BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0137.p (476 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSp1200 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 446 e-125 PA2525 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 441 e-123 RSp1599 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 294 2e-79 RSp1114 [MU] COG1538 Outer membrane protein Rso Ralstonia solana... 268 2e-71 PA2837 [MU] COG1538 Outer membrane protein Pae Pseudomonas aerug... 219 8e-57 >RSp1200 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 508 Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust. Identities = 256/472 (54%), Positives = 314/472 (66%), Gaps = 21/472 (4%) Query: 10 LGGCAVGPDYVRPALDLPQAYKET-GPWKLAAPRQIDDHQPWWEAYGDPVLNALMDQANA 68 + CAVGPDY RP+ D+PQ YKET G WK+ P WWE +GD LNAL +Q A Sbjct: 26 MTACAVGPDYKRPSADVPQQYKETAGDWKVGTPSDAITRGKWWEIFGDAQLNALEEQVAA 85 Query: 69 ANQTIQQAAAQYRQAQATAEVARASLWPTIGAQAGAS-----RAQTNTNGVQRLG----- 118 ANQ I A AQYRQAQA + ARA +PTI A A AS R TN +G G Sbjct: 86 ANQNILVAEAQYRQAQALVQSARAQFFPTISASASASRSRSVRTTTNADGSLSTGSPSIT 145 Query: 119 NSYSAGLNASWEADLWGRIRRGAEAGEANAQASAASLAAARLSIQATLAQDYLQLRVTDL 178 N+ S L+ASWE DLWGRIRR E+ +A+A+ASA LA+A LS QATLAQDY QLRVTD Sbjct: 146 NTQSLTLDASWELDLWGRIRRTVESNKASAEASAGDLASALLSAQATLAQDYFQLRVTDT 205 Query: 179 QKDLYRRTVAAYTRSLQLSTHQYEAGTALRSDVAQAETQLRAAQAQLIDLDDTRNQLEHA 238 QK + RRTVA Y R LQL+ +QY G A RSDV A+TQL+ QA L+D + TR QLEHA Sbjct: 206 QKAVLRRTVADYERFLQLTQNQYAVGVAQRSDVLTAQTQLKQTQALLLDAEVTRAQLEHA 265 Query: 239 IAMLIGKAPAQFSLPALPPASASDSAIDANAARLQGSLPQIPVGLPSELLERRPDIANAE 298 IA+LIGK+P+ FSL + A+A + LP IP+ +PS +LERRPDIA AE Sbjct: 266 IAVLIGKSPSAFSLAPVSAATAQELP----------PLPDIPLEIPSTVLERRPDIAAAE 315 Query: 299 RLAAAANANIGVARAAYFPTLTLSASGGYNSLAFANLFNTPSRVWSLGSALAETLFDGGA 358 R A ANANIGVA+AAYFPTLTL AS G ++ + L PSR+WS+G LA TLF+GGA Sbjct: 316 RRVAQANANIGVAKAAYFPTLTLGASAGLSANTLSRLATLPSRIWSIGPTLAATLFEGGA 375 Query: 359 RSARNDAAVAAYDAAVAQYKQTVLGGLQEVEDKLSTLRVLDQESTVQAQAVQSAQLAERL 418 +A + A AAYDAAV Y+QTVLG Q+VED L+ LR QE VQ AVQSAQ A +L Sbjct: 376 LNAAVNKAGAAYDAAVGTYRQTVLGAFQDVEDNLAALRWQAQEFDVQNDAVQSAQEAAQL 435 Query: 419 AMRQYEAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVASVALIKATGGGWQ 470 + +Y AGT+++L V+T QA + T +R +TL G++ A+V L+KA GGGW Sbjct: 436 DLNRYRAGTISFLEVITAQATAYTAERTLLTLQGKRYSAAVLLVKALGGGWH 487 >PA2525 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 498 Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust. Identities = 243/476 (51%), Positives = 307/476 (64%), Gaps = 30/476 (6%) Query: 11 GGCAVGPDYVRPALDLPQAYKETGPWKLAAPRQIDDHQPWWEAYGDPVLNALMDQANAAN 70 GGCA+GPDY RP L +P +KE W+ A PR + WWE YGD LN L +N Sbjct: 17 GGCAIGPDYQRPDLAVPAEFKEAEGWRRAEPRDVFQRGAWWELYGDQTLNDLQMHLERSN 76 Query: 71 QTIQQAAAQYRQAQATAEVARASLWPTIGAQAGASRA---------------QTNTNGVQ 115 QT+ Q+ AQ+RQA+A ARA+ +P+I G +R+ ++ G Sbjct: 77 QTLAQSVAQFRQAEALVRGARAAFFPSITGNVGKTRSGQGGGDSTVLLPGGSTVSSGGSG 136 Query: 116 RLGNSYSAGLNASWEADLWGRIRRGAEAGEANAQASAASLAAARLSIQATLAQDYLQLRV 175 + SYS L+ SWE DLWG++RR EA +A+ ASAA LAA RLS Q+ LAQ+YLQLRV Sbjct: 137 AISTSYSTNLSVSWEVDLWGKLRRQLEANQASLHASAADLAAVRLSQQSQLAQNYLQLRV 196 Query: 176 TDLQKDLYRRTVAAYTRSLQLSTHQYEAGTALRSDVAQAETQLRAAQAQLIDLDDTRNQL 235 D Q L TV AY RSL+++ ++Y AG R+DVAQA TQL++ QAQ IDL R QL Sbjct: 197 MDEQIRLLNDTVTAYERSLKVAENKYRAGIVTRADVAQARTQLKSTQAQAIDLKYQRAQL 256 Query: 236 EHAIAMLIGKAPAQFSLPALPPASASDSAIDANAARLQGSLPQIPVGLPSELLERRPDIA 295 EHAIA+L+G PAQF+LP P AS LP +P +PS+LLERRPDIA Sbjct: 257 EHAIAVLVGLPPAQFNLP--PVASVP-------------KLPDLPAVVPSQLLERRPDIA 301 Query: 296 NAERLAAAANANIGVARAAYFPTLTLSASGGYNSLAFANLFNTPSRVWSLGSALAETLFD 355 +AER +ANA IGVA+AAYFP LTLSA+GGY S + +N +TP+R WS+G A TLFD Sbjct: 302 SAERKVISANAQIGVAKAAYFPDLTLSAAGGYRSGSLSNWISTPNRFWSIGPQFAMTLFD 361 Query: 356 GGARSARNDAAVAAYDAAVAQYKQTVLGGLQEVEDKLSTLRVLDQESTVQAQAVQSAQLA 415 GG ++ D A A YD VA Y+QTVL G +EVED L L VLD+ES VQ +A++SA+ A Sbjct: 362 GGLIGSQVDQAEATYDQTVATYRQTVLDGFREVEDYLVQLSVLDEESGVQREALESAREA 421 Query: 416 ERLAMRQYEAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVASVALIKATGGGWQA 471 RLA QY+AGTV Y VVT QA +L+N+R +TLLG +L ASV LI A GGGW + Sbjct: 422 LRLAENQYKAGTVDYTDVVTNQATALSNERTVLTLLGSRLTASVQLIAAMGGGWDS 477 >RSp1599 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 483 Score = 294 bits (753), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 186/480 (38%), Positives = 269/480 (56%), Gaps = 24/480 (5%) Query: 6 LAALLGGCAVGPDYVRPALDLPQAYKETGPWKLAAPRQIDDHQPWWEAYGDPVLNALMDQ 65 L LL GC++ P Y RPA+D+P ++ PW+ A P PWW+ + DP L+ LM+Q Sbjct: 15 LTTLLTGCSLAPPYARPAMDVPAHWQTEAPWRAAQPADDAPKGPWWQRFNDPQLDRLMEQ 74 Query: 66 ANAANQTIQQAAAQYRQAQATAEVARASLWPTIGAQAGASRAQTNTN---------GVQR 116 A NQ+++ A + QAQA VARA L P + A +R +T+ + + Sbjct: 75 ALHENQSLKVAVSNLEQAQALTRVARAGLLPQVTASTSGARLRTSADRPLSSYSSPTMST 134 Query: 117 LGNSYSAGLNASWEADLWGRIRRGAEAGEANAQASAASLAAARLSIQATLAQDYLQLRVT 