BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0045.p (375 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1734 [E] COG3842 ABC-type spermidine/putrescine transport sys... 481 e-135 PA0603 [E] COG3842 ABC-type spermidine/putrescine transport syst... 447 e-125 YPO2846 [E] COG3842 ABC-type spermidine/putrescine transport sys... 395 e-110 BMEII0922 [E] COG3842 ABC-type spermidine/putrescine transport s... 362 1e-99 SMa1754 [E] COG3842 ABC-type spermidine/putrescine transport sys... 349 7e-96 >RSc1734 [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components Rso Ralstonia solanacearum Length = 363 Score = 481 bits (1237), Expect = e-135, Method: Compositional matrix adjust. Identities = 236/358 (65%), Positives = 279/358 (77%), Gaps = 1/358 (0%) Query: 18 DVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE 77 DV+V F GV+KTYDGE L+VK+LDLDI +GEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE Sbjct: 5 DVIVSFRGVRKTYDGETLVVKHLDLDIYQGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE 64 Query: 78 IRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALD 137 IRL+G LLN VPPHKRNIGMVFQNYALFPH+T+AQNV YPL+VRK+ A R +V AL Sbjct: 65 IRLEGTLLNTVPPHKRNIGMVFQNYALFPHLTVAQNVEYPLTVRKLAAAERAERVHHALK 124 Query: 138 MVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKAL 197 MV+M F RYP QLSGGQQQR+ALAR LVF+P+LVLMDEPLGALDKQLREHMQ ELK+L Sbjct: 125 MVRMEGFAKRYPAQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYELKSL 184 Query: 198 HKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNR 257 H++LGVTFVYVTHDQ EALTMSDRVAVFD+GV+QQL V LYE P N FVANFIGD+N Sbjct: 185 HEKLGVTFVYVTHDQGEALTMSDRVAVFDKGVVQQLDTVDRLYESPCNAFVANFIGDSNT 244 Query: 258 FKGSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRLAAGGSAEP-NSI 316 +G+V + G++C ++L DGA + G NV A G + C+RPER+RLA A N++ Sbjct: 245 LRGTVVGLDGDYCQLQLNDGARVIGRNVAGAPVGAAAVGCIRPERMRLAEPADAGAGNAL 304 Query: 317 RASIAGLIYFGDHVRVRCTVAGQEDCFVKLSLSDPALSGLSEGSSVVLHVAQDRLRCF 374 GL+YFGDHVR+RC + Q +CFVK+ L AL + G+ + L A + LR F Sbjct: 305 AGQTRGLVYFGDHVRMRCALPEQAECFVKVPLGTRALESFAPGAPIRLEFAPEHLRVF 362 >PA0603 [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components Pae Pseudomonas aeruginosa Length = 369 Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/342 (64%), Positives = 258/342 (75%), Gaps = 2/342 (0%) Query: 15 QQRDVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPT 74 Q DVLV F GV+K+YDGE LIVK+L+LDIR+GEFLTLLGPSGSGKTT LMMLAGFE PT Sbjct: 5 QGGDVLVSFRGVQKSYDGETLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPT 64 Query: 75 GGEIRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQ 134 GEI L G+ +N VPPHKR+IGMVFQNYALFPHMT+A+N+A+PLSVR M + + +VK+ Sbjct: 65 AGEILLAGRSINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVKERVKR 124 Query: 135 ALDMVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLEL 194 AL MVQ+ F RYP QLSGGQQQRVALAR LVF+PQLVLMDEPLGALDKQLREHMQ+E+ Sbjct: 125 ALSMVQLDAFAGRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEI 184 Query: 195 KALHKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGD 254 K LH+RLGVT VYVTHDQ EALTMSDRVAVF QG IQQ+ P LYE P N FVANFIG+ Sbjct: 185 KHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIEPPRNLYEQPRNTFVANFIGE 244 Query: 255 NNRFKGSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPN 314 NNR G + S GE C V L G + L V+ G+ +T +RPER+RL + N Sbjct: 245 NNRLSGQLLSCDGERCVVGLPRGEKVEALAVNVGQPGEPVTLSIRPERVRLNGASESCVN 304 Query: 315 SIRASIAGLIYFGDHVRVRCTVAGQEDCFVKLSLS--DPALS 354 +A +Y GDHVRVR V G++D FVK ++ DP LS Sbjct: 305 RFSGRVAEFVYLGDHVRVRLEVCGRDDFFVKQPIAELDPTLS 346 >YPO2846 [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components Ype Yersinia pestis Length = 361 Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/358 (55%), Positives = 252/358 (70%), Gaps = 10/358 (2%) Query: 21 VQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGEIRL 80 V F +KK+YDG+ L+VKNL+LDI