query: 3 KKIWFQLHWFIGITAGTVLMTIGVTGALLAFREEIMDLLSPGVMHVQVRQQATLTPQQVL 62 KK+WFQLHWF GI+AG VL +GVTGA L+F++E+M L+P V+ VQ R + L +++ Sbjct: 2 KKVWFQLHWFFGISAGLVLALMGVTGATLSFQDELMRALNPDVLVVQKRPEGVLPLDELV 61 Query: 63 EKLRQEEPQRRITTMTLSAEPGDSVRVVFAPPPGERRGQARYVDPYTGALLPPVTGMEFF 122 ++ EP R++ + + + + R+ + PPPG+RRG++R++DPYTGA + G FF Sbjct: 62 RRIEGAEPGRKVAFVWVEMDSDKAGRIFYTPPPGQRRGESRWIDPYTGAFVGEPRGEGFF 121 Query: 123 EFTERFHRWLLLPTEIGKIVLGTLALCLLMLALSGLYLRWPRRALSLRAWLRLDFQLQGR 182 + HR+L + E GK V L L+ LSGLYLRWPR+ RAWL LD+ +GR Sbjct: 122 NLMMQLHRFLAM-GEYGKQVTAACTLILIFFCLSGLYLRWPRKVFDWRAWLTLDWSRKGR 180 Query: 183 SLLWNLHSVIGTWSLVMYVIFATTGAYWALDWFKDGVNTLAGETRRAPMA-RGE-GKKKD 240 S W+LH+V GTW L +Y++ A TG YW+ +W+++G+ L + A RG+ G + + Sbjct: 181 SFNWDLHAVAGTWCLALYLLAALTGLYWSYEWYRNGLFKLLDDAPAGQQAQRGKPGGRGE 240 Query: 241 GPNNQTPVALDLTQAWNTFLAKVPD-YQSAQLRLPEQGTQPLQIFFLGHDAPHERARSRM 299 P + P+ +D WN+ D Q+ LRLP G QP +F+ DAPHERA + + Sbjct: 241 RPADAAPLVVDYAAVWNSIRQAGGDRLQAYNLRLPPAGGQPATVFYRLTDAPHERAFNTL 300 Query: 300 VVLPQSGEIKQLERYEDKSTGGRFIAAIYPLHMGTYFGLPGRIIMAIASLMMPLFGITGW 359 + P +G++K +RY D+S G + +A++Y LH+G+YFG+ GRI+M +ASL MPLF ITGW Sbjct: 301 TLDPANGQVKSDQRYSDRSFGSQLLASVYALHVGSYFGMAGRILMMLASLAMPLFFITGW 360 Query: 360 MLYLDRRRKKAALRAERAALGEPQQQAGGQLLVAY 394 +LYLDRRRKK A+RA RA LG +G L+ Y Sbjct: 361 LLYLDRRRKKRAVRASRADLGGSAGASGEPWLIGY 395 >BH0609 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein) Bha Bacillus halodurans Length = 607 Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 164/543 (30%), Positives = 241/543 (44%), Gaps = 84/543 (15%) Query: 389 QLLVAYASQTGQAERIALHTAARLRRSGVAVTLQALAQTTAETLRHHPRLLLIASTFGEG 448 ++ + + SQTG A+ +A + L+ G VT+ +++ L+ LL++ ST GEG Sbjct: 68 EVTILFGSQTGNAQGLAENAGKTLKEQGFQVTVSSMSDFKPNQLKKLKNLLIVVSTHGEG 127 Query: 449 DAPDSARGFERRLRQAAGQSLAHLHYAVLALGDRHYTSFCGFGHTLDHGLRQGGAKPMFP 508 D PD+A F L L L Y+VLALGD Y FC G D L GA + P Sbjct: 128 DPPDNALSFHEFLHGRRAPKLEDLRYSVLALGDTSYEFFCKTGKDFDQRLEALGATRLQP 187 Query: 509 LVEVDRMDAAALRKWESELAS-----HGLDAAVSDLLPTSSPTWSSWV--------LVER 555 VE D KW + + G P + + + ++E Sbjct: 188 CVECDLDFEEPAAKWLEGVITRLSEGQGQTVPAQPTAPEAKAVETVYSRKNPFRAEVLEN 247 Query: 556 HHLNAGSQGEPLFHLVLQSADSSQPAPTWQAGALLEVMPRHAPDRVALVLQRLGLDG--A 613 +LN + HL L S T++ G L + P + P+ V L+L L D Sbjct: 248 INLNGRGSNKETRHLELSLEGSGL---TYEPGDALGIFPENDPELVDLLLNELKWDANEV 304 Query: 614 TEVHCRGMRCSLADALAC----SVLP---MQAAAD-----------AQTQAQQLQ----- 650 V +G R L +AL +VL +Q AA+ A AQQL+ Sbjct: 305 VAVDKQGERLPLKEALTSYFEITVLTKKLIQQAAELLDNEKLRALTASENAQQLKAYIDG 364 Query: 651 -----------PLTA--------------RSYSVASAMQDGTVQL-----LVRQQRH-ED 679 P+ A R YS+AS++ ++ VR H D Sbjct: 365 RDLVDFVRDFGPINASPQEFVSILRKMPPRLYSIASSIAANPEEVHLTIGAVRYHAHGRD 