BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0225.p (1093 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc3122_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, ... 933 0.0 mlr5175_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, ... 780 0.0 CC3176_1 Non COG 696 0.0 RSc3122_2 [C] COG1014 Pyruvate Rso Ralstonia solanacearum 266 3e-70 mlr5175_2 [C] COG1014 Pyruvate Mlo Mesorhizobium loti 248 5e-65 >RSc3122_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Rso Ralstonia solanacearum Length = 762 Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/717 (63%), Positives = 541/717 (75%), Gaps = 15/717 (2%) Query: 14 LAPVSLDDKYTATTGAIYLSGIQALVRLPLLQQIRDRAAGLNTAGFISGYRGSPLGGLDE 73 L VSLDDKYT G IY+SG QALVRLP+LQQ RDR AGLNTAGFISGYRGSPLG LD+ Sbjct: 13 LETVSLDDKYTLERGRIYISGTQALVRLPMLQQERDRIAGLNTAGFISGYRGSPLGALDQ 72 Query: 74 ALWHAQPHLAAHRVKFQPGVNEDMAATAVWGTQQVKLIGPSDYDGVYAMWYGKGPGVDRC 133 ALW AQ HL+ H + FQ G+NED+AAT+VWG+QQV L + +DGV+ MWYGKGPGVDR Sbjct: 73 ALWKAQKHLSGHNIVFQAGLNEDLAATSVWGSQQVNLYPSARFDGVFGMWYGKGPGVDRT 132 Query: 134 GDVLKHMNHAGTSAHGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDL 193 DV KH N AG+SAHGGVL++AGDDH SSTL HQS+H+F A+ IP+LYP NVQEYLD Sbjct: 133 IDVFKHANSAGSSAHGGVLVLAGDDHACKSSTLAHQSEHVFKAAGIPVLYPSNVQEYLDY 192 Query: 194 GLHGWAMSRYSGCVVGFKALADTVESSASVDADPFRVQIRLPSDFVMPEGGLNARLSTDT 253 GLHGWAMSRYSG V K + D VESSASVD DP R +I LP DFVMP GGLN R Sbjct: 193 GLHGWAMSRYSGLWVAMKCVTDVVESSASVDVDPHRAEIVLPEDFVMPAGGLNIRWPDPP 252 Query: 254 LGVQARKQEALMQDYKIYAALAYARANRLNRVMIDSPKARLGIIASGKSYLDVLEALSEL 313 L QEA + DYK YA LAY RAN+L+RV++DSP+AR GI+ +GK+YLDV +AL +L Sbjct: 253 L-----VQEARLLDYKWYAGLAYVRANKLDRVVLDSPQARFGIMTAGKAYLDVRQALVDL 307 Query: 314 GIDEAFAAEIGLRLFKVSMPWPLEPDGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNWR 373 G+D+ IG+RL+KV WPLE G R FA+GL EILVVEEKRQ++EYQLKE+LYN+R Sbjct: 308 GLDDETCRRIGIRLYKVGCVWPLEAHGARAFAEGLQEILVVEEKRQILEYQLKEELYNYR 367 Query: 374 DDVRPRVIGKFDEK----GEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHT-SDL-- 426 DDVRPRV GKFDE+ GEW P G WLL + + S A IAR IA R+ +F SD+ Sbjct: 368 DDVRPRVYGKFDERDNAGGEWSVPMGNWLLPAHYELSPALIARAIATRLEKFELPSDVRA 427 Query: 427 -IKARLAFLDAKDAVLSKAVNTPPRPAYYCSGCPHNSSTRVPEGSFALAGIGCHVMATAI 485 I+AR+A +DAK+ L+K T R ++CSGCPHN+ST VPEGS ALAGIGCH M + Sbjct: 428 RIEARIAIIDAKEKALAKPRITAERKPWFCSGCPHNTSTNVPEGSRALAGIGCHYMTVWM 487 Query: 486 YPEFNKLTTHMGGEGAPWIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAVAAKVNMTYK 545 N + MGGEG WIGQ PFS HVFANLGDGTY+HSG LAIRA++AAKVN+TYK Sbjct: 488 DRSTNTF-SQMGGEGVAWIGQMPFSGDKHVFANLGDGTYYHSGLLAIRASIAAKVNITYK 546 Query: 546 ILYNDAVAMTGGQPVDGTVSVPMIAQQMAAEGVQRIALVSEDPGRYANRSSLPAAVTVHD 605 +LYNDAVAMTGGQPVDG +SVP IA Q+ AEG RI +V+++P +Y LP VTVH Sbjct: 547 LLYNDAVAMTGGQPVDGPLSVPQIAAQVHAEGTSRIVIVTDEPEKYNAAIKLPEGVTVHH 606 Query: 606 RKDMDAVQRELRELPGVTVIIYDQTCAAEKRRRRKKGDYPDPNERLFINAAVCEGCGDCG 665 R +DA+QRELRE+PG +V+IYDQTCA EKRRRRK+G DP R FIN AVCEGCGDC Sbjct: 607 RDRLDAIQRELREVPGTSVLIYDQTCATEKRRRRKRGTMADPARRAFINDAVCEGCGDCS 666 Query: 666 VQSNCTSILPLETDLGRKRVIDQSSCNKDYSCVKGFCPSFVTVTGGKLRKSRT-GVS 721 V+SNC S+ PLET+LG KR I+QSSCNKD+SCV GFCPSFVT G ++RK + GVS Sbjct: 667 VKSNCLSVEPLETELGTKRKINQSSCNKDFSCVNGFCPSFVTAEGAQVRKPESRGVS 723 >mlr5175_1 [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits Mlo Mesorhizobium loti Length = 724 Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/725 (54%), Positives = 520/725 (71%), Gaps = 21/725 (2%) Query: 12 VPLAPVSLDDKYTATTGAIYLSGIQALVRLPLLQQIRDRAAGLNTAGFISGYRGSPLGGL 71 + L V+LDDK+ I+LSG QA++R+ L+Q+ RDR AGLNTAGF+SGYRGSPLGGL Sbjct: 1 MTLHDVALDDKFDLGKERIFLSGAQAVIRMLLMQRERDRRAGLNTAGFVSGYRGSPLGGL 60 Query: 72 DEALWHAQPHLAAHRVKFQPGVNEDMAATAVWGTQQVKLIGPSDYDGVYAMWYGKGPGVD 131 D LW A+ LA + FQPG+NE++AATA WG+QQ +L+G +DGV+++WYGKGPGVD Sbjct: 61 DMQLWKAKKQLAGADIVFQPGLNEELAATACWGSQQTELLGEGTHDGVFSVWYGKGPGVD 120 Query: 132 RCGDVLKHMNHAGTSAHGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYL 191 R GDV +H N AG+S HGGVL + GDDH A SST H ++ +F +M+P+L P VQE + Sbjct: 121 RSGDVFRHANLAGSSKHGGVLALMGDDHMAESSTNAHATEFLFVDTMVPILNPAGVQEII 180 Query: 192 DLGLHGWAMSRYSGCVVGFKALADTVESSASVDADPFRVQIRLPSDFVMPEGGLNARLST 251 D GL+G+AMSR++G K + D +ES+ASVDA R+ I +P +F MP GGLN R Sbjct: 181 DYGLYGFAMSRFAGTWAAIKCVKDNIESTASVDASLERLNIVVP-EFDMPPGGLNIRHEI 239 Query: 252 DTLGVQARKQEALMQDYKIYAALAYARANRLNRVMIDSPKA-RLGIIASGKSYLDVLEAL 310 D LG QE + +YK AA A+ AN LNR++ + +LGII