G+FLTLLGPSGSGKTT LMMLAGFE PT GEI L Sbjct: 5 VSFKNIKKSYDGDKLVVKNLNLDIHEGDFLTLLGPSGSGKTTSLMMLAGFETPTQGEITL 64 Query: 81 DGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALDMVQ 140 + L+ +PPH+R IGMVFQNYALFPHMT+ +N+A+PL++R++++A + K+ + LDMV+ Sbjct: 65 RDKPLHNLPPHQRGIGMVFQNYALFPHMTVTENLAFPLTIRRLNKADIKEKIDRILDMVK 124 Query: 141 MGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKALHKR 200 + DRYP Q+SGGQQQRVALAR LVF+P+LVLMDEPLGALDKQLREHMQLE+K LHK Sbjct: 125 LKNLADRYPAQMSGGQQQRVALARALVFEPKLVLMDEPLGALDKQLREHMQLEIKQLHKM 184 Query: 201 LGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNRFKG 260 L +T VYVTHDQSEA+T+S+RV VF+ G+IQQ+ + +YE P N FVA FIG+NN Sbjct: 185 LELTIVYVTHDQSEAMTLSNRVVVFNDGIIQQMDSPSVIYEQPSNTFVAQFIGENNCLLA 244 Query: 261 SVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRL--AAGGSAEPNSIRA 318 + GE+ L DG L L V + G+ I C+RPER+ + A GS + I+A Sbjct: 245 VNQGSDGEYYRAMLDDGTRLQALKVCPSSPGKKIMLCIRPERVSVNHPAAGSQQ---IKA 301 Query: 319 SIAGLIYFGDHVRVRCTVAGQEDCFVKLSLS--DPALSGLSEGSSVVLHVAQDRLRCF 374 I IY GDHVR+ VAGQ + VKLS + +P GS V+L LR Sbjct: 302 RIQQFIYLGDHVRMMTEVAGQGNFMVKLSAAHIEPH---WQPGSEVLLSWMPAHLRAL 356 >BMEII0922 [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components Bme Brucella melitensis Length = 355 Score = 362 bits (928), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 174/317 (54%), Positives = 233/317 (73%), Gaps = 2/317 (0%) Query: 18 DVLVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGE 77 D +F + K+Y G+ ++ L+LDI RGEF++LLGPSGSGKTT LMMLAGFE P+ G Sbjct: 3 DYRTRFENISKSY-GDFKVIDGLNLDIERGEFVSLLGPSGSGKTTLLMMLAGFENPSSGT 61 Query: 78 IRLDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALD 137 I +DG+ +N VP +KRN+G+VFQNYALFPHMT+A+N+A+PL +R + +A KV + LD Sbjct: 62 IHVDGKSINSVPSYKRNMGVVFQNYALFPHMTVAENIAFPLQMRGVGKAQAAEKVARVLD 121 Query: 138 MVQMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKAL 197 MVQ+ +R P+QLSGGQQQRVALAR LVF+P +VLMDEPLGALDKQLRE MQL+++AL Sbjct: 122 MVQLSAMSERKPSQLSGGQQQRVALARALVFEPHVVLMDEPLGALDKQLREQMQLDIRAL 181 Query: 198 HKRLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNR 257 H RLG+T V+VTHDQSEALTMSDR+AVF++G I+Q+ +Y+ P +FVA FIG+ N Sbjct: 182 HNRLGLTIVFVTHDQSEALTMSDRIAVFNKGKIEQIGSPRAIYDEPQTRFVAEFIGETNL 241 Query: 258 FKGSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPNSIR 317 +G+VESV+G +RL D A+ + R +GQ++ +RPERI L AE N + Sbjct: 242 AEGTVESVEGSRILIRLKDATAIAASSASRPISGQNVLLSIRPERIELGEADGAE-NRLA 300 Query: 318 ASIAGLIYFGDHVRVRC 334 A + +Y GDH+R++ Sbjct: 301 ARVMDSVYQGDHLRIQL 317 >SMa1754 [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components Sme Sinorhizobium meliloti Length = 359 Score = 349 bits (895), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 173/318 (54%), Positives = 228/318 (71%), Gaps = 1/318 (0%) Query: 20 LVQFCGVKKTYDGENLIVKNLDLDIRRGEFLTLLGPSGSGKTTCLMMLAGFEFPTGGEIR 79 +QF + K Y G +V+NL L I +GEF++LLGPSGSGKTT LMMLAGFE PT G I Sbjct: 8 FIQFDRITKFY-GPLCVVENLVLGIGQGEFVSLLGPSGSGKTTLLMMLAGFEQPTSGNIL 66 Query: 80 LDGQLLNRVPPHKRNIGMVFQNYALFPHMTIAQNVAYPLSVRKMDRATREAKVKQALDMV 139 LDG +N VP HKR++G+VFQ+YALFPHM++ +NVA+PL +R + +A V +ALDMV Sbjct: 67 LDGTAINDVPTHKRDMGVVFQSYALFPHMSVGENVAFPLQMRGLGKAEIAECVARALDMV 126 Query: 140 QMGKFGDRYPTQLSGGQQQRVALARTLVFDPQLVLMDEPLGALDKQLREHMQLELKALHK 199 Q+ F DR P+QLSGGQQQRVAL+R LVF+P++VLMDEPLGALDKQLRE MQ +++ LH+ Sbjct: 127 QLSAFADRRPSQLSGGQQQRVALSRALVFEPRVVLMDEPLGALDKQLREQMQFDIRDLHR 186 Query: 200 RLGVTFVYVTHDQSEALTMSDRVAVFDQGVIQQLAPVTELYEYPDNQFVANFIGDNNRFK 259 RLG+T V+VTHDQSEALTMSDRVAVF++G I+Q+ ++Y+ P +FVA FIG+ N + Sbjct: 187 RLGLTIVFVTHDQSEALTMSDRVAVFNRGKIEQIGTPRQVYDEPATRFVAEFIGETNLVE 246 Query: 260 GSVESVQGEHCTVRLTDGAALTGLNVHRAHAGQSITACVRPERIRLAAGGSAEPNSIRAS 319 G VE+VQG+ VRL GA + +GQS+ +RPER+ L+ N + Sbjct: 247 GVVETVQGQEAIVRLPSGAHIVSAGSGSLVSGQSVFLSIRPERVDLSETRGDARNCLETE 306 Query: 320 IAGLIYFGDHVRVRCTVA 337 + +Y GDH+RV+ A Sbjct: 307 VTDSVYQGDHLRVQLQSA 324