176 + N + + S+EADL+GR+R A+ + +AA+L RL + A +A + LR T Sbjct: 135 VQNDFVVRADVSYEADLFGRVRGNIANAAASEEQAAANLENVRLLLAAQVATTWYSLRET 194 Query: 177 DLQKDLYRRTVAAYTRSLQLSTHQYEAGTALRSDVAQAETQLRAAQAQLIDLDDTRNQLE 236 D + D+ ++ +A ++L +++ G A D+AQ + + + Q L R Q E Sbjct: 195 DAEIDVVQQGLALQRKALDFVASRHQDGVASGLDLAQQQALVDSTATQAELLQKQRTQYE 254 Query: 237 HAIAMLIGKAPAQFSLPALPPASASDSAIDANAARLQGSLPQIPVGLPSELLERRPDIAN 296 HA+A LIG F + P L G P IPV LPS+++ERRPD+A Sbjct: 255 HALATLIGTPAPAFHIAPAP---------------LAGQPPVIPVALPSDVIERRPDVAA 299 Query: 297 AERLAAAANANIGVARAAYFPTLTLSASGGYNSLAFANLFNTPSRVWSLGSALAETLFDG 356 AER AAAANA++GVARAA+FP++ L+ G+ S A LF+ PS +WS G+ +A+T+FD Sbjct: 300 AERGAAAANASVGVARAAFFPSIMLNGGAGWESRDLALLFSAPSLLWSFGTQIAQTVFDA 359 Query: 357 GARSARNDAAVAAYDAAVAQYKQTVLGGLQEVEDKLSTLRVLDQESTVQAQAVQSAQLAE 416 G AR D A A Y A+A Y+Q VLG LQEVED LS L+ LD+ + +V+SA+ Sbjct: 360 GRTRARVDFANAGYQGAIANYRQAVLGALQEVEDGLSGLQALDRAAAQARASVESARKVY 419 Query: 417 RLAMRQYEAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVASVALIKATGGGWQAGRDAP 476 +A +YE G T L V+ Q + L NQR AV +LG+QL SV L+KA GG W + P Sbjct: 420 DIASARYEGGLATSLDVIAAQQSLLNNQRTAVQILGQQLTTSVFLVKAAGGDWSHPAEPP 479 >RSp1114 [MU] COG1538 Outer membrane protein Rso Ralstonia solanacearum Length = 508 Score = 268 bits (684), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 192/477 (40%), Positives = 267/477 (55%), Gaps = 40/477 (8%) Query: 17 PDYVRPALDLPQAYKET-------------GPWKLAAPRQIDDHQPWWEAYGDPVLNALM 63 P Y +P + P A+KE G WK A P D WW+ + D L++L Sbjct: 35 PTYEKPDVGTPTAFKEAAQGADAPLAAGEQGKWKTAEPSMPTDGA-WWKLFNDATLDSLE 93 Query: 64 DQANAANQTIQQAAAQYRQAQATAEVARASLWPTIGAQAGASRAQTNTN------GVQRL 117 QA A+ T+ AAA+ QA+A + RA+L+P + A G +R + + G Sbjct: 94 AQAGEASPTLAAAAARVSQARAIVQSNRAALFPELDAGFGPTRQRASAASAGLPVGAPVQ 153 Query: 118 GNSY-SAGLNASWEADLWGRIRRGAEAGEANAQASAASLAAARLSIQATLAQDYLQLRVT 176 +Y A S+EADL+GR+R A +A+A+ A AARLS+QA +AQ Y LR Sbjct: 154 PQTYWRAQTTVSYEADLFGRVRNSVNAADADAERVEALYRAARLSLQADVAQTYFSLRTL 213 Query: 177 DLQKDLYRRTVAAYTRSLQLSTHQYEAGTALRSDVAQAETQLRAAQAQLIDLDDTRNQLE 236 D ++ L RTV +L+L ++ G DVA+A+ +L A++ +D+ R LE Sbjct: 214 DAEEALLARTVVGREEALKLVQRRFSTGDIGELDVARADAELATARSDRLDVARRRALLE 273 Query: 237 HAIAMLIGKAPAQFSLPALPPASASDSAIDANAARLQGSLPQIPVGLPSELLERRPDIAN 296 HA+A L+GKAP+ F+L A P LQ + ++P GLPS LLERRPD+A Sbjct: 274 HALATLLGKAPSGFTLGADP---------------LQAANVRVPPGLPSALLERRPDVAA 318 Query: 297 AERLAAAANANIGVARAAYFPTLTLSASGGYNSLAFANLFNTPSRVWSLG----SALAET 