BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0223.p (386 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC1350 Non COG 508 e-143 PA0746 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aerug... 502 e-142 BMEI0689 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melite... 442 e-124 mlr1201 [I] COG1960 Acyl-CoA dehydrogenases Mlo Mesorhizobium loti 423 e-118 SMb20753 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium m... 413 e-115 >CC1350 Non COG Length = 379 Score = 508 bits (1307), Expect = e-143, Method: Compositional matrix adjust. Identities = 241/377 (63%), Positives = 293/377 (77%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 MDF LN+DQ+A Q +AR FA G++AP +A WDE HFP+DV+ +A ELGF G+Y E G Sbjct: 1 MDFALNEDQVAIQDAARAFAEGQLAPHSADWDENKHFPVDVLRQAAELGFAGIYVNEDVG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIG 120 G GLSRLDA+++FE L+ AAYLTIHNM SWMI +G L+ ++ +L T I Sbjct: 61 GSGLSRLDASIIFEALSYGDVPVAAYLTIHNMASWMIDRFGSDDLRQRYLPRLTTMELIA 120 Query: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 SYCLTEPGSGSDAA+++TTA+L+ HYVLNG KAFISG G +D+ VVMARTGGEGA+GVS Sbjct: 121 SYCLTEPGSGSDAAAMRTTAKLDGDHYVLNGGKAFISGGGVSDIYVVMARTGGEGAKGVS 180 Query: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 A VV G+S+G E KMGWN+QPT ++FDN +VP + +GQEG+GF FAM GLDGG Sbjct: 181 AFVVEKGMEGLSFGANERKMGWNAQPTAQVNFDNCRVPVANRIGQEGEGFRFAMMGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R+NIA+CS+G AQ ALD A AY++ R QFGRP+ DFQALQFKLADM TEL AAR MVR A Sbjct: 241 RLNIASCSLGGAQFALDTAKAYLETRNQFGRPLKDFQALQFKLADMATELEAARLMVRRA 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A LD+ PEAT CAMAKR ATD GF+V N+ALQLHGGYGY+++YPLER RD+RVHQI Sbjct: 301 AHALDSKHPEATKLCAMAKRFATDAGFQVANDALQLHGGYGYLQDYPLERLVRDLRVHQI 360 Query: 361 LEGTNEIMRVIISRKLL 377 LEGTNEIMRVII+R++ Sbjct: 361 LEGTNEIMRVIIAREMF 377 >PA0746 [I] COG1960 Acyl-CoA dehydrogenases Pae Pseudomonas aeruginosa Length = 387 Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust. Identities = 241/384 (62%), Positives = 302/384 (78%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 MDF+L ++Q +SAR FA E+AP AA WD + HFP++VI A E G+ GLY E DG Sbjct: 1 MDFDLTEEQRLLVESARAFARHELAPKAADWDRDHHFPVEVIRAAAEQGYLGLYIAEEDG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIG 120 GLGLSRL +++FE+LA C +T AY++IHNM +WM+AS+G +LK W L G + Sbjct: 61 GLGLSRLSTSLIFEQLAAGCVATTAYISIHNMAAWMLASFGDAALKEAWLPGLIGGESLA 120 Query: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 SYCLTEP +GSDAA L+T AR E YVL+GSK FISGAGST VL+VMARTG +GARG+S Sbjct: 121 SYCLTEPDAGSDAARLRTRARREGDEYVLDGSKCFISGAGSTQVLIVMARTGEDGARGIS 180 