BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0403.p (1060 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 295 3e-79 PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa 244 6e-64 all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 244 8e-64 PA4601_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa 242 3e-63 CC0896 Non COG 238 4e-62 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 167/426 (39%), Positives = 246/426 (57%), Gaps = 11/426 (2%) Query: 616 ADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRNGMVAVILMDLDRFKNINDTFGH 675 A+ RIR LAHYD LTGL NR + + + E R G+ + +DLD FK +NDT GH Sbjct: 334 AENRIRQLAHYDTLTGLANRTNFREQLDARLAAPEARLGL---LYIDLDGFKLVNDTKGH 390 Query: 676 ETGEAVLQEIAQRFRNSL-RELDILARVGGDEFIVLVDDFDDPVQLGEIAQKLLTEARKP 734 G+A+L+ +AQR R R +AR+GGDEF VLV DD + +A L+ P Sbjct: 391 RAGDALLERVAQRLRAVCDRPGMAIARLGGDEFAVLVPH-DDADRAATLATALIEALGAP 449 Query: 735 FIIDG-QEAMLSVSIGIATYPGDGDNAQTLIKNADIAMYRAKHHGKDDYRFFSDEINTNT 793 + + Q + SIGIA P G + + L+ ADIA+Y AK GK R F ++ T Sbjct: 450 YALGADQNVRIGASIGIALAPAHGRDTENLLARADIALYAAKAAGKGLARLFCADMETRI 509 Query: 794 VERIALEAELRRAIERAE-FVVHYQPKIELAEGRIVGAEALVRWQHPLRGLLPPGEFITL 852 R LEA+LR A+E + V YQP +++A G++ EALVRW H RG +PP EF+ + Sbjct: 510 QARALLEAQLRAALEHQDRLFVFYQPIVDVATGKVTAREALVRWHHAERGWVPPDEFVPI 569 Query: 853 AEETRLIDQIGLLVLDVACRDIGLMRQQQMTCGRISINLTGSQFGDERLLDDIKEVVDRH 912 AE++ LIDQ+G VL ACR+ + R+++N++ Q G L + + Sbjct: 570 AEQSGLIDQLGRFVLHRACREA----TRWEDGARVAVNVSPMQLGKATLAQTVHAALIDS 625 Query: 913 GTPPSCLEFEITESMVMHNRERAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTL 972 G P LE E+TE+ ++ N + + + G +++DDFGTGYSSLA+L+ FP + + Sbjct: 626 GLAPDRLEIEVTETALIQNEAESFEDLRQLYDMGVRVALDDFGTGYSSLAHLRAFPFDKI 685 Query: 973 KIDKSFINDIPDNPNSSAIVQAIIAMSHALNLKVVTEGVETEKQLQALREFGSDEYQGYY 1032 KID+SF+ D+ + P+S+ +V+AI + L + V EGVET+ ++ +RE G E QGYY Sbjct: 686 KIDRSFVRDLLERPDSAVLVRAIADLGRQLGVTTVAEGVETQAHVRGIREAGCTEAQGYY 745 Query: 1033 FSKPVP 1038 + +P P Sbjct: 746 YGRPAP 751 >PA0575_4 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 267 Score = 244 bits (624), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 119/248 (47%), Positives = 172/248 (69%) Query: 795 ERIALEAELRRAIERAEFVVHYQPKIELAEGRIVGAEALVRWQHPLRGLLPPGEFITLAE 854 ER+ALE ELRRA+ER