GKSYLDV +AL Sbjct: 240 DMLG-----QEERLHEYKRAAASAFIHANGLNRIVYSGGRNPKLGIITLGKSYLDVRQAL 294 Query: 311 SELGIDEAFAAEIGLRLFKVSMPWPLEPDGVREFAQGLDEILVVEEKRQMVEYQLKEQLY 370 ++GIDEA A IG+RLFKV PWPL+ + EFA+GLD I+VVEEKR ++E QL+E LY Sbjct: 295 EDIGIDEAAANRIGIRLFKVGCPWPLDLQHIAEFARGLDTIVVVEEKRSLIEVQLRESLY 354 Query: 371 NWRDDVRPRVIGKFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIAR-FHTSDLIKA 429 +P ++GK DE RG+WL +K +IA + RI + S+ I A Sbjct: 355 GTAS--QPVIVGKKDE-------RGDWLFPAKGALDPNEIAIALGERIVKTIGPSEEISA 405 Query: 430 RLAFLDAKDAVLSKAVNTPPRPAYYCSGCPHNSSTRVPEGSFALAGIGCHVMATAIYPEF 489 R+ L A+L+ A + R ++CSGCPHNSST+VP+GS A AGIGCH MA ++ + Sbjct: 406 RVGKLRQFQAMLADATDIGSRTPFFCSGCPHNSSTKVPDGSIAAAGIGCHFMA--LWMDR 463 Query: 490 NKLT-THMGGEGAPWIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAVAAKVNMTYKILY 548 N L T MGGEGA W+GQAPFSK H+F NLGDGTY HSG LAIR A++++ N+TYKILY Sbjct: 464 NTLGFTAMGGEGAQWVGQAPFSKRGHIFQNLGDGTYNHSGTLAIRFALSSEANITYKILY 523 Query: 549 NDAVAMTGGQPVDGTVSVPMIAQQMAAEGVQRIALVSEDPGRYANRSSLPAAVTVHDRKD 608 NDAVAMTGGQP +G ++V MIA+Q+ AEGV RIA+V+++P +YA ++ PA T+H R D Sbjct: 524 NDAVAMTGGQPHEGGLTVDMIARQVRAEGVDRIAIVTDEPDKYAGKADFPAGATIHHRDD 583 Query: 609 MDAVQRELRELPGVTVIIYDQTCAAEKRRRRKKGDYPDPNERLFINAAVCEGCGDCGVQS 668 +D VQRELR++ GV++++YDQTCAAEKRRRRK+G +PDP++R+FIN +CEGCGDCGVQS Sbjct: 584 LDLVQRELRDVKGVSILLYDQTCAAEKRRRRKRGTFPDPDKRVFINELICEGCGDCGVQS 643 Query: 669 NCTSILPLETDLGRKRVIDQSSCNKDYSCVKGFCPSFVTVTGGKLRKSRTGVSRQEERDD 728 NC SI P+ET+ GRKR IDQSSCNKD+SCV GFCPSFVTV G K+RK+ G++ + + D Sbjct: 644 NCVSIQPVETEFGRKRRIDQSSCNKDFSCVNGFCPSFVTVHGAKIRKAE-GLAGKTDPLD 702 Query: 729 FGPLP 733 P P Sbjct: 703 GVPTP 707 >CC3176_1 Non COG Length = 715 Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/696 (52%), Positives = 468/696 (67%), Gaps = 21/696 (3%) Query: 28 GAIYLSGIQALVRLPLLQQIRDRAAGLNTAGFISGYRGSPLGGLDEALWHAQPHLAAHRV 87 G +++G+QAL+R+ L ++ DR AGLNT G++SGYRGSPLGGLD+ + L AH V Sbjct: 5 GRAFITGVQALLRVLLDRKRLDRKAGLNTGGYLSGYRGSPLGGLDQQAARIKKLLTAHDV 64 Query: 88 KFQPGVNEDMAATAVWGTQQVKLIGPSDYDGVYAMWYGKGPGVDRCGDVLKHMNHAGTSA 147 FQ G+NED+AATAVWG+QQ L + YDGV+ MWYGK PGVDR GDV KH N AGT Sbjct: 65 VFQEGLNEDLAATAVWGSQQANLFPGALYDGVFGMWYGKAPGVDRTGDVFKHANFAGTFP 124 Query: 148 