BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0072.p         (65 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XF2763 [K] COG3636 Predicted transcriptional regulator Xfa Xylel...    60   9e-10

>XF2763 [K] COG3636 Predicted transcriptional regulator Xfa Xylella
          fastidiosa 9a5c
          Length = 102

 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 1  MTKSISISELPLFDPTPYLDSEEAIVAYLADIRRANDPGLLASALNDVERAR 52
          +TK I++SELP FD   YL SEE + AYL  +   NDP LLA+AL D+ R+R
Sbjct: 3  ITKKINVSELPEFDAAEYLSSEEEVAAYLTAVLEENDPALLAAALGDIARSR 54