E ++YQPK+ L G +VGAEALVRW HPL G + P FI LAE Sbjct: 1 ERMALETELRRALERDELQLYYQPKLSLESGLLVGAEALVRWYHPLFGEISPERFIPLAE 60 Query: 855 ETRLIDQIGLLVLDVACRDIGLMRQQQMTCGRISINLTGSQFGDERLLDDIKEVVDRHGT 914 + LI +G VL+ AC+ +G ++ G +S+NL G+Q G +L++ +++++++ G Sbjct: 61 DCGLILPLGDWVLEHACQQMGEWQKLHAPFGPLSVNLAGAQLGQPQLIERLEQLLEQSGL 120 Query: 915 PPSCLEFEITESMVMHNRERAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKI 974 PS L+ EITES +M+ E A+A++ G++ G ++IDDFGTGYSSL+YLKR P++ LKI Sbjct: 121 EPSRLQLEITESFIMNQTEEALAVLHGLKRLGVQLAIDDFGTGYSSLSYLKRLPLDILKI 180 Query: 975 DKSFINDIPDNPNSSAIVQAIIAMSHALNLKVVTEGVETEKQLQALREFGSDEYQGYYFS 1034 DKSFI +PD+P+ +AI +AIIA+ ++ L V+ EGVETE Q L G ++ QG+ S Sbjct: 181 DKSFIRGLPDDPHDAAITRAIIALGRSMQLTVIAEGVETEGQQSFLTHEGCEQIQGFVLS 240 Query: 1035 KPVPYAQF 1042 P+P F Sbjct: 241 PPLPAELF 248 >all4225_2 [T] COG2200 FOG Nos Nostoc sp. PCC 7120 Length = 260 Score = 244 bits (623), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 119/252 (47%), Positives = 169/252 (67%) Query: 795 ERIALEAELRRAIERAEFVVHYQPKIELAEGRIVGAEALVRWQHPLRGLLPPGEFITLAE 854 ER+ALE EL A+ER E VV+YQP I+L +I EALVRWQHP RGL+ P +FI +AE Sbjct: 1 ERLALENELHGALERNEIVVYYQPIIDLQTKQITAVEALVRWQHPTRGLVSPAKFIPIAE 60 Query: 855 ETRLIDQIGLLVLDVACRDIGLMRQQQMTCGRISINLTGSQFGDERLLDDIKEVVDRHGT 914 LI +IG VL AC + + R+S+NL+ QF + L++ + E++ G Sbjct: 61 ANGLIVEIGEWVLRTACLQNRTWQLAGLPPIRMSVNLSARQFEESNLVELVSEIIQESGL 120 Query: 915 PPSCLEFEITESMVMHNRERAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKI 974 PS LE E+TES +M + +R++ I+ +R G +++DDFGTGYSSL YLKRFPVN LKI Sbjct: 121 HPSYLELEVTESSLMTDIQRSVTILKQLRELGVWLALDDFGTGYSSLNYLKRFPVNMLKI 180 Query: 975 DKSFINDIPDNPNSSAIVQAIIAMSHALNLKVVTEGVETEKQLQALREFGSDEYQGYYFS 1034 D+SF+ D+ NP+S+A+ AIIA++ +L LK+ EG+ET++QL L++ G E QGYYF Sbjct: 181 DRSFVQDVCSNPDSAAVTNAIIALAKSLQLKITAEGIETQQQLSYLQKRGCQEGQGYYFG 240 Query: 1035 KPVPYAQFVQLL 1046 P P + +++L Sbjct: 241 IPAPAKEIMEIL 252 >PA4601_3 [T] COG2200 FOG Pae Pseudomonas aeruginosa Length = 247 Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 113/237 (47%), Positives = 162/237 (68%) Query: 811 EFVVHYQPKIELAEGRIVGAEALVRWQHPLRGLLPPGEFITLAEETRLIDQIGLLVLDVA 870 EFV+HYQP+ R+ GAEAL+RWQHP RGL+PP EFI + EE L+ Q+G +L A Sbjct: 1 EFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEA 60 