Query: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 +VP +APG+ YG+ E KMGW +QPTRTI+F+ V++PA + +G EGQGF++AMKGLDGG Sbjct: 181 CFLVPADAPGIRYGRNEDKMGWRAQPTRTITFEGVRIPAGNRIGPEGQGFVYAMKGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R+NIA+CS+GAAQAAL+ + Y++ER+QFG+P+A FQALQFKLADM TEL A+RQMVRL Sbjct: 241 RLNIASCSLGAAQAALEQSMRYVEEREQFGKPLATFQALQFKLADMLTELTASRQMVRLG 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A +LD G EAT YCAMAKR ATD F VCNEALQLHGGYGY+ +YPLER+ RD RVHQI Sbjct: 301 AHRLDRGDAEATLYCAMAKRFATDRCFDVCNEALQLHGGYGYLNDYPLERWVRDTRVHQI 360 Query: 361 LEGTNEIMRVIISRKLLDRDNLDD 384 LEGTNEIMRVI++R+LL++ + D Sbjct: 361 LEGTNEIMRVIVARRLLEQGGMLD 384 >BMEI0689 [I] COG1960 Acyl-CoA dehydrogenases Bme Brucella melitensis Length = 385 Score = 442 bits (1138), Expect = e-124, Method: Compositional matrix adjust. Identities = 212/377 (56%), Positives = 276/377 (73%) Query: 3 FELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGL 62 FELN+DQ A Q+ A+ FAA +AP A +WD + HFP+D++ + G LG G+Y + GG Sbjct: 9 FELNEDQCAIQEMAQAFAADRIAPQALQWDRDKHFPVDILRETGPLGMGGIYVRDDVGGS 68 Query: 63 GLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIGSY 122 GL RLDA ++FE LA AC + +A+L+IHNM +WMI ++G + ++ QL + + SY Sbjct: 69 GLKRLDAVLIFEALATACPTFSAFLSIHNMAAWMIDTFGNEEQRQRFLPQLTSMEWLASY 128 Query: 123 CLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVSAI 182 CLTEPGSGSDAA+LKT A + HY++NG+K FISGAGSTD+ V M RTG +G +G+S + Sbjct: 129 CLTEPGSGSDAAALKTRAVRDGDHYIVNGAKQFISGAGSTDLYVTMVRTGEDGPKGISTL 188 Query: 183 VVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGGRI 242 VVP +APG+S+G E KMGWN+QPTRT+ FDN +VP ++ LG EG GF AM GLDGGR+ Sbjct: 189 VVPKDAPGLSFGANEYKMGWNAQPTRTVIFDNCRVPVENRLGDEGVGFKIAMPGLDGGRL 248 Query: 243 NIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 NIA CS+G AQAA A Y ERK FG+ I FQALQF+LADM+TEL A+R ++ AA+ Sbjct: 249 NIAACSLGGAQAATAKALEYCAERKAFGQTIDRFQALQFRLADMETELAASRMLLYTAAS 308 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 KLD + +A + AMAKR TD F V NEALQL GGYGY+ +Y +E+ RD+RVHQILE Sbjct: 309 KLDRKTHDAGKWSAMAKRFVTDTSFNVANEALQLLGGYGYLHDYGIEKLVRDLRVHQILE 368 Query: 363 GTNEIMRVIISRKLLDR 379 GTNEIMRVII+R ++ R Sbjct: 369 GTNEIMRVIIARHMIGR 385 >mlr1201 [I] COG1960 Acyl-CoA dehydrogenases Mlo Mesorhizobium loti Length = 388 Score = 423 bits (1087), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/377 (55%), Positives = 267/377 (70%) Query: 3 FELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADGGL 62 FELN++Q A Q+ A+ FAA +AP A WD HFP DVI + G LG G+Y + GG Sbjct: 12 FELNEEQRAIQEMAQAFAADRVAPNALDWDRRKHFPADVIRETGPLGLGGIYVRDDVGGS 71 Query: 63 GLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIGSY 122 L RLDA ++FE L+ A +++++IHNMV+ MI +G + ++ +L + + SY Sbjct: 72 ALGRLDAVLIFEALSHADPGFSSFISIHNMVASMIDRFGNDEQRQRFLPKLTSMEWLASY 131 Query: 123 CLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVSAI 182 CLTEPGSGSDAA+LKT A G YVLNG+K FISGAG +DV VM RTG +G +G+S I Sbjct: 132 CLTEPGSGSDAAALKTRAVKSGGDYVLNGAKQFISGAGDSDVYAVMVRTGADGPKGISTI 191 Query: 183 VVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGGRI 242 VVP +APG+S+G E KMGW+ Q TR + F++ KVPA++LL EG GF AM GLDGGR+ Sbjct: 192 VVPKDAPGLSFGANEHKMGWHMQSTRQVIFEDCKVPAENLLSGEGAGFGIAMAGLDGGRL 251 Query: 243 NIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLAAT 302 NIA CS+G AQ+ALD A +Y ERK FG I FQALQF+LADM+TEL AAR + AA+ Sbjct: 252 NIAACSLGGAQSALDKALSYTAERKAFGSKINQFQALQFRLADMETELQAARIFLYAAAS 311 Query: 303 KLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQILE 362 KLD +P+A + AMAKR TD GF V N ALQL GGYGY+ +Y +E+ RD+RVHQILE Sbjct: 312 KLDRKAPDAGKWSAMAKRFVTDTGFNVANNALQLLGGYGYLHDYGIEKLVRDLRVHQILE 371 Query: 363 GTNEIMRVIISRKLLDR 379 GTNEIMRVII+R L+ R Sbjct: 372 GTNEIMRVIIARALIGR 388 >SMb20753 [I] COG1960 Acyl-CoA dehydrogenases Sme Sinorhizobium meliloti Length = 380 Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/379 (53%), Positives = 266/379 (70%) Query: 1 MDFELNQDQLAFQQSARDFAAGEMAPFAAKWDEEAHFPLDVIAKAGELGFCGLYTPEADG 60 MDF L+++Q A + A DFA E+AP A WD++ HFP++ + A LG G+Y + G Sbjct: 1 MDFRLSEEQEAIRTMALDFARDEIAPHAVDWDQQKHFPVETLRAAAALGMAGIYIRDDVG 60 Query: 61 GLGLSRLDATVVFEELARACTSTAAYLTIHNMVSWMIASWGQPSLKAQWCEQLATGRKIG 120 G GL+RLDA ++ E LA C + A++++IHNM + MI +G + + L T + Sbjct: 61 GTGLTRLDAAMIIEALATGCPAIASFVSIHNMCAGMIDRYGTDEQRRRLLPPLLTMDVLA 120 Query: 121 SYCLTEPGSGSDAASLKTTARLEDGHYVLNGSKAFISGAGSTDVLVVMARTGGEGARGVS 180 SYCLTEPGSGSDAA+LKT A E Y+L G K FISGAG + + +VMARTG EG +G+S Sbjct: 121 SYCLTEPGSGSDAAALKTRAVREGDAYLLTGQKQFISGAGESGLYIVMARTGEEGPKGIS 180 Query: 181 AIVVPGNAPGVSYGKKESKMGWNSQPTRTISFDNVKVPADHLLGQEGQGFIFAMKGLDGG 240 A VV +APG+++G E KMGW++QPTR + DNV+V ++ LG EG+GF AM GLDGG Sbjct: 181 AFVVEKDAPGLTFGANEKKMGWHAQPTRAVMLDNVRVSVENRLGAEGEGFRIAMAGLDGG 240 Query: 241 RINIATCSVGAAQAALDAAHAYMKERKQFGRPIADFQALQFKLADMQTELVAARQMVRLA 300 R++IA S+G AQ+A D A AY++ER+ FG+ I +FQALQF+LADM T+L AR + A Sbjct: 241 RLSIAAASLGGAQSAFDKALAYVQERRAFGKAIGEFQALQFRLADMATDLEIARTFLWRA 300 Query: 301 ATKLDAGSPEATTYCAMAKRLATDLGFRVCNEALQLHGGYGYIREYPLERYFRDVRVHQI 360 A LDA PEAT CAMAKR TD F V N+ALQLHGGYGY+ +Y +E+ RD+RVHQI Sbjct: 301 ACALDAADPEATKLCAMAKRFVTDRCFSVANDALQLHGGYGYLADYGVEKIVRDLRVHQI 360 Query: 361 LEGTNEIMRVIISRKLLDR 379 LEGTNEIMR+I+SR ++ R Sbjct: 361 LEGTNEIMRLIVSRAIMGR 379