HGGVLLVAGDDHGAYSSTLPHQSDHIFSASMIPMLYPCNVQEYLDLGLHGWAMSRYSGCV 207 GGVL VAGDDHG SSTLP QS+ F +P+L P +VQE LD GL G +MSR+SG Sbjct: 125 TGGVLAVAGDDHGCKSSTLPSQSEFAFQDFEMPVLSPADVQEVLDYGLLGISMSRFSGLW 184 Query: 208 VGFKALADTVESSASVDADPFRVQIRLPSDFVMPEGGLNARLSTDTLGVQARKQEALMQD 267 G ALADT++S ++D R QI +P +F P GGL R Q ++E M+ Sbjct: 185 TGMIALADTMDSGVTIDVSLDRHQIVVP-EFAFPPGGLGIRQKD-----QPMEKERRMRL 238 Query: 268 YKIYAALAYARANRLNRVMIDSP-----KARLGIIASGKSYLDVLEALSELGIDEAFAAE 322 +KI AALA+ARAN ++RV++ + KARLGI+ G++Y DVLEA + +G+ AA+ Sbjct: 239 HKIPAALAFARANNIDRVVLGASHVKVGKARLGIVCQGQAYKDVLEAFTAMGMTLQEAAD 298 Query: 323 IGLRLFKVSMPWPLEPDGVREFAQGLDEILVVEEKRQMVEYQLKEQLYNWRDDVRPRVIG 382 +G+ ++KV MPWPLEP G+R FA GL+ ++V+E KR ++E Q + LY+ RPRVIG Sbjct: 299 LGVSIYKVGMPWPLEPLGLRAFAAGLETLMVIEHKRALIEPQARAALYDLPAQARPRVIG 358 Query: 383 KFDEKGEWVAPRGEWLLTSKADFSVAQIARVIAARIARFHTSDLIKARLAFLDAKD-AVL 441 K DEKG P LL+ SVA+IA I R+ + + +A L + A A + Sbjct: 359 KTDEKG---GP----LLSELGSLSVAEIALAIYDRLPQGPHMERAQAYLNRVSAAGVAAV 411 Query: 442 SKAVNTPPRPAYYCSGCPHNSSTRVPEGSFALAGIGCHVMATAIYPEFNKLTTHMGGEGA 501 S A + +P ++CSGCPHN+ST++PEGS ALAGIGCH MA P L THMGGEG Sbjct: 412 SLAADQARKP-FFCSGCPHNTSTKLPEGSRALAGIGCHYMAGFNDP-MTDLNTHMGGEGL 469 Query: 502 PWIGQAPFSKVPHVFANLGDGTYFHSGYLAIRAAVAAKVNMTYKILYNDAVAMTGGQPVD 561 W+G APF+ HVF NLGDGTY HSG LAIR AVAA N+TYK+LYNDAVAMTGGQ + Sbjct: 470 TWVGAAPFTSEKHVFQNLGDGTYNHSGSLAIRGAVAAGTNITYKLLYNDAVAMTGGQRAE 529 Query: 562 GTVSVPMIAQQMAAEGVQRIALVSEDPGRYANRSSLPAAVTVHDRKDMDAVQRELRELPG 621 + I +Q+AAEGV++ +V ++ RY + L V + R D+ VQ LRE PG Sbjct: 530 SGFTPAQITRQLAAEGVKKTVIVVDELERYQGVNDLAPGVEIFPRSDLMRVQEMLRETPG 589 Query: 622 VTVIIYDQTCAAEKRRRRKKGDYPDPNERLFINAAVCEGCGDCGVQSNCTSILPLETDLG 681 TV++YDQTCA EKRRRRK+G P +R+FIN VCEGCGDC V+SNC S+ PL T+ G Sbjct: 590 TTVLLYDQTCATEKRRRRKRGSMPKATQRVFINPLVCEGCGDCSVKSNCVSVEPLATEFG 649 Query: 682 RKRVIDQSSCNKDYSCVKGFCPSFVTVTGGKLRKSR 717 RKR I+QSSCN+DYSCV+GFCPSF+T+ G + +S+ Sbjct: 650 RKRKINQSSCNQDYSCVEGFCPSFITLEGAESAQSK 685 >RSc3122_2 [C] COG1014 Pyruvate Rso Ralstonia solanacearum Length = 425 Score = 266 bits (679), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 148/271 (54%), Positives = 185/271 (68%), Gaps = 7/271 (2%) Query: 765 