Query: 871 CRDIGLMRQQQMTCGRISINLTGSQFGDERLLDDIKEVVDRHGTPPSCLEFEITESMVMH 930 C+ + + ++ ++S+NL+ QF D +L + I ++ G PP+CLE E+TES++M Sbjct: 61 CKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMS 120 Query: 931 NRERAIAIMDGIRAEGFTISIDDFGTGYSSLAYLKRFPVNTLKIDKSFINDIPDNPNSSA 990 + A+ I+ G++ G I++DDFGTGYSSL YLK+FP++ LKID+SF++ +P + Sbjct: 121 DVAEAMQILSGLKRLGLAIAVDDFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQ 180 Query: 991 IVQAIIAMSHALNLKVVTEGVETEKQLQALREFGSDEYQGYYFSKPVPYAQFVQLLA 1047 I +AIIAM+H+LNL V+ EGVE++ QL LRE G DE QGY F +P+P QF L A Sbjct: 181 IARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYA 237 >CC0896 Non COG Length = 677 Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 148/445 (33%), Positives = 230/445 (51%), Gaps = 6/445 (1%) Query: 595 EYLQLANIAADLASVAIESRRADERIRHLAHYDELTGLPNRFLCTQHVSNAITHAEHRN- 653 E+ L L A E+RR + LA+ D LT LPNR + + A Sbjct: 200 EFSDLVQSRVTLTQKAEEARRLSDENDRLANLDSLTDLPNRRRYFAELDARVEAARQSGR 259 Query: 654 GMVAVILMDLDRFKNINDTFGHETGEAVLQEIAQRFRNSLRELDILARVGGDEFIVLVDD 713 G VA ++ DLD FK IND FGH TG+ +L E+ +R + + AR+GGDEF +++D Sbjct: 260 GFVAGVI-DLDDFKPINDAFGHATGDRLLIEVGRRLKAFDGAPILAARLGGDEFGLIIDA 318 Query: 714 FDDPVQLGEIAQKLLTEARKPFIIDGQEAMLSVSIGIATYPGDGDNAQTLIKNADIAMYR 773 +P L + ++L + + + G A + SIG +P D ++ L + AD A+Y Sbjct: 319 ALEPDALRVLGRELCASLQATYDLRGVRAQVGASIGFCPFPSGADTSEQLFERADYALYH 378 Query: 774 AKHHGKDDYRFFSDEINTNTVERIALEAELRRAIERAEFVVHYQPKIELAEGRIVGAEAL 833 AK +GK F + + +E LR A E VH+QP +++ R + EAL Sbjct: 379 AKQNGKGAAVVFDERHEAAIRDMAVVEQALRSADLEQEMSVHFQPLVDIVSQRTIALEAL 438 Query: 834 VRWQHPLRGLLPPGEFITLAEETRLIDQIGLLVLDVACRDIGLMRQQQMTCGRISINLTG 893 RW P G + P FI AE + I +I L++ A R+ MR M R+SINL+ Sbjct: 439 ARWTSPEIGPIRPDVFIGAAERSGQIVEITRLLVAKALRE---MRAWPMDV-RVSINLSA 494 Query: 894 SQFGDERLLDDIKEVVDRHGTPPSCLEFEITESMVMHNRERAIAIMDGIRAEGFTISIDD 953 + + +V P ++FEITE+ ++ + ++A + G ++DD Sbjct: 495 RDIASMENVRRLLAIVSESCIAPHRIDFEITETAIVCDFDQARDALAAFHELGVRTALDD 554 Query: 954 FGTGYSSLAYLKRFPVNTLKIDKSFINDIPDNPNSSAIVQAIIAMSHALNLKVVTEGVET 1013 FGTG+SSL++L+ P++ LKID SF++DI NP S IV+ ++ + L ++ V EGVET Sbjct: 555 FGTGHSSLSHLRLLPLDKLKIDASFVSDIEHNPTSEDIVRTVLQLGRNLRMECVVEGVET 614 Query: 1014 EKQLQALREFGSDEYQGYYFSKPVP 1038 E Q + G+ QGY+F++P+P Sbjct: 615 EAQRDRVAALGATVMQGYHFARPMP 639