424 Query: 680 GLGLASGWLTEYAPLGARLQARLVDNAGFA-PVSADTPAIFIGNGSGMAGLRGHLRQRIH 738 G+ S E G + + N F P S +TP I +G G+G+A R +++R Sbjct: 425 RKGVCSILCAERLQPGDTVPMFIQPNKNFKLPESPETPIIMVGPGTGVAPFRSFMQEREE 484 Query: 739 AGGT-RNWLLFGERNERYDFLYREELQAWLQQGQLARLDLAFSRDQEARVYVQDRLREAA 797 AG T ++W+ FG+++ DFLY+ E Q WL+ G L R+D+AFSRD E +VYVQ R+ E + Sbjct: 485 AGATGKSWMFFGDQHFVTDFLYQTEWQKWLKDGVLTRMDVAFSRDTEEKVYVQHRMLEHS 544 Query: 798 GELRHWLDQGAVLYVCGSLDGMAAGVDAVLTSLLGETG----------LQDLIEQNRYRR 847 EL WL++GAV YVCG MA V L ++ + G L ++ +Q RY+R Sbjct: 545 KELYKWLEEGAVFYVCGDKTNMAKDVQEALLEIIEKEGGKSREEAEAYLAEMKKQKRYQR 604 Query: 848 DVY 850 DVY Sbjct: 605 DVY 607 >VC0384 [P] COG0369 Sulfite reductase, alpha subunit (flavoprotein) Vch Vibrio cholerae Length = 614 Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 168/558 (30%), Positives = 244/558 (43%), Gaps = 81/558 (14%) Query: 371 ALRAERAALGEPQQQAGGQLLVAYASQTGQAERIALHTAARLRRSGVAVTLQALAQTTAE 430 AL + G+ A G+L + +ASQTG A+ +A + +G+ L + + Sbjct: 60 ALSVPHISAGQTASAASGKLTIIFASQTGNAKGVAQALLKEAQAAGIQAQLFDASDYKGK 119 Query: 431 TLRHHPRLLLIASTFGEGDAPDSARGFERRLRQAAGQSLAHLHYAVLALGDRHYTSFCGF 490 L ++ +AST GEG+APD+A L+ L +L Y VL LGD Y FC Sbjct: 120 DLAKETHVIFVASTNGEGEAPDNALALHEFLKSKKAPKLPNLKYGVLGLGDSSYQFFCQT 179 Query: 491 GHTLDHGLRQGGAKPMFPLVEVDRMDAAALRKWESELASHGLDAAVSDLLPTSSPTWSSW 550 G D L GA+ + ++ D AA +W ++ S D TS T++ Sbjct: 180 GKDFDQFLENLGAQRLVERLDADVDYQAAATEWRKQVLSILKDELTGAAAVTSVATFAVS 239 Query: 551 VLVERHH---------------LNAGSQGEPLFHLVLQSADSSQPAPTWQAGALLEVMPR 595 E H+ + G+ + H+ + ADS T+Q G L V Sbjct: 240 QTAESHYSKEQPYTASLSTSQKITGRDSGKDVRHIEIDLADS---GITYQPGDALGVWYE 296 Query: 596 HAPDRVALVLQRLGLDGATEVHCRGMRCSLADAL--------ACSVLPMQAAADAQTQ-- 645 + P V +L +GL G EV G SL AL A L Q A AQ++ Sbjct: 297 NRPQLVNALLDSVGLSGHEEVQVDGETLSLHSALTHHYEITAANPQLVAQFAELAQSEKL 356 Query: 646 ---AQQ--------------------------------LQPLTARSYSVASAMQDG---- 666 AQ L+ LT R YS+AS+ + Sbjct: 357 TSLAQDKEALREYATRTQVIDVLREEKVTLSAIQLLSLLRRLTPRLYSIASSQSEVGEEV 416 Query: 667 --TVQLLVRQQRHEDGLGLASGWLTEYAPLGARLQARLVDNAGFA-PVSADTPAIFIGNG 723 TV ++ + E LG AS +L GA ++ + N F P + P I +G G Sbjct: 417 HLTVGVVEYEYEGEQRLGGASSFLAHQLEEGAPVKVFVEHNNNFKLPSDDNAPLIMVGPG 476 Query: 724 SGMAGLRGHLRQRIHAGGT-RNWLLFGERNERYDFLYREELQAWLQQGQLARLDLAFSRD 782 +G+A R +++R + G +NWLLFG+R DFLY+ E Q +L+ G L RLD+AFSRD Sbjct: 477 TGIAPFRSFIQERENRGAAGKNWLLFGDRTFTQDFLYQVEWQKYLKSGVLNRLDVAFSRD 536 Query: 783 QEARVYVQDRLREAAGELRHWLDQGAVLYVCGSLDGMAAGVDAVLTSLLGETG------- 835 Q +VYVQ RL E A + WL +GA YVCG MA V L +++ + G Sbjct: 537 QHEKVYVQHRLLEQAELVWQWLQEGAYFYVCGDASRMAKDVHQALITVVEQQGGLNREQA 596 Query: 836 ---LQDLIEQNRYRRDVY 850 + +L + RY+RDVY Sbjct: 597 EEYVSELRKAKRYQRDVY 614