352 AER AAANA IGVARAA+FP L L+ G+ S +L SR W LG +AL+ Sbjct: 319 AERAMAAANARIGVARAAFFPQLQLTGGFGFESHDIGDLLKWSSRTWLLGPLVGTALSLP 378 Query: 353 LFDGGARSARNDAAVAAYDAAVAQYKQTVLGGLQEVEDKLSTLRVLDQESTVQAQAVQSA 412 +FDGGARSA A AAY+ VA Y++ VL +EVED LS LR+L +S VQ AV+++ Sbjct: 379 IFDGGARSAGVKQARAAYEENVANYREAVLVAFREVEDNLSDLRLLADQSKVQDDAVRAS 438 Query: 413 QLAERLAMRQYEAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVASVALIKATGGGW 469 A +L+ +Y AG+V YL V+ + L+ QR AV L G ++ A+V L+KA GGGW Sbjct: 439 TRAAQLSRTRYNAGSVNYLDVIDAERNMLSTQRVAVQLAGGRVNATVGLVKALGGGW 495 >PA2837 [MU] COG1538 Outer membrane protein Pae Pseudomonas aeruginosa Length = 479 Score = 219 bits (559), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 164/487 (33%), Positives = 245/487 (50%), Gaps = 34/487 (6%) Query: 4 LVLAAL-LGGCAVGPDYVRPALDLPQAYKETGPWKLAAPRQIDDH-------QPWWEAYG 55 L++A+L LG C++GPD+ RP P G W L A H WW + Sbjct: 7 LLIASLALGACSLGPDFTRPDRPAP------GEWSLQAAAGNPSHLAAAPLAAQWWTLFD 60 Query: 56 DPVLNALMDQANAANQTIQQAAAQYRQAQATAEVARASLWPTIGAQAGASRAQTNTNGV- 114 D LNAL+ + AN ++ AAA+ +Q++A P++ A R +T + G+ Sbjct: 61 DAQLNALLQRVQRANLDLRSAAARLQQSRAIRRSLGGDALPSVDASGNYQRQRTTSAGLF 120 Query: 115 ---QRLG----NSYSAGLNASWEADLWGRIRRGAEAGEANAQASAASLAAARLSIQATLA 167 + G N AG +ASWE D WGR+RR EA +A +AS L ++S+ A A Sbjct: 121 DPSGKAGKGNYNHALAGFDASWELDFWGRVRRELEAADATVEASENELRDVQVSVLAEAA 180 Query: 168 QDYLQLRVTDLQKDLYRRTVAAYTRSLQLSTHQYEAGTALRSDVAQAETQLRAAQAQLID 227 +DY+QLR + + R + RSL+L+ + G A +VAQA Q+ + +A+L + Sbjct: 181 RDYIQLRGEQNRAAIIRDNLETARRSLELTRTRLANGVATDLEVAQALAQVASMEARLPE 240 Query: 228 LDDTRNQLEHAIAMLIGKAPAQFSLPALPPASASDSAIDANAARLQGSLPQIPVGLPSEL 287 ++ + L +A+ L+G +P L L PA A R GS +PVGLPSEL Sbjct: 241 VEKNQAHLVNALGYLVGASPGSL-LAELGPARA--------IPRPPGS---VPVGLPSEL 288 Query: 288 LERRPDIANAERLAAAANANIGVARAAYFPTLTLSASGGYNSLAFANLFNTPSRVWSLGS 347 +RRPDI AE AA A+IGVA+A ++P +TL+ + G+ SL ++L + R +++G Sbjct: 289 AQRRPDIRRAEARLHAATASIGVAKADFYPRITLNGNFGFESLQLSSLGDWDHRQFAIGP 348 Query: 348 ALAETLFDGGARSARNDAAVAAYDAAVAQYKQTVLGGLQEVEDKLSTLRVLDQESTVQAQ 407 A + +F+GG R + A A Y++TVL QEV+D + + + Sbjct: 349 AFSLPIFEGGRLRGRLELREAQQQEAAIDYQRTVLRAWQEVDDAMHDYAANQRRQERLGE 408 Query: 408 AVQSAQLAERLAMRQYEAGTVTYLSVVTTQAASLTNQRNAVTLLGRQLVASVALIKATGG 467 AV + A + A QY AG V +LSV+ +Q L NQ V + V L KA GG Sbjct: 409 AVAQNRRALQSAREQYRAGAVDFLSVLDSQRQLLDNQEQQVASDEAVSLTLVNLYKALGG 468 Query: 468 GWQAGRD 474 GW D Sbjct: 469 GWSPTSD 475