MAAHLEGKGASVLDMTGMSQKNGSVTSHVRIAARRDAIRAQRIATGEADLVLGCDMLTAG 824 MAAH+EGKG +VLDM G++QK G+V SHV+I R D I A RIA GEADLV+GCD + + Sbjct: 1 MAAHIEGKGVTVLDMAGLAQKGGAVLSHVQIGERPDTIHATRIAMGEADLVIGCDAIVSA 60 Query: 825 AFDAISKMRPGRTRAVVNLHQQPPGQFARNPDWQFPVEEVKALIVESVGQQADFIDATRL 884 + + +SK++ G+TRA+VN P F +NP+W+FP +A I +VG F DA+ L Sbjct: 61 SDEVLSKVQFGQTRAIVNSAATPTADFIKNPNWRFPGSSAEADIRAAVGDACAFEDASAL 120 Query: 885 ATALMGDSIATNLFMLGYAWQRGELPLTEASLLRAIELNGVAVQANKTAFAWGRRAAVDL 944 A L+GD+I TN +LG+AWQ+G +PLT +LLRAIELNGV+V NKTAF WGR A D Sbjct: 121 AVRLLGDAIYTNPLVLGFAWQKGWIPLTYDALLRAIELNGVSVDKNKTAFEWGRHLAHDR 180 Query: 945 ARVEQI--AVP-AQPVLLHLPQSLDQLIKRRVSLLTDYQDAAYAAQFLEVVEAVRAAEAA 1001 V + A P A+ ++ LP +LD LI RRV LLT YQ+AAYA F VVE VR AEAA Sbjct: 181 EAVLALAGAAPRAKAEVIALPATLDTLIARRVDLLTAYQNAAYADAFRVVVERVRTAEAA 240 Query: 1002 LGGD----RLATAVARNLSRLMAYKDEYGAA 1028 + G L AVARNLSRLMAYKDEY A Sbjct: 241 VAGAGQPLTLTEAVARNLSRLMAYKDEYEVA 271 >mlr5175_2 [C] COG1014 Pyruvate Mlo Mesorhizobium loti Length = 435 Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 146/305 (47%), Positives = 197/305 (64%), Gaps = 17/305 (5%) Query: 752 GGTGVITIGALMGMAAHLEGKGASVLDMTGMSQKNGSVTSHVRIAARRDAIRAQRIATGE 811 GGTGV+T+GA++GMAAHLE KG ++DM G++QK GSV +HVRIA D I A R++ G+ Sbjct: 1 GGTGVVTVGAVLGMAAHLEDKGCGMIDMAGLAQKGGSVFTHVRIARTPDDIHAIRVSAGK 60 Query: 812 ADLVLGCDMLTAGAFDAISKMRPGRTRAVVNLHQQPPGQFARNPDWQFPVEEVKALIVES 871 ADLVLGCD++ +GA ++ +R G T + N + PG+FAR+ D+ P+E +K I + Sbjct: 61 ADLVLGCDLVVSGAKKVLTAVREGHTIFLANTAEIMPGEFARSADFSLPIERLKKAIRAA 120 Query: 872 VG-QQADFIDATRLATALMGDSIATNLFMLGYAWQRGELPLTEASLLRAIELNGVAVQAN 930 G +A F DATR ATAL G+S+ N+FMLG+A+Q G LPL+ ++ RAIELNG AV N Sbjct: 121 AGDDKAHFFDATRTATALFGNSLGANMFMLGFAFQHGGLPLSAEAVERAIELNGEAVAMN 180 Query: 931 KTAFAWGRRAAV--DLARVEQIAVPAQP----VLLHLPQSLDQLIKRRVSLLTDYQDAAY 984 AF WGRRAA D R + AQP + Q+LD++I RRV+ LT YQ+AAY Sbjct: 181 IAAFRWGRRAAHQPDFVR----GLVAQPGRAGETAPVAQTLDEIIARRVAFLTAYQNAAY 236 Query: 985 AAQFLEVVEAVRAAE--AALGGDRLATAVARNLSRLMAYKDEYGAAVRGRLHSQLPSRAP 1042 ++ + + +RAAE A G + A ARNL +LMA KDEY A RL++ S A Sbjct: 237 GKRYADRLTLLRAAETRAVPGSTAVTEAAARNLFKLMAIKDEYEVA---RLYTD-GSFAA 292 Query: 1043 PLGPQ 1047 LG Q Sbjct: 293 ELGKQ 297